G80861


Basic Information

Item Value
gene id G80861
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056709.1
NCBI id CM032078.1
chromosome length 24513629
location 11683460 ~ 11683944 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU119595
TCGGAGTTGATCTCTCGCAATTCGGAGTTGATATCTCGCAATTCGGAGTTGACATCTCGCAATTCGGAGTTGATCTCTCGCAATTCGGAGTTGATCTCTCGCAATTCGGAGTTGATCTCTCGCAATTCGGAGTTGATCTCTCGCAATTCGGAGTTGATATCTCGCAATTCGGAGTTGATATCTCGCAATTCGGAGTTGATATCTCGCAATTCGGAGTTGATATCTCGCAATTCGGAGTTGACCTCTCGCAATTCGGAGTTGATCTCTCGCAATTCGGAGTTGTTGATTCTGAGTTGATCTCTCGCAATTCGGAGTTGATCTCTCGCAATTCGGAGTTGA

Function

GO:

id name namespace
GO:0016192 vesicle-mediated transport biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU119595 True 339 lncRNA 0.46 2 11683460 11683944

Neighbor

gene id symbol gene type direction distance location
map1lc3c map1lc3c,LOC107701141,LOC107702025 coding upstream 83762 11597790 ~ 11599698 (+)
opn6a LOC107740064,LOC107567633,LOC107702020 coding upstream 135747 11539678 ~ 11547713 (+)
LOC122354143 pfklb,pfkl,LOC108444469 coding upstream 159802 11512333 ~ 11523658 (+)
orc2 orc2,LOC107702034,LOC107702742,LOC107564576,LOC107740071,LOC107564577 coding upstream 183538 11486516 ~ 11499922 (+)
ldb1b LOC107702035,LOC107564569,LOC107713246,LOC108444470,LOC107700700,LOC107567630 coding upstream 197978 11470319 ~ 11485482 (+)
tbce LOC107715672,LOC107661157,LOC107713241,LOC107574186,LOC107701315,LOC107740075,LOC107564754 coding downstream 22164 11706108 ~ 11715351 (+)
si:ch1073-365p7.2 NA coding downstream 98715 11782659 ~ 11794097 (+)
mfn1b mfn1b,LOC107661155,LOC107701405,LOC107706807,LOC107552408,LOC108443893,LOC108270971 coding downstream 111591 11795535 ~ 11811706 (+)
clcn4 clcn4,LOC107552404,LOC107705120,LOC107558374,LOC108443897,LOC103025096 coding downstream 186481 11870425 ~ 11883430 (+)
LOC122353838 LOC108444238,LOC108271228 coding downstream 209404 11893348 ~ 11955071 (+)
G80860 NA non-coding upstream 216 11682924 ~ 11683244 (+)
G80825 NA non-coding upstream 112029 11571102 ~ 11571431 (+)
G80819 NA non-coding upstream 124413 11556962 ~ 11559047 (+)
G80814 NA non-coding upstream 127747 11549615 ~ 11555713 (+)
G80809 NA non-coding upstream 171566 11511474 ~ 11511894 (+)
G80865 NA non-coding downstream 6496 11690440 ~ 11694453 (+)
G80847 NA non-coding downstream 52428 11736372 ~ 11766054 (+)
LOC122353893 LOC107558369,LOC107703026,LOC101884293 non-coding downstream 77413 11761357 ~ 11764940 (+)
G80887 NA non-coding downstream 89674 11773618 ~ 11814731 (+)
G80889 NA non-coding downstream 90782 11774726 ~ 11775122 (+)
LOC122354243 irf2bp2b,LOC107713243,LOC107564749,LOC107567632,LOC107683260,LOC107740065 other upstream 10503 11580026 ~ 11672957 (+)
eif4a3 eif4a3,LOC107702040 other upstream 148346 11528719 ~ 11535114 (+)
rpl37a rpl37a,RPL37A,zgc:171772,LOC107564751,LOC107567628 other upstream 156418 11525023 ~ 11527042 (+)
LOC122354145 pfkl,pfklb,LOC107564579,LOC108444469 other upstream 175689 11505653 ~ 11507771 (+)
G80761 NA other upstream 456838 11222347 ~ 11226622 (+)
tomm20b tomm20b,tomm20,LOC107740066,LOC107701232,LOC107661159,LOC107713233 other downstream 14380 11698324 ~ 11700214 (+)
LOC122353861 gpr137b,LOC107740081,LOC107558369,LOC107703026,LOC107713226,LOC105890320,LOC101884293 other downstream 68601 11752545 ~ 12870121 (+)
shroom2b LOC107661152,LOC107552394,LOC107740069,LOC107705119,LOC107558375,LOC107702184 other downstream 143934 11827878 ~ 11857319 (+)
LOC122353892 LOC107565225,LOC107684241,LOC107713230,LOC107702019,LOC107564758,LOC107753360,LOC107576527 other downstream 176715 11860659 ~ 11868523 (+)
G81213 LOC107741992,LOC107680499,LOC107657964,LOC108442067,LOC108271057,LOC107574809 other downstream 508810 12192754 ~ 12225492 (+)

Expression


Co-expression Network