LOC122353861 (gpr137b,LOC107740081,LOC107558369,LOC107703026,LOC107713226,LOC105890320,LOC101884293)


Basic Information

Item Value
gene id LOC122353861
gene name gpr137b,LOC107740081,LOC107558369,LOC107703026,LOC107713226,LOC105890320,LOC101884293
gene type misc
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056709.1
NCBI id CM032078.1
chromosome length 24513629
location 11752545 ~ 12870121 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU120447
tgtgtgtgtgtgtgtgtgtgtgtctgtgtgtgtgtgtgtgtgtgtgtgtgtgtgttcagggcaCGTCTGTGTGTCAGGTGACCCTGATCGGGCTGACGGTGGTCCTGCTGTACTCGTCCCGGGCCTGTTATAATCTGGTGGTCCTGGCTCTGACCGACATCGAGAGCATCAACTCGTTCGATTACGACTGGTACAACGTCTCCGATCAGGCGGATCTGCGCTCCAGTCTCGGAGACGCCGGCTACGTGGTGTTCGGGGTCATCCTGTTCGTCTGGGAGCTGCTGCCCACGTCTCTGGTGGTCTTCTTCTTCCGCGTGAGGAAACCGGCGCAGGACCGGAGCGGCTCTTCCATTCCCAGCCACGTCTTCTCAAACCGCCCGTACTTCTTCGACAATCCCAGGCGCTACGACAGCGACGACGACCTGGCCTGGGCTTCTCACCCCGTGACCACCTCCACCAGGTACACAAACACCACTGACCATCACACTTAGAGATA
>TU120448
gtgtgtgtgtgtctgtgtgtgtgtgtctgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtctgtgtgtgtgtgtgtctgtgtgtgtgtgtgtgtgtgtgtgtgtgtctgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgttcagggcaCGTCTGTGTGTCAGGTGACCCTGATCGGGCTGACGGTGGTCCTGCTGTACTCGTCCCGGGCCTGTTATAATCTGGTGGTCCTGGCTCTGACCGACATCGAGAGCATCAACTCGTTCGATTACGACTGGTACAACGTCTCCGATCAGGCGGATCTGCGCTCCAGTCTCGGAGACGCCGGCTACGTGGTGTTCGGGGTCATCCTGTTCGTCTGGGAGCTGCTGCCCACGTCTCTGGTGGTCTTCTTCTTCCGCGTGAGGAAACCGGCGCAGGACCGGAGCGGCTCTTCCATTCCCAGCCACGTCTTCTCAAACCGCCCGTACTTCTTCGACAATCCCAGGCGCTACGACAGCGACGACGACCTGGCCTGGGCTTCTCACCCCGTGACCACCTCCACCAGGTACACAAACACCACTGACCATCACACTTAGAGATA
>TU120449
