G79706 (epha8,LOC107654448,LOC107751217,LOC107582396,LOC107654383,LOC107565732)


Basic Information

Item Value
gene id G79706
gene name epha8,LOC107654448,LOC107751217,LOC107582396,LOC107654383,LOC107565732
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056709.1
NCBI id CM032078.1
chromosome length 24513629
location 7372912 ~ 7375674 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU117916
TGTGTCCATTGACTTGAGGTTCTCGGGGTTCCGGATCAGCTTGTCCAGGACCGTGACAATCTGGCAGAATCTGGGCCTTTCGTTGCGGTCTTTCTGCCAGCAGTCCAGCATTAGGGTGTGGAGGGCTCCGGGGCAGCCCATGGGGGCCGGGAGCCGGTAGCCCTCCTCTACGGACTTGATCACCTGtggaaaaaacaatcaaattgGATTAAAAGTTGGGGAATTGCAGTGATTTGTCCGATtgtcttgccttaatgattCTACTGTGACTGATGTTTCTCTATGTTTgtaatgaaatattactacactGTTTGCTGCATATTGCAAAGTACACTAAACACTACctgttaaaaaacaataaataatatgagCAGCATTCGGTGCTGTGCAGGGATTATTGAGAAACAGCAGTATACTACGTTGTTATCTTATAATCACAATATGCACATTTCCCTTAAAACATGTTAtgtgtttaattcagttttgtttacaCATGTAACTGGTTAACTGGTAGTAGTCAAAagcaactatatatatatatatatcacctgTATTATGATTGGACAGAAAAGAGTTGGAACTGAGGATATATTAGAAcataaatagaattttaaacaatattaacaataattgctttttaatttacttacatttttatttttttcaaaacataaaagataaaTTTACTTATTTCTAAATACTTTTTCTTGGTTTATTAAGTGGTTTATTTTAGTAACTTAGATGCTATTACGTTAATGTTTtggatttgtatttttatttctgtataataataataataataataatatttttttttaattgtagttaaaatgtaaaaaaatctgtatctgCTATTTTTTGCTAGTtcttcttttacattttcattaaatttgtttcattttataatttagtttttttgcctgaagttaacattttatcatttttaatatttaaaaaatgttttagtggcctaaaatatttaagttcaAAACTGGGATAATAACTCTGTGTTATATTCTGAAGATATATGCAGCCAATAGTTTGGACCCACATCTCTGTTGGTCAAGTTCCAATATGGCCGTTCTCCATATGACATCACTTCCCACATCACCACTCCGTAACTCCATACGTCACTGGAAGAGGAGAACTTCCGATAGGCGATGGCCTCCGGCGCGGTCCAGCGGATCGGGATCTTCCCTCCCTAAAATCCAACGAAGACGGTAAAAGAGTAAACAGCTCATCTGAAAACACAACCGAGCGCTGTAGAGCATGTCCACAAACTCACGCTGGTGGTGTAGGCTGCGTCAGGGTCGTCCTCCAGCACTCGCGACAGACCGAAGTCTGAAATCTTGCACACCAGATTACTGTTGACCAGAACGTTCCTGGCGGCCAAGTCTCGGTGGACATACCCCAGATCAGCCAAGTAAGTCATGCCAGCTGCTATGCCACGCAGAATCCCAACCAGCTGAATGATGGTGAACTGACCGTCATGTCTCCCTCAGGAAAGAGTCCAAAGAGCCGTTCTCCATGTACTCTGTGATGATCATTACCGGTTTGCCTTGGTAGAGAATgcaaaagaacaagaaaaagatGTCAAGAGATTGGAGAAGTGATGCAAGTGTGAGTGAAGAGAAACAGAACTGTgagtgttcttttctttttacccAACCGAGGGTGAATTATTTAGTGGGTGAAGTGGTGATGTACGTCTATCCGATTGTTATCGTTAAATAAACCCTGACTGGGTCATCAGGACCCCAGCGTGGGGTGAAGTGGTCTACATCAACTTCAAGGGGCACTACTTCCGAAAtggataaagaaacaaaaacacgcAGATAAATTGGCTTGTGTTTGtaagaatgaatatattttttaaaacattattcagaaatacatatatgtgcagaagaaatataatatttaatattttaaacaaacacacatataaaatattataagaaactttaataaaaatagcagttatacaatgtatatatatatatatatatatatatatatatatatatatatatatatatatatatatgcatttaaaatcacattatttcatctttgtttttttattcatatataatacattttataaaatgtaaactaaaacgtATATTAaatagtatgtttttatttgtagattatttatgtattattttatagtttaataattatacataattttatatatatatataatttaatttaaaaatggtaaaatccATTGTCTTAATTTTATCAATATAATtgaatcaataataaaaacaaataagttagtttacaaattatattctagattttggtcacactttatttttaggcTCAATTCTATCtcaatttgctgctcattaacaGTAAGGTCGTTTAAGTAgaattaggaatgtagaatataatcatgcagaatatgtatAATAAGTGCACTTCACTGATAGTCTTGTAAAGTGCTTACTGCGGGTAACAACTCCCTCCAGGTGGATGACGTTGGGGTGGTCGAACTGTGCCATGATGCTGGCTTCTCCCAGGAAATCTCTCCTCTGTTTCTCGGTGTAGCCGGCTTTAAGAGTCTTCAGAGCGACTGGGATATCACGTTTCCCAGGGAGCTTCATCCGGCCATAACACACTTCCCCAAACTCTCCTGAA

Function

symbol description
epha8 Orthologous to human EPHA8 (EPH receptor A8).

