G80808


Basic Information

Item Value
gene id G80808
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056709.1
NCBI id CM032078.1
chromosome length 24513629
location 11508000 ~ 11509053 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU119508
CAATGCAGGTTTCTTTACATGGAAACCCAGATAAATAAACATAGCTAATATTGtagttaataatttatattgatttttatttttttcctttttagtttaaattttagtatcttttcatctttaatgtctatatgtttatttaatatttttagtatatttaatttatgtaatatcCATTTTGTCGTGGCAGTCTTTGtactagttttatttttatttcttaaaaatgtaaaaatgttcctCAAATTCAGAGATTTTTTCTATAAGTCTAATTTCTGTACCTGGTAATATCAGATCATTTTagataagtttttatttttattgttgaatataattatcttttttctagttaagctctaaaatattaattcactGGAAATTGTGAACGGGTTCAAAAAGCCTTTAATAATCTTATAATATGAGTCTCTGCTGTTTTGAAGGGAGTTGATGTTTTCTACAGGAAACTCTTGAGATAACATCCTCCTCTTCTGTGTCTTCTGCTCGGTTTTACTGACAGCAGCAGGAAACAGGATTTAGATTACAGCAGCAGATTAAATCTGATTACAGCTgagaccctcacacacacacacacactctctgtctcacacacacacacacacacacacacacacacacacacacacacacacacacagagagacagagagagagagagacacacacacacacacacacacacacacactctctcacacacatttaaGCAGAGATTATACCAAGCAAAGCACAATTTAAgttcaaatatacatttagatttatactggacaaataaatgcatccttgctgagcagaagagacttattttaaaacagaa

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU119508 True 832 lncRNA 0.31 2 11508000 11509053

Neighbor

gene id symbol gene type direction distance location
orc2 orc2,LOC107702034,LOC107702742,LOC107564576,LOC107740071,LOC107564577 coding upstream 8078 11486516 ~ 11499922 (+)
ldb1b LOC107702035,LOC107564569,LOC107713246,LOC108444470,LOC107700700,LOC107567630 coding upstream 22518 11470319 ~ 11485482 (+)
cant1b cant1b,LOC107702024,LOC107700370,LOC107567625 coding upstream 73476 11424607 ~ 11434524 (+)
afmid afmid coding upstream 83786 11417605 ~ 11424214 (+)
syngr2b syngr2b,LOC107702021,LOC107713240,LOC107564563,LOC107700198 coding upstream 103451 11397046 ~ 11404549 (+)
LOC122354143 pfklb,pfkl,LOC108444469 coding downstream 3280 11512333 ~ 11523658 (+)
opn6a LOC107740064,LOC107567633,LOC107702020 coding downstream 30625 11539678 ~ 11547713 (+)
map1lc3c map1lc3c,LOC107701141,LOC107702025 coding downstream 88737 11597790 ~ 11599698 (+)
tbce LOC107715672,LOC107661157,LOC107713241,LOC107574186,LOC107701315,LOC107740075,LOC107564754 coding downstream 197055 11706108 ~ 11715351 (+)
si:ch1073-365p7.2 NA coding downstream 273606 11782659 ~ 11794097 (+)
G80804 NA non-coding upstream 35699 11471971 ~ 11472301 (+)
G80668 NA non-coding upstream 55862 11449049 ~ 11452138 (+)
LOC122353945 NA non-coding upstream 60479 11443640 ~ 11447521 (+)
G80667 LOC107567635 non-coding upstream 69274 11437907 ~ 11438726 (+)
G80784 NA non-coding upstream 180322 11326427 ~ 11327678 (+)
G80809 NA non-coding downstream 2421 11511474 ~ 11511894 (+)
G80814 NA non-coding downstream 40562 11549615 ~ 11555713 (+)
G80819 NA non-coding downstream 47909 11556962 ~ 11559047 (+)
G80825 NA non-coding downstream 62049 11571102 ~ 11571431 (+)
G80860 NA non-coding downstream 173871 11682924 ~ 11683244 (+)
LOC122354145 pfkl,pfklb,LOC107564579,LOC108444469 other upstream 229 11505653 ~ 11507771 (+)
G80761 NA other upstream 281378 11222347 ~ 11226622 (+)
G80638 NA other upstream 846030 10641132 ~ 10661970 (+)
G80551 LOC107659525,LOC107581741,LOC107718227,LOC107685975,LOC107573079,LOC103355429 other upstream 1036813 10466622 ~ 10471187 (+)
pik3ca pik3ca,LOC107574159,LOC107685965 other upstream 1967879 9521798 ~ 9540121 (+)
rpl37a rpl37a,RPL37A,zgc:171772,LOC107564751,LOC107567628 other downstream 15970 11525023 ~ 11527042 (+)
eif4a3 eif4a3,LOC107702040 other downstream 19666 11528719 ~ 11535114 (+)
LOC122354243 irf2bp2b,LOC107713243,LOC107564749,LOC107567632,LOC107683260,LOC107740065 other downstream 70973 11580026 ~ 11672957 (+)
tomm20b tomm20b,tomm20,LOC107740066,LOC107701232,LOC107661159,LOC107713233 other downstream 189271 11698324 ~ 11700214 (+)
LOC122353861 gpr137b,LOC107740081,LOC107558369,LOC107703026,LOC107713226,LOC105890320,LOC101884293 other downstream 243492 11752545 ~ 12870121 (+)

Expression


Co-expression Network