CI01000000_15684820_15696865


Basic Information

Item Value
gene id CI01000000_15684820_15696865
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000000
NCBI id null
chromosome length 19091038
location 15684495 ~ 15697115 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000000_15684820_15696865.mRNA
GTATAAAATATGCTGTATGGCTCCACGGAGCCCGGCATTTCCTTAACATATTGCAGTTGCTGGAGTGTTGCATGCCCCTGGCCTCCAGTTGTAATTTATTTTTGCGATGCATGTCACACTTTACATCCCACTGTACATTTGTACATTTGGGACTTCATGAATATATAATAGCAAAGAGCAGCATGAAATCATACGGATCTCCTCTGCAAAAGTAAAAGTGTAAATCACTCATAAGCAGCGATGAAATACGAGAGTGGTGCTGGAGTGGAGATGGTGATGAAATGCATCTAGCCTGGAGTAAGTGGCCTTTCCCTGATTCATGAGAATGAAAAGTGGGCCTCTTATTTCACCTGATGGTTGTGTCCAACCCTTGAGTGAAAAATGGCATCTTTCCCCTTGTAAAACACCCATGGGGTTAAATAGCTCCATTATTATTAATGACCATCCATTTGCCAATCTAGATGTGGAGTCAGAGTGGCTCAACGGGAGAGTAGTGATTCCCCCTGAATACAAAAAGCACTTAAACAGCATCAGAGTGAGCCGCTGCCTCCGGCTGACGAAAGCATTCAGCGCTGTCACCCACATCAGTCAAGCAGTACTAGTCCCTATGGAGGAGAAACTGATACGGACTACATCTTTGGAGCTGTTTAATGTGAAATATCACATGCGAAAAATAGTAGCTCTCCTGGCTGTTGACATAGCGCCACTGACAGCTCGTGCTGTGCCTCTGCACGCAGGAAAGCAGCGTGGCTTCAAAACACCTTTTACACATAATACCTGCTGGGCAAATGCACTAAAGGTGTCTACGGAATATACAAATATGTTAGGGCCGCTACATGTGTCTGCCTGCGCGCATGAATCTGTCCACCGTGGCGTGATGCGCTCGGCCCTCAAAAGAACAATGGCTCTGAAAGACACCTCCAATTTCCAAAGCAGCTCTGGGGTGATTTACAGCAGCCTCCGAGAGCGACCTGGCCAGGACTCATTCTGCTTGCTCAGAGATGGGAGACATCAGCATAAGAAAGCTATTGAAGTGAACCTGCAGAAGGCTCTCGCCGAAGCCTCGGAGACCTGTACCCAGGAATGTCTGATCCTGGGTCATTCTGACAGCTGCTGGATGCCGCCAGCGCTGACCCAATTCCAGACGTCCGGCGCCGCCACTCTGTCCTCCTTTGGTTTTCAACAAAGCTGGGCGCGGGGGACCAAGCCAGATGGGCGTCACACCCTTGGCAGCCAGCTTTTCCGCCACGTCCAGCCCCCAGACATCCGCGAGCGGAAGCGCCTTCCTGCACGAGCATCAGCTGTAGAAGCGAGGAACACTTTAATCCTATCTTTCTCTTATGGACTGAAAAGCCTTGATGTACTGCAGGTGGTGGTGGAGAATACTAACAAAAAAAGAAAGAAAGAAATGTGCTCCTTCGGTTATGGACCAGCTTCCATTAGGGAAAGCGAGCAATATGCATACGAAACTGTCTATTTGCAGAAAAGGAAGGCAGAGGGAACTCTTGATTAAGTCTGTCTGCACAGACAATAGCAGTTATACAGCTGTTAGAGGCATTGATTCAGTAGGAGGTGGGCTTCGGAAACACACCTGAGAGATTTTAGTTAGAAAGAGAAGAGGCCACCTAGGTGGACTCAAGAGTAATTGGTGAGTCTGGGCATATAACCACCATTATGTGCTCTGCAAATGTGCCAGTACTGCAGCTTTGGACCGAGCCCAAGACAGAGGTGGGAGCAAGAAAAGAGCTTTAAAAAGCAAATGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000000_15684820_15696865.mRNA True 1763 mRNA 0.48 7 15684495 15697115

Neighbor

gene id symbol gene type direction distance location
CI01000000_15620007_15622711 PCDH11X coding upstream 61653 15620007 ~ 15622842 (+)
CI01000000_15519933_15528742 PCDH11X, PCDH11 coding upstream 155600 15519933 ~ 15528895 (+)
CI01000000_15158265_15165627 NA coding upstream 518223 15157022 ~ 15166585 (+)
CI01000000_15120586_15123050 TSC22D3, TSC22D3.L coding upstream 560847 15120384 ~ 15123648 (+)
CI01000000_15091223_15092317 NA coding upstream 591924 15091009 ~ 15092571 (+)
CI01000000_15893372_15894283 NEUROG1 coding downstream 194564 15891679 ~ 15894893 (+)
CI01000000_15964514_15964804 NA coding downstream 267212 15964327 ~ 15964961 (+)
CI01000000_16011590_16014992 NA coding downstream 314475 16011590 ~ 16015151 (+)
CI01000000_16034357_16056363 SMAD5 coding downstream 336783 16033898 ~ 16056594 (+)
CI01000000_16066787_16081915 LMAN2 coding downstream 369194 16066309 ~ 16082483 (+)
G10062 NA non-coding upstream 211287 15472925 ~ 15473208 (+)
G10042 NA non-coding upstream 242801 15441340 ~ 15441694 (+)
G10026 NA non-coding upstream 266187 15416473 ~ 15418308 (+)
G10011 NA non-coding upstream 293966 15390018 ~ 15390529 (+)
G10010 NA non-coding upstream 294496 15389733 ~ 15389999 (+)
G10102 NA non-coding downstream 19502 15716617 ~ 15717028 (+)
G10117 NA non-coding downstream 47273 15744388 ~ 15744665 (+)
G10149 NA non-coding downstream 79459 15776574 ~ 15776917 (+)
G10153 NA non-coding downstream 82798 15779913 ~ 15780135 (+)
G10080 NA non-coding downstream 86123 15783238 ~ 15783518 (+)
G9201 NA other upstream 1449554 14215024 ~ 14234941 (+)
G7522 NA other upstream 3505487 12178369 ~ 12179008 (+)
G7514 NA other upstream 3547487 12136522 ~ 12137008 (+)
G7153 NA other upstream 4438862 11244457 ~ 11245633 (+)
G7018 NA other upstream 4703623 10978489 ~ 10980872 (+)
G10201 NA other downstream 233151 15930266 ~ 15930562 (+)
CI01000000_17339270_17345013 CXCL14, CXL14 other downstream 1642039 17339154 ~ 17346200 (+)
G11465 NA other downstream 2186838 17883953 ~ 17887462 (+)
G11521 NA other downstream 2335624 18032739 ~ 18164112 (+)
G11801 NA other downstream 2983752 18674116 ~ 18745376 (+)

Expression


Co-expression Network