G81416 (rala,LOC107694485,LOC107741991,LOC107552396,LOC107713003,LOC107657963,LOC105901921)


Basic Information

Item Value
gene id G81416
gene name rala,LOC107694485,LOC107741991,LOC107552396,LOC107713003,LOC107657963,LOC105901921
gene type unknown
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056709.1
NCBI id CM032078.1
chromosome length 24513629
location 12875513 ~ 12879313 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU120439
CGGGGCGGTGTGTTGGAGTAGTGGATTTGATCCCGGTTGACAGAATTATGTTTTAACCGTTTATACGCGCGAATAGAGTCGGAGGCTGCTCACGGATCTAACTCGAGTCtagttcttcttcttcttcttcttcttcttcttcttctggaaCACTAAAGTCATGGCAGCCAGTAAGAGCAAAAGCCAGAGTTCTCTGGTCCTTCACAAGGTGATCATGGTGGGCAGCGGCGGCGTGGGAAAATCAGCTCTCACACTGCAGTTCATGTATGACGAGTTTGTGGAGGACTACGAACCCACCAAAGCCGACAGTTACCGGAAGAAGGTGGTGCTGGATGGAGAGGAGGTGCAGATTGATATTTTGGATACGGCGGGGCAGGAAGACTACGCCGCCATCAGGGACAACTACTTCCGCAGCGGAGAGGGTTTCC
>TU120440
CGGGGCGGTGTGTTGGAGTAGTGGATTTGATCCCGGTTGACAGAATTATGTTTTAACCGTTTATACGCGCGAATAGAGTCGGAGGCTGCTCACGGATCTAACTCGAGGTAAGCGATCCACACGAGTCCGCGTTGTTTTGATCGGTTTGAAGTAGTTTAATCGCTTCCAGCGGACAACTGCTTTGCAGTTTTTGAGGTATTTCCTCGGATGAAGCGCCCCAATGCCTTTGTGGGAAAACTATGCGATTGACCGTTAGGGCGTCCAATGAGCGCGCGGGTTAGAGGAGGTCCCGCCTCATAATTTGTCTGCTCAACCAATCAAGAGCCAGGGGAGGCGGGCTCTCGTTTATAACAACGAGGAAGGGGTGGCGTCTCCGCGGgatgaaaaagtgaaaatcgcttcttttttttttttccaaaaacaaccCGTTTGAAAGGTTTTGGTGATATGTTGCTGTTTTGTTGCTCTTTGTTCACGGATAAGTAGCGTTCGCCGTTGTAGTTTCCGTTTACAAAGTAAAACTCAGTGACTGTACCATGGTACTTTTACTACGTACCATAATAGTCAATCATTACTATATTCATGTACAGTAGCACGATAAAAAAGCGTGCTAGTTCAGCACTATAAACTACAATCATGCATGAGTTACTGTATGTGAATTGTATGCGCCATCAAgcaatgattttatatttatatgtttcttTGAACGTGCTCATGTTTGCAGTCtagttcttcttcttcttcttcttcttcttcttcttctggaaCACTAAAGTCATGGCAGCCAGTAAGAGCAAAAGCCAGAGTTCTCTGGTCCTTCACAAGGTGATCATGGTGGGCAGCGGCGGCGTGGGAAAATCAGCTCTCACACTGCAGTTCATGTATGACGAGTTTGTGGAGGACTACGAACCCACCAAAGCCGACAGTTACCGGAAGAAGGTGGTGCTGGATGGAGAGGAGGTGCAGATTGATATTTTGGATACGGCGGGGCAGGAAGACTACGCCGCCATCAGGGACAACTACTTCCGCAGCGGAGAGGGTTTCC
>TU120442
CGGGGCGGTGTGTTGGAGTAGTGGATTTGATCCCGGTTGACAGAATTATGTTTTAACCGTTTATACGCGCGAATAGAGTCGGAGGCTGCTCACGGATCTAACTCGAGTCATGGCAGCCAGTAAGAGCAAAAGCCAGAGTTCTCTGGTCCTTCACAAGGTGATCATGGTGGGCAGCGGCGGCGTGGGAAAATCAGCTCTCACACTGCAGTTCATGTATGACGAGTTTGTGGAGGACTACGAACCCACCAAAGCCGACAGTTACCGGAAGAAGGTGGTGCTGGATGGAGAGGAGGTGCAGATTGATATTTTGGATACGGCGGGGCAGGAAGACTACGCCGCCATCAGGGACAACTACTTCCGCAGCGGAGAGGGTTTCCTTCTGGTGTTCTCCATCACGGAGCCAGTCCTTCAGCGCCTCATCAGAGTTCAGGTTCTCAGAATGATGTTATCATTACAGCGGCGTCCTGCGCTCAGACCTAGTTTCCAGCGTCAGCTTCTTGATCTTCAGATAAATGCGGCGGGTCTCGCTTTTACCTCGGCTCGAGACGAAACAAGCTTTGAAACGCGTTCAAATCGACAAAAGCTGAATTTC

Function

symbol description
rala Enables several functions, including Edg-2 lysophosphatidic acid receptor binding activity; enzyme binding activity; and guanyl ribonucleotide binding activity. Involved in several processes, including actin cytoskeleton reorganization; membrane raft localization; and positive regulation of cellular component organization. Located in several cellular components, including cell surface; cleavage furrow; and focal adhesion. Colocalizes with endocytic vesicle. Biomarker of pancreatic ductal adenocarcinoma.

