CI01000000_15158265_15165627


Basic Information

Item Value
gene id CI01000000_15158265_15165627
gene name NA
gene type misc
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000000
NCBI id null
chromosome length 19091038
location 15157022 ~ 15166585 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000000_15158265_15165627.mRNA
CTATAAAACACAAAAGGAGAATTTTTGGACAAAATATATTTGAGTTTATATACATGTAATGTATATGTACAGTTTAGTATTATTAAAAGATAATAACACTATTACTAATTCTACTACTAATAATACTGTACAACTCACTAAGGAATGATGAGCTGCTGGGTTCATGAATATTAATCAAGCTATCAGTGTTCACTGGAACTGATTTGCTGAAATCAAAACAGAGACAGTAATAGATGAGCGCCAGCCAATGAGATTGCCGTTTACACATTAGTTCCACCCACTACCGGAGAAACCGACATCTCTTTTGTATGCTCTTAATTGCTAATAATTCCAAATGAGCTCCGTTATTTTGAAAGGAAAATACAACAAAGAATATTGTTACATGTAGCGCGTTGATTCTGCCTGGTAAGTAAGACTCTCGCTCTCTCTCTCAGAAACAGCGCTCTCAGCAAAGCGACGGTGAATCGCGCGCCTTCACACTAGAGTTTGCGGTACGTCAAATACAGGTACACTGCGCATCCATTGAGCTGAACTGAAATAGTACAGATCACAAAACTCTCAAGCGCTCAGTCAGCGTTGAGGGAGTGAAAATATATCTATGCTAAACTTATACTACTTAGCCTCTAAAACGCACACTGGCGAGTAAAATCTAAGAATTTATTAGCCAATGGCTGGTGATAGACATTATTTAGTCGCCCAGAATGAAGATTTACTCTCTTTGTAGAGGTTTGCAATGAAAGTGAATGGTGACCAGGAGCTGCCAAACTCTAAAAAGGACCAAAAAAGCACCATAAACACATCATTAAAGTCGTCCAAATTAATCATTCACTATATTTCAAGTCTTCTAAAGTCATATAACTTTGTGTGAGGAATAGACAAACATTTAAGTCGTAAATCACAAAAGGACTTGCTATAGTCACCATTCACTGTCATAGTGTGGAAAAGAGCAGCTTGGACGGTTTTAAATTGCTCTTTTTGTGTTCTACGAAACAAACTGATGGTGAGTAAATGATGATTTTGTTTTTTAGTAAACTATCCCTTATTGCAACATTAGTCCATGCATTTTGTCATTTTTGGTAAAAAGGCTCACTAAACACAAAGCAAGGTTTGATTTAAGACTTTAGTTAAACACACAGATGTTTGTAATGTCAGTATAACATAGTCCAGAGGATGCATTGGATAAACAAGACCACGATTTCTAAAGTTTTTTCATACACTCATTTCTTTCTATATACAGCCCATGATGTGGGTGGACAACACTAACAACATTGGCTATAAACATCCTAACGAATGTCGACATGTGGCGTCACTGCGTTACGTAGCTCACAACAGATTGTGCCACTCCACCCTCAACCCAGTTTCCTCTGTGAAAACCACAGCAAAACTGAGTCTTGGGGAGAGAAAAAACATTTTTGCATCAGCCGTTACTCTCGCAGTCATTGGCTGCTATAGCAACACGAGTCACAAAAATCGGCAAAGATTACTGGCTGCTCAAGATGTCATACCACCACTCCCCACACCCACATTACCACAACCAAAATTTCACACCAAGCTCTCCTCTCCAATTCAGACACTAATTCAGAGGATAACAGGAGATTACTGTTATACAACTCACAACAATATCACTTTTTATATTGAAACAGATGAAATAAAAGTGAAAGCCTTCTGCCTTTATCTCCTGGCCTATTTCCTGTGGGCTGATCCCTGCATCCTGAAAGTCTGTGCTGCCCCACCCTCTCCATCCGGACTGCCGCTCCTTAACCCTTCAGCACTGCAGAGAGCAGACAATCTCACTGGCATTGGACCTGCCTCAAAGATATCAATCTTTATCTTTTCCTGATAAATACGATATGTGATATGAGTCACTATGTGATTCCAGCTCAAAGATTTATCCTTATAGATAGGTTACTGTTGTTGTTGTTGTTGTTGTTGTTGTTATTGTTGACTTGCATACAAATGGAGCTGCATGATTCTGGTTAAATTGAGAATCACTTTTTTTTTTTTTTTTTCAAACAGAGATCACATTTCTTCCACAATACTGAACAGATAACTAAACAAAATAGTGCAATTTACTAGAGGTTCTTACTAAATGTTAATTGCTGCAGTCTATTTAAAATAGACGCCAAGTTACTTTTAAAAGGCGATTTGCTCTATTTTGATCGCTGCCGTAGACATCAGTGTTTATATCCAAACTATAAACTTTTATCCCAGTACTTCTGTGATAATATGAATATTTGTAACAGATTTGAATGTTTCTGTGTGATTTAGTCAAAGGTTTAATAGACACAGGTGAATCGTTGTCATTTGGGAATGAGATTGCATGGGTGTTCGATTAATCGTGCAGCTCAACATACAAAGGAGCTATTTGCATTCTGTGCAAATGGCCCCTTATGATGATTTTTGAAAGGATTTTTGAAGTTTCACATTTATAAGGAAAAGAACAGAGTGAGCATCCTGTACAGCATCTCCTTTTGTGTTCAATAGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000000_15158265_15165627.mRNA False 2485 mRNA 0.38 4 15157022 15166272

