G81234


Basic Information

Item Value
gene id G81234
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056709.1
NCBI id CM032078.1
chromosome length 24513629
location 12235192 ~ 12236177 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU120167
ccgtcagaatgagcgcTGATACAAACAGTCTTCTCCAGACGGGAAGTGACGGACTGGATTGTTGTTTTATCggctcttattctgacggcacccattcactacagtaGAAGCTATTCTTCTCCGAATCTGACGACGATACACGAGACTCGCCTCGAACTGATGGGAATCCCAGTCTGAGAGGTTTCTAATGGAGCCGATCATGTTTTAGAGTGGCATATTGTCAATATAAAACAGAAACCCATTTGTTTTCTTACAGAAAACTGACCTTTAATGGATTAAATGCATGCGTGTCGACAACATGTACAGATCTGATGTACAAACCAGTTTTGTTTCGCAGTGTATTACAGACTTTAGTCGGGTGAAGAGAGACGTATAAATGAGTGTTAATCGTTTCAATCTAATAACCATCACTGCTGGCGTTTCATGAACTAGTCTGTTTTTGAGCATCCGGACTAATTTCTGTAATAAttgttattcttattataacagcatttcatgttttcatacctgctgctgctgcacacTATTGCTCTAGatcgttttctttttatttatcgGCCTAAAACGACACGCCGCAGTGGTTTTCGTGA
>TU120168
CGAGAATCCGTTCGATCGAGAAACTGCCAACTCGGATCGCAGTTTAGAAACCGGATCCCGTAGTTTAGCGCGCCTGCTTCTGTACGAAATGTTTTGGGAGAAATCTGCCGTCGGACAATGCGTCTTAGGTACGAACGGCTGACtgggtttgtttatttattttctagttCGGCGTGGCGAGATCGAAGTGCTGATATTAAGAGAAACGCACTGGCGATCGATTGAAATAACGCCACCgaataacaattaaaaacctagcataaaagaaaatgaagaattaTCATGCTTAACTTGAGGGTTTTGTTGCAACCCGTCTGCATTATGTTTAAATCGAAGTCCTCgttcaagatgtagatgagttttttcttctttagatttggagaaagcgaatgggtgccgtcagaatgagcgcTGATACAAACAGTCTTCTCCAGACGGGAAGTGACGGACTGGATTGTTGTTTTATCggctcttattctgacggcacccattcactacagtaGAAGCTATTCTTCTCCGAATCTGACGACGATACACGAGACTCGCCTCGAACTGATGGGAATCCCAGTCTGAGAGGTTTCTAATGGAGCCGATCATGTTTTAGAGTGGCATATTGTCAATATAAAACAGAAACCCATTTGTTTTCTTACAGAAAACTGACCTTTAATGGATTAAATGCATGCGTGTCGACAACATGTACAGATCTGATGTACAAACCAGTTTTGTTTCGCAGTGTATTACAGACTTTAGTCGGGTGAAGAGAGACGTATAAATGAGTGTTAATCGTTTCAATCTAATAACCATCACTGCTGGCGTTTCATGAACTAGTCTGTTTTTGAGCATCCGGACTAATTTCTGTAATAAttgttattcttattataacagcatttcatgttttcatacctgctgctgctgcacacTATTGCTCTAGatcgttttctttttatttatcgGCCTAAAACGACACGCCGCAGTGGTTTTCGTGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU120167 False 590 lncRNA 0.41 1 12235588 12236177
TU120168 True 986 lncRNA 0.42 1 12235192 12236177

Neighbor

gene id symbol gene type direction distance location
LOC122353874 ralbb,ralba,LOC107558370,LOC107657963,LOC107713003,LOC107552396,LOC107741991,LOC107597482,LOC107746258 coding upstream 68850 12162078 ~ 12166342 (+)
LOC122353838 LOC108444238,LOC108271228 coding upstream 280121 11893348 ~ 11955071 (+)
clcn4 clcn4,LOC107552404,LOC107705120,LOC107558374,LOC108443897,LOC103025096 coding upstream 351762 11870425 ~ 11883430 (+)
mfn1b mfn1b,LOC107661155,LOC107701405,LOC107706807,LOC107552408,LOC108443893,LOC108270971 coding upstream 423486 11795535 ~ 11811706 (+)
si:ch1073-365p7.2 NA coding upstream 441095 11782659 ~ 11794097 (+)
acyp2 acyp2,LOC107712999,LOC107744585 coding downstream 111478 12347655 ~ 12364409 (+)
sptbn1 sptbn1,LOC108442064,LOC108270927 coding downstream 138936 12375113 ~ 12466443 (+)
eml6 eml6,LOC107597181,LOC107680471 coding downstream 236542 12472719 ~ 12523419 (+)
LOC122353873 NA coding downstream 364906 12601083 ~ 12602840 (+)
si:ch73-106k19.2 si:ch73-106k19.2,LOC107712967,LOC107557404,LOC107680468 coding downstream 373735 12609912 ~ 12612530 (+)
G80887 NA non-coding upstream 420461 11773618 ~ 11814731 (+)
G80889 NA non-coding upstream 460070 11774726 ~ 11775122 (+)
G80847 NA non-coding upstream 469138 11736372 ~ 11766054 (+)
LOC122353893 LOC107558369,LOC107703026,LOC101884293 non-coding upstream 470252 11761357 ~ 11764940 (+)
G80865 NA non-coding upstream 540739 11690440 ~ 11694453 (+)
G81236 NA non-coding downstream 1641 12237818 ~ 12238356 (+)
G81238 NA non-coding downstream 2293 12238470 ~ 12239245 (+)
G81240 NA non-coding downstream 3354 12239531 ~ 12239751 (+)
G81241 NA non-coding downstream 3956 12240133 ~ 12240391 (+)
LOC122353894 LOC107657969 non-coding downstream 129482 12365659 ~ 12372611 (+)
G81213 LOC107741992,LOC107680499,LOC107657964,LOC108442067,LOC108271057,LOC107574809 other upstream 9700 12192754 ~ 12225492 (+)
LOC122353892 LOC107565225,LOC107684241,LOC107713230,LOC107702019,LOC107564758,LOC107753360,LOC107576527 other upstream 366669 11860659 ~ 11868523 (+)
shroom2b LOC107661152,LOC107552394,LOC107740069,LOC107705119,LOC107558375,LOC107702184 other upstream 377873 11827878 ~ 11857319 (+)
tomm20b tomm20b,tomm20,LOC107740066,LOC107701232,LOC107661159,LOC107713233 other upstream 534978 11698324 ~ 11700214 (+)
LOC122354243 irf2bp2b,LOC107713243,LOC107564749,LOC107567632,LOC107683260,LOC107740065 other upstream 562235 11580026 ~ 11672957 (+)
LOC122353844 LOC107747562,LOC107680562,LOC107597180,LOC107712997,LOC107657970,LOC107557419 other downstream 295149 12531326 ~ 12535426 (+)
G81268 NA other downstream 346738 12582915 ~ 12585641 (+)
G81364 rps23,rs23,LOC107680479,LOC106566095,LOC107578001 other downstream 433612 12669789 ~ 12700884 (+)
slmapa slmapa,slmap,LOC107680512,LOC107657974,LOC107557391 other downstream 532030 12768207 ~ 13057220 (+)
G81416 rala,LOC107694485,LOC107741991,LOC107552396,LOC107713003,LOC107657963,LOC105901921 other downstream 639336 12875513 ~ 12879313 (+)

Expression


Co-expression Network