G80641


Basic Information

Item Value
gene id G80641
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056709.1
NCBI id CM032078.1
chromosome length 24513629
location 10694116 ~ 10694638 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU119253
AgaatttcactttaaaagaGGCAGTTGTATAAACTacttttatgatgattttgtgatgtttgtttgtttgtttttatccacattcagtgtaaatgtgtaaaaaagaacaaacagacCATCcttgaaacatttaattaaaagtcttTTATGTTCTGCAGaaggaagaaagtcatataatTTTGCAATCACATAAGACGGATAGCAGAAtagtcttttattattattattattattattaatttatttacttatttttgtgtTACTACGCCTTTAATGATCCTTAAAAAGGGATGGTTTCTGATGCACTACATTAGTGCCATCTTAAGTgccatatttttcatttatttatgttttaaaacctACATAGCCTTTCAGATAGCCTCCttattatgtgtaaaaaaagttcttttgaATTCACCCTGATAAGCtgcatttaaactttattatcCTTGTGACATGTtcttttgtaaatgtgtgtgctgtgaataTTTTCTATCTGTGTCTTCAAgtggtttataaataa

Function

GO:

id name namespace
GO:0071805 potassium ion transmembrane transport biological_process
GO:0034220 ion transmembrane transport biological_process
GO:0098655 cation transmembrane transport biological_process
GO:0098660 inorganic ion transmembrane transport biological_process
GO:0098662 inorganic cation transmembrane transport biological_process
GO:0055085 transmembrane transport biological_process
GO:0015672 monovalent inorganic cation transport biological_process
GO:0030001 metal ion transport biological_process
GO:0006811 ion transport biological_process
GO:0006812 cation transport biological_process
GO:0006813 potassium ion transport biological_process

KEGG:

id description
ko04080 Neuroactive ligand-receptor interaction
ko04727 GABAergic synapse
ko04742 Taste transduction
ko05032 Morphine addiction
ko05033 Nicotine addiction

RNA

RNA id representative length rna type GC content exon number start site end site
TU119253 True 523 lncRNA 0.28 1 10694116 10694638

Neighbor

gene id symbol gene type direction distance location
rab11a rab11a,LOC105007892,LOC106591986,LOC100698633,LOC106588008,LOC103378951,LOC106562755 coding upstream 428431 10259698 ~ 10265685 (+)
lims1 lims1,LOC107687747,LOC107715819,LOC107572539,LOC104918652 coding upstream 814909 9870254 ~ 9879207 (+)
nxph2b nxph2b,LOC107686003,LOC107551792,LOC107715780,LOC107572939,LOC107687746,LOC107718217 coding upstream 903490 9785040 ~ 9790626 (+)
si:ch211-227n13.3 NA coding upstream 909211 9781131 ~ 9784905 (+)
phka2 phka2,LOC107718215,LOC107715813,LOC107685996,LOC107677496,LOC107573346 coding upstream 913377 9765169 ~ 9780739 (+)
LOC122354282 gmfb,LOC107705437,LOC107553212,LOC107602964,LOC102779377 coding downstream 16810 10711448 ~ 10715250 (+)
LOC122354281 cnih1,LOC107736564,LOC107683416,LOC107553211,LOC106611446 coding downstream 21891 10716529 ~ 10721599 (+)
LOC122354278 LOC107654948,LOC107705440,LOC107736540,LOC107682154,LOC100538248 coding downstream 31513 10726151 ~ 10734638 (+)
LOC122354395 hrasls,LOC107569888,LOC107713876,LOC107693015,LOC108435900 coding downstream 66219 10760857 ~ 10761894 (+)
LOC122353582 NA coding downstream 343505 11038143 ~ 11042220 (+)
G80632 NA non-coding upstream 65157 10628554 ~ 10628959 (+)
G80630 NA non-coding upstream 118122 10575404 ~ 10575994 (+)
G80621 NA non-coding upstream 123903 10567207 ~ 10570213 (+)
G80562 NA non-coding upstream 246331 10446450 ~ 10447785 (+)
G80554 NA non-coding upstream 336563 10356232 ~ 10357553 (+)
G80700 NA non-coding downstream 216551 10911189 ~ 10911883 (+)
G80705 NA non-coding downstream 386708 11081346 ~ 11082289 (+)
G80706 LOC102201770 non-coding downstream 388758 11083396 ~ 11084687 (+)
G80719 NA non-coding downstream 399793 11094431 ~ 11139033 (+)
G80730 NA non-coding downstream 415899 11110537 ~ 11111834 (+)
G80638 NA other upstream 32146 10641132 ~ 10661970 (+)
G80551 LOC107659525,LOC107581741,LOC107718227,LOC107685975,LOC107573079,LOC103355429 other upstream 222929 10466622 ~ 10471187 (+)
pik3ca pik3ca,LOC107574159,LOC107685965 other upstream 1153995 9521798 ~ 9540121 (+)
chchd4a chchd4a,chchd4,LOC107574929,LOC107715767 other upstream 1268814 9422950 ~ 9425302 (+)
itpr1b itpr1,LOC107685975,LOC107659525 other upstream 1714875 8891450 ~ 8979241 (+)
G80761 NA other downstream 527709 11222347 ~ 11226622 (+)
LOC122354145 pfkl,pfklb,LOC107564579,LOC108444469 other downstream 811015 11505653 ~ 11507771 (+)
rpl37a rpl37a,RPL37A,zgc:171772,LOC107564751,LOC107567628 other downstream 830385 11525023 ~ 11527042 (+)
eif4a3 eif4a3,LOC107702040 other downstream 834081 11528719 ~ 11535114 (+)
LOC122354243 irf2bp2b,LOC107713243,LOC107564749,LOC107567632,LOC107683260,LOC107740065 other downstream 885388 11580026 ~ 11672957 (+)

Expression


Co-expression Network