Neighbor

gene id symbol gene type direction distance location
CI01000000_15120586_15123050 TSC22D3, TSC22D3.L coding upstream 33374 15120384 ~ 15123648 (+)
CI01000000_15091223_15092317 NA coding upstream 64451 15091009 ~ 15092571 (+)
CI01000000_14882756_14886030 NEK12 coding upstream 270890 14882756 ~ 14886132 (+)
CI01000000_14857956_14858702 NXT2 coding upstream 298239 14857956 ~ 14858783 (+)
CI01000000_14837947_14838141 NA coding upstream 318700 14837902 ~ 14838322 (+)
CI01000000_15519933_15528742 PCDH11X, PCDH11 coding downstream 353661 15519933 ~ 15528895 (+)
CI01000000_15620007_15622711 PCDH11X coding downstream 453735 15620007 ~ 15622842 (+)
CI01000000_15684820_15696865 NA coding downstream 518223 15684495 ~ 15697115 (+)
CI01000000_15893372_15894283 NEUROG1 coding downstream 725407 15891679 ~ 15894893 (+)
CI01000000_15964514_15964804 NA coding downstream 798055 15964327 ~ 15964961 (+)
G9466 NA non-coding upstream 187626 14966399 ~ 14969396 (+)
G9404 NA non-coding upstream 307642 14849134 ~ 14849380 (+)
G9390 NA non-coding upstream 315330 14775956 ~ 14841692 (+)
G10004 NA non-coding downstream 198796 15365068 ~ 15365385 (+)
G10009 NA non-coding downstream 221322 15387594 ~ 15387826 (+)
G10010 NA non-coding downstream 223461 15389733 ~ 15389999 (+)
G10011 NA non-coding downstream 223746 15390018 ~ 15390529 (+)
G10026 NA non-coding downstream 250201 15416473 ~ 15418308 (+)
G9201 NA other upstream 922081 14215024 ~ 14234941 (+)
G7522 NA other upstream 2978014 12178369 ~ 12179008 (+)
G7514 NA other upstream 3020014 12136522 ~ 12137008 (+)
G7153 NA other upstream 3911389 11244457 ~ 11245633 (+)
G7018 NA other upstream 4176150 10978489 ~ 10980872 (+)
G10201 NA other downstream 763994 15930266 ~ 15930562 (+)
CI01000000_17339270_17345013 CXCL14, CXL14 other downstream 2172882 17339154 ~ 17346200 (+)
G11465 NA other downstream 2717681 17883953 ~ 17887462 (+)
G11521 NA other downstream 2866467 18032739 ~ 18164112 (+)
G11801 NA other downstream 3514595 18674116 ~ 18745376 (+)
G9406 NA non-coding upstream 319028 14828091 ~ 14840289 (+)
G9395 NA non-coding upstream 338795 14819003 ~ 14820522 (+)

Expression


Co-expression Network