NR:

description
PREDICTED: ras-related protein ralB-A-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU120439 False 428 TUCP 0.51 3 12875513 12879098
TU120440 True 1045 TUCP 0.47 2 12875513 12879098
TU120442 False 592 TUCP 0.52 3 12875513 12879313

Neighbor

gene id symbol gene type direction distance location
LOC122353879 arf4b,LOC107597172,LOC107747513,LOC107680530,LOC107557402,LOC107712993,LOC107657960 coding upstream 137873 12732754 ~ 12737640 (+)
pde12 pde12,LOC107682749,LOC107680466 coding upstream 155648 12715876 ~ 12719865 (+)
atp6ap1la atp6ap1la,LOC107557415,LOC107597174,LOC107747526,LOC107657959,LOC107712951,LOC107680564 coding upstream 160582 12702307 ~ 12714931 (+)
si:ch73-106k19.2 si:ch73-106k19.2,LOC107712967,LOC107557404,LOC107680468 coding upstream 262983 12609912 ~ 12612530 (+)
LOC122353873 NA coding upstream 272673 12601083 ~ 12602840 (+)
LOC122353848 LOC107657964,LOC107741992,LOC107680499,LOC108442067,LOC108271057 coding downstream 48017 12927330 ~ 12955366 (+)
LOC122353891 slmapa,slmap,LOC107680512,LOC107657974,LOC107557391 coding downstream 155324 13034637 ~ 13055876 (+)
LOC122353677 LOC107747780 coding downstream 280829 13160142 ~ 13161913 (+)
ctdspl3 ctdspl3,LOC107747402,LOC107680535,LOC107553546,LOC107597167 coding downstream 334995 13214308 ~ 13220680 (+)
ndufs7 ndufs7,LOC107597168,LOC107680537,LOC107747413,LOC107685366,LOC107553547 coding downstream 342526 13221839 ~ 13226883 (+)
G81393 LOC107557402 non-coding upstream 148278 12725794 ~ 12727235 (+)
G81378 asb14,LOC107680484,LOC107579398 non-coding upstream 184515 12689147 ~ 12690998 (+)
G81254 NA non-coding upstream 261862 12612585 ~ 12613651 (+)
G81266 LOC107712996,LOC107657949,LOC107557396 non-coding upstream 281410 12579907 ~ 12594103 (+)
G81261 NA non-coding upstream 303723 12571323 ~ 12571790 (+)
G81421 NA non-coding downstream 8097 12887410 ~ 12889883 (+)
G81422 NA non-coding downstream 10653 12889966 ~ 12896107 (+)
G81424 LOC107680494,LOC107574810 non-coding downstream 86458 12965771 ~ 12976155 (+)
LOC122353896 NA non-coding downstream 98276 12977589 ~ 13019135 (+)
G81427 NA non-coding downstream 268445 13147758 ~ 13228578 (+)
LOC122353861 gpr137b,LOC107740081,LOC107558369,LOC107703026,LOC107713226,LOC105890320,LOC101884293 other upstream 5392 11752545 ~ 12870121 (+)
G81364 rps23,rs23,LOC107680479,LOC106566095,LOC107578001 other upstream 174629 12669789 ~ 12700884 (+)
G81268 NA other upstream 289872 12582915 ~ 12585641 (+)
LOC122353844 LOC107747562,LOC107680562,LOC107597180,LOC107712997,LOC107657970,LOC107557419 other upstream 340087 12531326 ~ 12535426 (+)
G81213 LOC107741992,LOC107680499,LOC107657964,LOC108442067,LOC108271057,LOC107574809 other upstream 650021 12192754 ~ 12225492 (+)
arid3a arid3a,LOC107685377,LOC107680546,LOC107553545,LOC107747603,LOC107597199 other downstream 285448 13164761 ~ 13210690 (+)
G81434 NA other downstream 349630 13228943 ~ 13231092 (+)
LOC122354403 LOC107747219,LOC107747210,LOC107680505,LOC107757944,LOC107597155,LOC559131,LOC107580225,LOC107685131 other downstream 494708 13374021 ~ 13383843 (+)
ranbp3a LOC107597153,LOC107680549,LOC107757943,LOC107685118 other downstream 522974 13402287 ~ 13410126 (+)
LOC122353908 vmac,LOC107680554,LOC107757942,LOC107685109 other downstream 581151 13460464 ~ 13465416 (+)

Expression


Co-expression Network