G80889


Basic Information

Item Value
gene id G80889
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056709.1
NCBI id CM032078.1
chromosome length 24513629
location 11774726 ~ 11775122 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU119635
tgtctgtgtgcatgcgtgtgtgtgtgtgtgtctgtgtgcgtgcatgtgtgtctgtgtgcgtgcatgtgtgtgtgtgtgcgtgcatgtgtgtgtgtgtgcatgcatgtgtgtgtgtgtgcatgtgtgtgtctcactTGAAGCAGTTCTCCTCGTAGATGCTGTTCCAGACTCTCCAGGCCGAGGGTCCTTTATATCCGGTGTATCTCTCGGGGTTCAGCAGCAGATCCACGTACTCCGCATCAGGAGACATTTCAT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU119635 True 255 lncRNA 0.53 2 11774726 11775122

Neighbor

gene id symbol gene type direction distance location
tbce LOC107715672,LOC107661157,LOC107713241,LOC107574186,LOC107701315,LOC107740075,LOC107564754 coding upstream 59375 11706108 ~ 11715351 (+)
map1lc3c map1lc3c,LOC107701141,LOC107702025 coding upstream 175028 11597790 ~ 11599698 (+)
opn6a LOC107740064,LOC107567633,LOC107702020 coding upstream 227013 11539678 ~ 11547713 (+)
LOC122354143 pfklb,pfkl,LOC108444469 coding upstream 251068 11512333 ~ 11523658 (+)
orc2 orc2,LOC107702034,LOC107702742,LOC107564576,LOC107740071,LOC107564577 coding upstream 274804 11486516 ~ 11499922 (+)
si:ch1073-365p7.2 NA coding downstream 7537 11782659 ~ 11794097 (+)
mfn1b mfn1b,LOC107661155,LOC107701405,LOC107706807,LOC107552408,LOC108443893,LOC108270971 coding downstream 20413 11795535 ~ 11811706 (+)
clcn4 clcn4,LOC107552404,LOC107705120,LOC107558374,LOC108443897,LOC103025096 coding downstream 95303 11870425 ~ 11883430 (+)
LOC122353838 LOC108444238,LOC108271228 coding downstream 118226 11893348 ~ 11955071 (+)
LOC122353874 ralbb,ralba,LOC107558370,LOC107657963,LOC107713003,LOC107552396,LOC107741991,LOC107597482,LOC107746258 coding downstream 386956 12162078 ~ 12166342 (+)
G80847 NA non-coding upstream 8672 11736372 ~ 11766054 (+)
LOC122353893 LOC107558369,LOC107703026,LOC101884293 non-coding upstream 9786 11761357 ~ 11764940 (+)
G80865 NA non-coding upstream 80273 11690440 ~ 11694453 (+)
G80861 NA non-coding upstream 90782 11683460 ~ 11683944 (+)
G80860 NA non-coding upstream 91482 11682924 ~ 11683244 (+)
G81234 NA non-coding downstream 460070 12235192 ~ 12236177 (+)
G81236 NA non-coding downstream 462696 12237818 ~ 12238356 (+)
G81238 NA non-coding downstream 463348 12238470 ~ 12239245 (+)
G81240 NA non-coding downstream 464409 12239531 ~ 12239751 (+)
G81241 NA non-coding downstream 465011 12240133 ~ 12240391 (+)
tomm20b tomm20b,tomm20,LOC107740066,LOC107701232,LOC107661159,LOC107713233 other upstream 74512 11698324 ~ 11700214 (+)
LOC122354243 irf2bp2b,LOC107713243,LOC107564749,LOC107567632,LOC107683260,LOC107740065 other upstream 101769 11580026 ~ 11672957 (+)
eif4a3 eif4a3,LOC107702040 other upstream 239612 11528719 ~ 11535114 (+)
rpl37a rpl37a,RPL37A,zgc:171772,LOC107564751,LOC107567628 other upstream 247684 11525023 ~ 11527042 (+)
LOC122354145 pfkl,pfklb,LOC107564579,LOC108444469 other upstream 266955 11505653 ~ 11507771 (+)
shroom2b LOC107661152,LOC107552394,LOC107740069,LOC107705119,LOC107558375,LOC107702184 other downstream 52756 11827878 ~ 11857319 (+)
LOC122353892 LOC107565225,LOC107684241,LOC107713230,LOC107702019,LOC107564758,LOC107753360,LOC107576527 other downstream 85537 11860659 ~ 11868523 (+)
G81213 LOC107741992,LOC107680499,LOC107657964,LOC108442067,LOC108271057,LOC107574809 other downstream 417632 12192754 ~ 12225492 (+)
LOC122353844 LOC107747562,LOC107680562,LOC107597180,LOC107712997,LOC107657970,LOC107557419 other downstream 756204 12531326 ~ 12535426 (+)
G81268 NA other downstream 807793 12582915 ~ 12585641 (+)

Expression


Co-expression Network