tgtgtgtgtgtgtgtgtgtgtgtctgtgtgtgtgtgtgtgtgtgtgtgtgtgtgttcagggcaCGTCTGTGTGTCAGGTGACCCTGATCGGGCTGACGGTGGTCCTGCTGTACTCGTCCCGGGCCTGTTATAATCTGGTGGTCCTGGCTCTGACCGACATCGAGAGCATCAACTCGTTCGATTACGACTGGTACAACGTCTCCGATCAGGTGGGCTTCTCTCGGCTCGTCTCTGTCTGGCTCTGAGTCGGGACTGCAGCCGTGTTTCTCTGCTCCTCAGGCGGATCTGCGCTCCAGTCTCGGAGACGCCGGCTACGTGGTGTTCGGGGTCATCCTGTTCGTCTGGGAGCTGCTGCCCACGTCTCTGGTGGTCTTCTTCTTCCGCGTGAGGAAACCGGCGCAGGACCGGAGCGGCTCTTCCATTCCCAGCCACGTCTTCTCAAACCGCCCGTACTTCTTCGACAATCCCAGGCGCTACGACAGCGACGACGACCTGGCCTGGGCTTCTCACCCCGTGACCACCTCCACCAGGTACACAAACACCACTGACCATCACACTTAGAGATA
>XM_043251751.1
GGAGTGGACGGTGATGAACTGTAGAGGTGTGAGGGGTTCATTCAGGGAGGAGTTcatggaggaggtggaggagccTCGGGAATCATTTACATTACTGCGGAGATTTGAACCCTCGCGACAAAAGAGCCAATCAGCTTCTCCGGATGCCGATCACATgctccctcctctctcctcaCGACTGCAGACGGAGCAGCAGCGCCGGGGCTGATGGGAAGGCTCTGACGGACGCAGACATGCAGGGATGGTCGGGAGCGAACGGCTCCGTGTCTCCTCCGACGCTGAGCCCCAGCATCCCTCCGTTCGTGAAGCTGGGCCTGACTCTGGCCTACACCGTCTTCTACTCGCTGCTCTTCTGCTTCATCTACGCCCAGCTCTGGCTGGTGCTGCGCTACAGACACAAGCGCTTCAGCTACCAGACGGCGTTCCTGTTCCTGTGCCTGCTGTGGGCGGCTCTCCGAGCGCTGCTCTTCTCCTTCTACTTCAGGGACTGCGTGACGGCCAACGCTCTCGGACCCTTCTCCTTCTGGCTGCTCTACTGCTTCCCCGTCTGCCTGCAGTTCTTCACGCTCAGCCTCATGAACCTGTACTGCGCTCAGGTTTTCTTCAAGGCCAAGTCGAAGTACTCTCCTCAGCTCCTTAAATATAAGTCTCCTCTCTACCTGCTGTTCTTCGGTGTGAGTCTGCTCTTTCTTCTGGTCAATCTGAGCTGTGCTCTGCTGGTCAAGATGAGTCAGGCTCAGGTCAAGACCGTGGTTCTGGTGCGAGTGACCATCAACGACTCGCTCTTCGTCCTCTGCGCCGTCTCGCTGGCCGTCTGCCTCTACAAGATCGCCAAGATGTCCCTCGCCAGCATCTACCTGGAGTCCAAGggcaCGTCTGTGTGTCAGGTGACCCTGATCGGGCTGACGGTGGTCCTGCTGTACTCGTCCCGGGCCTGTTATAATCTGGTGGTCCTGGCTCTGACCGACATCGAGAGCATCAACTCGTTCGATTACGACTGGTACAACGTCTCCGATCAGGCGGATCTGCGCTCCAGTCTCGGAGACGCCGGCTACGTGGTGTTCGGGGTCATCCTGTTCGTCTGGGAGCTGCTGCCCACGTCTCTGGTGGTCTTCTTCTTCCGCGTGAGGAAACCGGCGCAGGACCGGAGCGGCTCTTCCATTCCCAGCCACGTCTTCTCAAACCGCCCGTACTTCTTCGACAATCCCAGGCGCTACGACAGCGACGACGACCTGGCCTGGGCTTCTCACCCCGTGACCACCTCCACCAGGTACACAAACACCACTGACCATCACACTTAGAGATAGCAGCCGGAA

