G81238


Basic Information

Item Value
gene id G81238
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056709.1
NCBI id CM032078.1
chromosome length 24513629
location 12238470 ~ 12239245 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU120172
GGGGTTGGGAGTCCTCCGCCTTAAACAGGCTTGTGGCGGAACCGAAGGAAAAGGGTTTGGGGTCCTCCGCCTTAAACAGGCTTGTGGCGGAACCGAAGGAAAAGGGTTTGGGGTCCTCCGCCTTAAACAGGCTTGTGGCGGAACCGAAGGGAAGGGTTTGGGGTCCTCCGCCTTAAACAGGCTTGTGGCGGAACCGAAGGGAAAGGGTTTGGGGTC
>TU120174
GGGGTTGGGAGTCCTCCGCCTTAAACAGGCTTGTGGCGGAACCGAAGGAAAAGGGTTTGGGGTCCTCCGCCTTAAACAGGCTTGTGGCGGAACCGAAGGGAAGGGGTTTGGGGTCCTCCGTCTTAAACAGGCTTGTGGCGGAACCGAAGAGAAGGGTTGGGGTCCTCCGCCTTAAACAGGCTTGTGGCGGAACCGAAGGGAAGGGGTTGGGGTCCTCCGCCTTAAACAGGCTTGTGGCGGAACCGAAGGGAAGGGTTTAGGGTCCTCCGCCTTAAACAGGCTTGTGGCGGAACCGAAGGGAAGGGGTTTAGGGTCCTCCGCCTTAAACAGGCTTGTGGCGGAACCGAGAGGGAAGGGGTTGGGGGTCCT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU120172 False 216 lncRNA 0.59 2 12238470 12238784
TU120174 True 369 lncRNA 0.60 2 12238470 12239245

Neighbor

gene id symbol gene type direction distance location
LOC122353874 ralbb,ralba,LOC107558370,LOC107657963,LOC107713003,LOC107552396,LOC107741991,LOC107597482,LOC107746258 coding upstream 72128 12162078 ~ 12166342 (+)
LOC122353838 LOC108444238,LOC108271228 coding upstream 283399 11893348 ~ 11955071 (+)
clcn4 clcn4,LOC107552404,LOC107705120,LOC107558374,LOC108443897,LOC103025096 coding upstream 355040 11870425 ~ 11883430 (+)
mfn1b mfn1b,LOC107661155,LOC107701405,LOC107706807,LOC107552408,LOC108443893,LOC108270971 coding upstream 426764 11795535 ~ 11811706 (+)
si:ch1073-365p7.2 NA coding upstream 444373 11782659 ~ 11794097 (+)
acyp2 acyp2,LOC107712999,LOC107744585 coding downstream 108410 12347655 ~ 12364409 (+)
sptbn1 sptbn1,LOC108442064,LOC108270927 coding downstream 135868 12375113 ~ 12466443 (+)
eml6 eml6,LOC107597181,LOC107680471 coding downstream 233474 12472719 ~ 12523419 (+)
LOC122353873 NA coding downstream 361838 12601083 ~ 12602840 (+)
si:ch73-106k19.2 si:ch73-106k19.2,LOC107712967,LOC107557404,LOC107680468 coding downstream 370667 12609912 ~ 12612530 (+)
G81236 NA non-coding upstream 114 12237818 ~ 12238356 (+)
G81234 NA non-coding upstream 2293 12235192 ~ 12236177 (+)
G80887 NA non-coding upstream 423739 11773618 ~ 11814731 (+)
G80889 NA non-coding upstream 463348 11774726 ~ 11775122 (+)
G80847 NA non-coding upstream 472416 11736372 ~ 11766054 (+)
G81240 NA non-coding downstream 286 12239531 ~ 12239751 (+)
G81241 NA non-coding downstream 888 12240133 ~ 12240391 (+)
LOC122353894 LOC107657969 non-coding downstream 126414 12365659 ~ 12372611 (+)
G81255 NA non-coding downstream 284608 12523853 ~ 12524317 (+)
G81261 NA non-coding downstream 332078 12571323 ~ 12571790 (+)
G81213 LOC107741992,LOC107680499,LOC107657964,LOC108442067,LOC108271057,LOC107574809 other upstream 12978 12192754 ~ 12225492 (+)
LOC122353892 LOC107565225,LOC107684241,LOC107713230,LOC107702019,LOC107564758,LOC107753360,LOC107576527 other upstream 369947 11860659 ~ 11868523 (+)
shroom2b LOC107661152,LOC107552394,LOC107740069,LOC107705119,LOC107558375,LOC107702184 other upstream 381151 11827878 ~ 11857319 (+)
tomm20b tomm20b,tomm20,LOC107740066,LOC107701232,LOC107661159,LOC107713233 other upstream 538256 11698324 ~ 11700214 (+)
LOC122354243 irf2bp2b,LOC107713243,LOC107564749,LOC107567632,LOC107683260,LOC107740065 other upstream 565513 11580026 ~ 11672957 (+)
LOC122353844 LOC107747562,LOC107680562,LOC107597180,LOC107712997,LOC107657970,LOC107557419 other downstream 292081 12531326 ~ 12535426 (+)
G81268 NA other downstream 343670 12582915 ~ 12585641 (+)
G81364 rps23,rs23,LOC107680479,LOC106566095,LOC107578001 other downstream 430544 12669789 ~ 12700884 (+)
slmapa slmapa,slmap,LOC107680512,LOC107657974,LOC107557391 other downstream 528962 12768207 ~ 13057220 (+)
G81416 rala,LOC107694485,LOC107741991,LOC107552396,LOC107713003,LOC107657963,LOC105901921 other downstream 636268 12875513 ~ 12879313 (+)

Expression


Co-expression Network