G79947 (LOC107694876,LOC107743257,LOC107579790,LOC107751196)


Basic Information

Item Value
gene id G79947
gene name LOC107694876,LOC107743257,LOC107579790,LOC107751196
gene type unknown
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056709.1
NCBI id CM032078.1
chromosome length 24513629
location 8092400 ~ 8143620 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU118263
CCAAATGTGAAaggattaaatgtaaaacataccTAAAGGAGCagaataaaaatagcataaatgGTAAGGCACCAAGATATTAGTGAAAACTTACCATAGCAGCAGCTGGCTGGGCAGTGGGTGGTCCTCCTGGCTGTTGTCTTGCCTGTGCTGGAGCCTGACCTGGCTTAGATTGTTGCTGAGTTGTACCTGTTCCCATGCTAGCAGCTGTGGTTGTGGACTGAGTTGCTCCTATTGTGGTTGCTGGCTGTTGCCCGGGTTGTTGTGGTGGCTGCTGCTGTGTTCGAGTTGTTTGTCCCAGTTGCTGTTGTCCTTGCTGCCCTGTCTCAGGTGGCTGAGGCCCTGTTTGTTTGGCAGACATTTGCTGGCCTGCTGTAGATCGCTGCTGTCCTTGCTGCAATTGTGGCTGCTGCTCTCCAAGACCCTGCTGTGGCCTGGAACCTGAAGAGGGCTCCTGCCTTCTCGATGAGCCTGGCTGCCTTTGCCCCCGTTGTCCACTTGAGCCATGGTGGTGGCTTGATGGGTCACGTGAGTAGTCACCGGAGTCTCGGTGGCTTGCAGATCGTGGATCGGAGGATCTTTTCTGTGTGGAGGATGAAGTGACACGGCCGTCTGTGCGGTTGGAAGGATCTTTTGGATGTGATCGTGAAGAACGAGATGACCTGGGATCATCTGATGAATGACGGGAAGAAGAGTGTCTTCCTGAACTGCTGCCATGGTGACGGTGTTCTCGAGATGAGGTGGAAGAGGAATGTCGTTGATGTCCATACTCATCTTGAGGCCACAGATCTTCTTCAGGAGGCTCATCATAATCATGGTAAGTGTGCTTTACATTGCTCCTCCTGCTAGAGGATGAGTGACTTCCACTCCCATGGTGTCTAGAGCGATCTGAACGTGGTTCACGTGGTTTTTCAAACCAGTCTGTCTCCTCCTGTCCCAAATGATAGGCTTTTTGGGAAATGAAGGGAGAAAGTCAATACTTTGTGCTGTTGCAAAAACCTGGATATGAACTCAATAAAGCCATGCAATGCTCAAGTCCCAAAAAAAcagttgaagaaaaaaaaggaagccAACAAAAACAGCCATCAACACGAATAACTAAAAGACAAAATGTACTGACATCTGAATCACACCATGCAGTTCATGCAAAAAGGCATATATGGTTTCATGCACTGATTAAAGCATTTACATACAACAGTAGTCCAATCGATTGTTCTCTCTACCTTCAAAGCCAGATCATTGGCATGCAAgcttttaattgttgtttaacaagcaatttttaaattcagcacCAGTTACCTTCACTGTCTGAAACAGCACAGTGCATGTCATCTGCAAGGTAAGGGTCATCTGGCTTGTATACATGACTCTTAGGCATATCCCTTATATGGTGGTCCTGTACATCTGGTAAAGAATGACTGGAGCCATACTGATTCCGTACATCATGGGGATCTGGCACAGAGCCACGACCAATTCCCATGGGCTTTCCAACAGGACTCAAGGGACTCTCTTCCTCTGAGTTCTGTGTACGCATAGAAGGACGGCCACTACGACCATGTGTGCCCCTCTGTGATCTTTCCATGGCGTCCCTCTCATAAGACTTACTTCGGTAACCACTTGAatctctggaggaaattttatcCATGCCATAACCTGTTGATCTTGATCGTCCGGATCCATAAAGACGATCATCCTCTTCCAAAGCCTCTCTTGATCCATAGTACTTCTGTTGGTCATAACTCTTTTTCACGCCAGTCCTGGACACCACAGTGCAACTACCACCTGTTGATGTTGTCATGGTGTAGGAGGCTAGATCAGACTCTACATCTCGAGCTTCTTCAATTGGAGAGAACTTGGATATCTTTTGCTCCATTCCTTGCTTCCTATGTTTGCTACGTTTGGATGAAACAGCAGGTGCCAAATTTTTGGATGAGTGTTTTTGGCTTCCCATTCCCCCACTGCTACGGGATGAATGCTTATAGTCATCATAATAATAGCCTGTACCACCACTTACAGTGGTGCTTGAATGTCCATGGCTGTCTACTGCACTTTGATAAGTATTTGAAGCTCTTCCATATAAATTCTCAGAGCCATTGCCATAAGTTGGTCCACGTGGGCCATTCTCACTTCCATAACCTACCCGTGACATGTCAGCAGACCccatgttttcttttgtaagtTCACTGATATCATCAATCATTACATAATTTCTGGGGATATTTTGTTCTAGATTTGTGGCATAGACACCATCTGTTACATATCCTGATGATGGACTTGGGATACGTTCAGTCAGAGGTTGGTCAGAGGGGCGATATTGGCCATAAGCATTGTTCAGGGGTGAAGAATAGACACCACTAAATCCAGTTTCTTGTGCTGATGTTGCTATTGGAACTGAAGGATTACTGATAACTTCATAGTTTGTGGGTAGCTTCTGTTCAAGATCAGCAAGAGAGGTTTGCCTTGGCCTTTGATGAGCAGAAAGCATGTCTGCATGGGGTTGGAAGGAAATGCTCTGTGCAGGATAAGGTAGGGTCTGCCCTGGTAAAGGTGCAGGAGGTGGTTGGAATCCCTGGTGACTGGGCTGCTGCAAACCAAGATCAGACTCATAAGTAGGCTGACCATAACTATGTGTCTGGTATGGCCCTGGGCTCTGATATGATGACGGTTGAGGAGGATGAGGTTGAAAAGTTCCAGGCTGGGGCTGTGAGGAGGTTGGGTAAGGTGTTGTCTGAAACCCAATCTGCTGATAGGCGGCAGTGGGTGGTTGTGTGGGTGTGGGCTGGGCCTGTGGATACTGATATGGAACATATGTGGATGTAGGAGGGTACTGAGATACATTCAAGTCAGTAGTAAACTGATTAAGAGGGGCTGTACTTGGCCGTGACAACATTCCATTTTCTTCATAGGTGCCTGTTGCTACCCCAGCTAGTCGCAAATTATTCAACTCACTGTCTGACATATAGTCACGTGCATCCCCCATGCATCGCAGGTATGCAaactctccctctctctctctctctct