Function

symbol description
gpr137b Involved in several processes, including positive regulation of TORC1 signaling; positive regulation of protein localization to lysosome; and regulation of GTPase activity. Located in lysosomal membrane.

NR:

description
PREDICTED: integral membrane protein GPR137B-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU120447 False 496 lncRNA 0.58 3 12867685 12870111
TU120448 False 659 lncRNA 0.56 4 12841957 12870111
TU120449 False 566 lncRNA 0.59 2 12867685 12870111
XM_043251751.1 True 1316 mRNA 0.59 7 11752545 12870121

Neighbor

gene id symbol gene type direction distance location
tbce LOC107715672,LOC107661157,LOC107713241,LOC107574186,LOC107701315,LOC107740075,LOC107564754 coding upstream 37194 11706108 ~ 11715351 (+)
map1lc3c map1lc3c,LOC107701141,LOC107702025 coding upstream 152847 11597790 ~ 11599698 (+)
opn6a LOC107740064,LOC107567633,LOC107702020 coding upstream 204832 11539678 ~ 11547713 (+)
LOC122354143 pfklb,pfkl,LOC108444469 coding upstream 228887 11512333 ~ 11523658 (+)
orc2 orc2,LOC107702034,LOC107702742,LOC107564576,LOC107740071,LOC107564577 coding upstream 252623 11486516 ~ 11499922 (+)
LOC122353848 LOC107657964,LOC107741992,LOC107680499,LOC108442067,LOC108271057 coding downstream 57209 12927330 ~ 12955366 (+)
LOC122353891 slmapa,slmap,LOC107680512,LOC107657974,LOC107557391 coding downstream 164516 13034637 ~ 13055876 (+)
LOC122353677 LOC107747780 coding downstream 290021 13160142 ~ 13161913 (+)
ctdspl3 ctdspl3,LOC107747402,LOC107680535,LOC107553546,LOC107597167 coding downstream 344187 13214308 ~ 13220680 (+)
ndufs7 ndufs7,LOC107597168,LOC107680537,LOC107747413,LOC107685366,LOC107553547 coding downstream 351718 13221839 ~ 13226883 (+)
G80865 NA non-coding upstream 58092 11690440 ~ 11694453 (+)
G80861 NA non-coding upstream 68601 11683460 ~ 11683944 (+)
G80860 NA non-coding upstream 69301 11682924 ~ 11683244 (+)
G80825 NA non-coding upstream 181114 11571102 ~ 11571431 (+)
G80819 NA non-coding upstream 193498 11556962 ~ 11559047 (+)
G81421 NA non-coding downstream 17289 12887410 ~ 12889883 (+)
G81422 NA non-coding downstream 19845 12889966 ~ 12896107 (+)
G81424 LOC107680494,LOC107574810 non-coding downstream 95650 12965771 ~ 12976155 (+)
LOC122353896 NA non-coding downstream 107468 12977589 ~ 13019135 (+)
G81427 NA non-coding downstream 277637 13147758 ~ 13228578 (+)
tomm20b tomm20b,tomm20,LOC107740066,LOC107701232,LOC107661159,LOC107713233 other upstream 52331 11698324 ~ 11700214 (+)
LOC122354243 irf2bp2b,LOC107713243,LOC107564749,LOC107567632,LOC107683260,LOC107740065 other upstream 79588 11580026 ~ 11672957 (+)
eif4a3 eif4a3,LOC107702040 other upstream 217431 11528719 ~ 11535114 (+)
rpl37a rpl37a,RPL37A,zgc:171772,LOC107564751,LOC107567628 other upstream 225503 11525023 ~ 11527042 (+)
LOC122354145 pfkl,pfklb,LOC107564579,LOC108444469 other upstream 244774 11505653 ~ 11507771 (+)
G81416 rala,LOC107694485,LOC107741991,LOC107552396,LOC107713003,LOC107657963,LOC105901921 other downstream 5392 12875513 ~ 12879313 (+)
arid3a arid3a,LOC107685377,LOC107680546,LOC107553545,LOC107747603,LOC107597199 other downstream 294640 13164761 ~ 13210690 (+)
G81434 NA other downstream 358822 13228943 ~ 13231092 (+)
LOC122354403 LOC107747219,LOC107747210,LOC107680505,LOC107757944,LOC107597155,LOC559131,LOC107580225,LOC107685131 other downstream 503900 13374021 ~ 13383843 (+)
ranbp3a LOC107597153,LOC107680549,LOC107757943,LOC107685118 other downstream 532166 13402287 ~ 13410126 (+)

Expression


Co-expression Network