NR:

description
PREDICTED: ephrin type-A receptor 8-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU117916 True 2652 lncRNA 0.35 2 7372912 7375674

Neighbor

gene id symbol gene type direction distance location
cldn19 cldn19,LOC107582397,LOC107751184,LOC107565733,LOC107654447 coding upstream 45675 7316449 ~ 7327237 (+)
p3h1 p3h1,LOC107756620,LOC107751183,LOC107654416,LOC107582441 coding upstream 69752 7295280 ~ 7303160 (+)
ap5b1 ap5b1,LOC107756637,LOC107654386,LOC107654446,LOC107751181,LOC107565726,LOC107580479 coding upstream 82603 7286052 ~ 7290309 (+)
wnt4 wnt4a,wnt4,LOC107565731,LOC107654388,LOC107582399 coding upstream 110440 7250585 ~ 7262472 (+)
fbxo2 zgc:175088,LOC107756640,LOC107751236,LOC107654389 coding upstream 219739 7146636 ~ 7153173 (+)
LOC122354656 epha8,LOC107756634,LOC107565732,LOC107654383,LOC107582396,LOC107654448,LOC107751217 coding downstream 85318 7460992 ~ 7478381 (+)
LOC122354605 LOC107756631,LOC107654376,LOC107751186,LOC107654419,LOC107582394 coding downstream 337564 7713238 ~ 7718577 (+)
si:ch211-117k10.3 si:ch211-117k10.3,LOC107654380,LOC107573302,LOC107654420,LOC107751187,LOC107582464 coding downstream 344282 7719956 ~ 7726100 (+)
klhdc8a klhdc8a,LOC107743283,LOC107654360,LOC107581204,LOC107700004,LOC107582463 coding downstream 529612 7905286 ~ 7923424 (+)
slc41a1 slc41a1,LOC107654373,LOC107698497,LOC107751220,LOC108254937 coding downstream 556931 7932605 ~ 7957674 (+)
G79707 NA non-coding upstream 539 7349535 ~ 7372373 (+)
G79690 NA non-coding upstream 92492 7278412 ~ 7280420 (+)
G79689 NA non-coding upstream 96565 7265243 ~ 7276347 (+)
G79659 LOC107592898,LOC107751174,LOC107592897,LOC107654393 non-coding upstream 501298 6869252 ~ 6871614 (+)
G79639 LOC107654393,LOC107592868,LOC107751174,LOC107654440 non-coding upstream 514326 6848367 ~ 6858586 (+)
LOC122354645 NA non-coding downstream 110536 7486210 ~ 7498189 (+)
G79748 NA non-coding downstream 454279 7829953 ~ 7830311 (+)
G79813 NA non-coding downstream 498115 7873789 ~ 7880398 (+)
G79863 LOC107751197,LOC107697444,LOC107582459,LOC107694863,LOC102793523,LOC103359687 non-coding downstream 826049 8201723 ~ 8202344 (+)
G79864 NA non-coding downstream 828832 8204506 ~ 8204923 (+)
G79640 per3,LOC107751173,LOC107756610,LOC107654358 other upstream 548367 6818545 ~ 6824545 (+)
megf6b megf6b,megf6,LOC107712944,LOC107582451,LOC108431627,LOC107592884,LOC107657979 other upstream 2026080 5286439 ~ 5346832 (+)
samd13 samd13,LOC107592550 other upstream 2988933 4375839 ~ 4383979 (+)
prkacba prkacb,prkacba,LOC107745335,LOC107669012,LOC107592581 other upstream 2997524 4368425 ~ 4375388 (+)
adgrl2a adgrl2a,adgrl2 other upstream 3220321 4060929 ~ 4152591 (+)
elk4 LOC107751188,LOC107654379,LOC107756628,LOC107654450,LOC107582393,LOC107573300 other downstream 352113 7727787 ~ 7741441 (+)
bsnb LOC107743257,LOC107694876,LOC107579790,LOC107697600,LOC107751196,LOC107582388 other downstream 699745 8075419 ~ 8150569 (+)
G79889 LOC107751201,LOC107697072,LOC107743253,LOC107578868,LOC107694869 other downstream 905141 8280815 ~ 8282901 (+)
G80058 LOC107743242,LOC107659551,LOC107575478,LOC107685987,LOC107582425,LOC107751213 other downstream 1226513 8602187 ~ 8604284 (+)
G80095 grm2b,LOC107715788,LOC107575639,LOC107659540,LOC107718191,LOC107685980,LOC107582373 other downstream 1442716 8818390 ~ 8819279 (+)

Expression


Co-expression Network