G81421


Basic Information

Item Value
gene id G81421
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056709.1
NCBI id CM032078.1
chromosome length 24513629
location 12887410 ~ 12889883 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU120452
ggggttagggttagggttagggttagggttagggttagggttggggttaggggttaggggttagggttggggttagctGAGTAATGACTGCACTCAGGCATGAGCTTCAGTGTTTAGAGAAGTTTCATATAGTTTAAAGGGTCGCTaagcattaattaatttaaataacacaatATCTTTGTTCAGCACATTAGTGCCATTTTGAAagttagtgttatttatttttatttgttttcctcttccaattttttccacaatttgtaacatttaaatcaatatgcaaacacaaaattaGGATTTTTgctctataataataataataataataataataataataataataataatgtgttttgtagatctctgtttttctctctctatatgtatactgtattttaaaaccagaacacttttttcttttaatcgtcacattttatttgaatgcataatttaaaagaataataaaaaagcattaactGAAATTCAGTTTCATTTCTGCCCAGAATGCACGGATAATACACAATCTGACATCGTTAAATACAACGTGAAATAAACTGATTGTCCCTTCGAAGGTATTGAAAATGCTTGTCATTTCTCCCACAAAGTCTGAGTTACAGTATGAGTACAGGTGCGTTTGGAGTAGAATACACCATTGTTTCAATAAAATACGCCGTATGCATAAAGTATTGCAACAGTGCTTGCAGTGATGAGAAGAATGCCTAAACAGAGAGCCACGTTGTTCAGGATCAGCGCCGCTCTGGAGCTTCTCACCGCTAACTCTCGCTGTCCAGAAACGTTAGCATCTCGAGTCTGTGAAAAACCCCCGAAAATCACAAAGCCAAAGGTATTAAAGTGAAGTTTGAAATCCCCTTAATATCCAGGAGCTTCAAGAACTGTTTAATAGATATCAGTCCATGCATGATGAGATAAAGTGTTGGCAAAATCAAACAACATGTGAGCGGTTTGtattaatgttagttttttttcccctcttacATACTAATAATCCTGCATTTTCAGTCTGCAATAACTGGTTTTGCGTACTATCTGTGACTATCTCAAATACTTTCCAGCATAACTGAAACGCATCAATAGCAGATATGCACTACGATAAAAAACGCCATCATAACTTAAGCAGCATAAGAAGCTGTTTTGTGCTGATGAGCTGCACACAAAGCAGGCTTATGCACGTTAAACGTTTCAGTCTtttgttaaaatagaaatggaTAGGTCATTGCTTTTGATGACTCAAATGTAGTCTAAATCCAAGGTTCAAAGGTATAACCTTAATTATGCTCTAATCTCGCCTGTAAATCAAGCTGTCTGACGAGGTGTCTATGACATCGTTCATTTACAGGAACtgtaaagttttg

Function

GO:

id name namespace
GO:0006032 chitin catabolic process biological_process
GO:0046348 amino sugar catabolic process biological_process
GO:1901072 glucosamine-containing compound catabolic process biological_process
GO:0006026 aminoglycan catabolic process biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU120452 True 1376 lncRNA 0.35 2 12887410 12889883

Neighbor

gene id symbol gene type direction distance location
LOC122353879 arf4b,LOC107597172,LOC107747513,LOC107680530,LOC107557402,LOC107712993,LOC107657960 coding upstream 149770 12732754 ~ 12737640 (+)
pde12 pde12,LOC107682749,LOC107680466 coding upstream 167545 12715876 ~ 12719865 (+)
atp6ap1la atp6ap1la,LOC107557415,LOC107597174,LOC107747526,LOC107657959,LOC107712951,LOC107680564 coding upstream 172479 12702307 ~ 12714931 (+)
si:ch73-106k19.2 si:ch73-106k19.2,LOC107712967,LOC107557404,LOC107680468 coding upstream 274880 12609912 ~ 12612530 (+)
LOC122353873 NA coding upstream 284570 12601083 ~ 12602840 (+)
LOC122353848 LOC107657964,LOC107741992,LOC107680499,LOC108442067,LOC108271057 coding downstream 37447 12927330 ~ 12955366 (+)
LOC122353891 slmapa,slmap,LOC107680512,LOC107657974,LOC107557391 coding downstream 144754 13034637 ~ 13055876 (+)
LOC122353677 LOC107747780 coding downstream 270259 13160142 ~ 13161913 (+)
ctdspl3 ctdspl3,LOC107747402,LOC107680535,LOC107553546,LOC107597167 coding downstream 324425 13214308 ~ 13220680 (+)
ndufs7 ndufs7,LOC107597168,LOC107680537,LOC107747413,LOC107685366,LOC107553547 coding downstream 331956 13221839 ~ 13226883 (+)
G81393 LOC107557402 non-coding upstream 160175 12725794 ~ 12727235 (+)
G81378 asb14,LOC107680484,LOC107579398 non-coding upstream 196412 12689147 ~ 12690998 (+)
G81254 NA non-coding upstream 273759 12612585 ~ 12613651 (+)
G81266 LOC107712996,LOC107657949,LOC107557396 non-coding upstream 293307 12579907 ~ 12594103 (+)
G81261 NA non-coding upstream 315620 12571323 ~ 12571790 (+)
G81422 NA non-coding downstream 83 12889966 ~ 12896107 (+)
G81424 LOC107680494,LOC107574810 non-coding downstream 75888 12965771 ~ 12976155 (+)
LOC122353896 NA non-coding downstream 87706 12977589 ~ 13019135 (+)
G81427 NA non-coding downstream 257875 13147758 ~ 13228578 (+)
G81448 NA non-coding downstream 420438 13310321 ~ 13312912 (+)
G81416 rala,LOC107694485,LOC107741991,LOC107552396,LOC107713003,LOC107657963,LOC105901921 other upstream 8097 12875513 ~ 12879313 (+)
LOC122353861 gpr137b,LOC107740081,LOC107558369,LOC107703026,LOC107713226,LOC105890320,LOC101884293 other upstream 17289 11752545 ~ 12870121 (+)
G81364 rps23,rs23,LOC107680479,LOC106566095,LOC107578001 other upstream 186526 12669789 ~ 12700884 (+)
G81268 NA other upstream 301769 12582915 ~ 12585641 (+)
LOC122353844 LOC107747562,LOC107680562,LOC107597180,LOC107712997,LOC107657970,LOC107557419 other upstream 351984 12531326 ~ 12535426 (+)
arid3a arid3a,LOC107685377,LOC107680546,LOC107553545,LOC107747603,LOC107597199 other downstream 274878 13164761 ~ 13210690 (+)
G81434 NA other downstream 339060 13228943 ~ 13231092 (+)
LOC122354403 LOC107747219,LOC107747210,LOC107680505,LOC107757944,LOC107597155,LOC559131,LOC107580225,LOC107685131 other downstream 484138 13374021 ~ 13383843 (+)
ranbp3a LOC107597153,LOC107680549,LOC107757943,LOC107685118 other downstream 512404 13402287 ~ 13410126 (+)
LOC122353908 vmac,LOC107680554,LOC107757942,LOC107685109 other downstream 570581 13460464 ~ 13465416 (+)

Expression


Co-expression Network