Function

NR:

description
PREDICTED: protein bassoon-like isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU118263 True 3022 TUCP 0.47 2 8092400 8143620

Neighbor

gene id symbol gene type direction distance location
hp1bp3 LOC107694877,LOC107579967,LOC107743260,LOC107751222,LOC107582389,LOC107699409 coding downstream 24939 8060790 ~ 8067461 (-)
sh2d5 sh2d5,LOC107694878,LOC107743262,LOC107580363,LOC107697739,LOC107751244 coding downstream 32341 8054967 ~ 8060059 (-)
kif17 kif17 coding downstream 37562 8047743 ~ 8054838 (-)
LOC122354498 sox13,LOC107580906,LOC107743263,LOC107751191,LOC107582435 coding downstream 72460 7993452 ~ 8019940 (-)
si:ch211-112f3.4 LOC107582165,LOC107654372,LOC107743264,LOC107751241 coding downstream 122794 7961025 ~ 7969606 (-)
il17rc NA coding upstream 63677 8207297 ~ 8216886 (-)
LOC122353662 LOC107743279,LOC107694870,LOC101884647,LOC107579820 coding upstream 87653 8231273 ~ 8233269 (-)
LOC122353737 LOC107582385,LOC107697231,LOC107751199,LOC107694862,LOC107581815,LOC107579335 coding upstream 91168 8234788 ~ 8245729 (-)
LOC122354372 LOC107697231,LOC107694862,LOC107582385,LOC107751199,LOC107751198,LOC107697164,LOC107582384,LOC107751200,LOC107579335 coding upstream 102317 8245937 ~ 8269376 (-)
wnk2 wnk2,LOC107743253,LOC107694869,LOC107751201,LOC107697072,LOC107582379 coding upstream 126574 8270194 ~ 8292985 (-)
G79920 NA non-coding downstream 88038 7954460 ~ 8004362 (-)
G79792 NA non-coding downstream 350902 7677242 ~ 7741498 (-)
LOC122354607 NA non-coding downstream 378697 7711597 ~ 7713703 (-)
LOC122354606 NA non-coding downstream 388639 7701425 ~ 7703761 (-)
G79777 NA non-coding downstream 451214 7638442 ~ 7641186 (-)
G79957 NA non-coding upstream 343 8143963 ~ 8144953 (-)
G79965 LOC107582387 non-coding upstream 41713 8185333 ~ 8191088 (-)
G79968 NA non-coding upstream 59775 8203395 ~ 8204235 (-)
G79969 NA non-coding upstream 74123 8217743 ~ 8218050 (-)
G79970 NA non-coding upstream 74494 8218114 ~ 8218422 (-)
snrpe snrpe other downstream 56849 8028606 ~ 8035551 (-)
LOC122354401 epha8,LOC107756634,LOC107565732,LOC107654383,LOC107582396,LOC107654448 other downstream 655929 7368372 ~ 7436471 (-)
LOC122354641 svbp other downstream 937125 7153465 ~ 7155275 (-)
phf13 LOC107756642,LOC107751178,LOC107582403 other downstream 951164 7131578 ~ 7141236 (-)
vamp3 vamp3 other downstream 1244610 6813625 ~ 6847790 (-)
G79967 NA other upstream 52198 8195818 ~ 8196385 (-)
LOC122354197 LOC107694863,LOC107582459,LOC107751197,LOC107697444,LOC107581824 other upstream 52852 8196472 ~ 8206841 (-)
LOC122353694 NA other upstream 348151 8491771 ~ 8497285 (-)
LOC122354572 NA other upstream 365039 8508659 ~ 8520020 (-)
LOC122354573 NA other upstream 389153 8532773 ~ 8538544 (-)

Expression


Co-expression Network