G81427


Basic Information

Item Value
gene id G81427
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056709.1
NCBI id CM032078.1
chromosome length 24513629
location 13147758 ~ 13228578 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU120464
ctttttttttttttttttttttataattatgtagtGTTTATTTCGATGTAGcgtaatcaaaaataaaagaaataaaaggctTTGAGTGGCACAAACTAGGCATTTTACAAAACGTTTCCCAGTCATTTTGCGAGAATTAAATGCAATTGACTCTTACAAACGAATCAtatgatttcatttcaaaaacactTGACAGATTTATCTTTTATACACAGTCAGTTTTTCCCTCATTCTTTAATAATAGTTGGCGTGATCAtcttattaaaggaatagtattTGCATTCACTGGGAGGACTGATGTCCATCAGCGTGGTGCTGATCTTCTCCTTGTTGAATCCCGCTTCCGCCAGGTGGGGAACTTGTGTTTCTGGAACATTTTGTCGATGTCGTTGTATTTGCTTTTCAGCAGCTCGCCCCAGGAAGTGAGGTTACAGTACGTGAGCACGCCGCCGGGCTTCAGCAGTCTGTTAGCATGACCCTGACAACACAGTTCACTGCGATTAGCAAATCACTCGCCGCAAACATCGGCCCAAATGGTTTCAATGTCACTGCCTTCCAACCTTGATAAAGTTGAACTGGTGCGTGTGCCAGGTCTCCTCCGACAGAGGATATGTGTCGTAAAGAATACCTGCGATGGGGGGACAAATATATGAACGTAGGTTACAAATGTCCTTATTGGAGCACAGAACCATAAGTCAGAACCAACAGCCAACGATGCACTGTAGGGTTTCATTAATGCCAAAAGTCTTTAGGGCGTTAGAGATCATGTTtcgtgaagatattttgcacaGTTCCCAGCATAAGTCTAATTTTTAATTGGCAAATTTAAAGGTTGTgcaaatctcaatttcaaaacatttttt

Function

GO: NA

KEGG:

id description
ko00260 Glycine, serine and threonine metabolism

RNA

RNA id representative length rna type GC content exon number start site end site
TU120464 True 863 lncRNA 0.40 3 13147758 13228578

Neighbor

gene id symbol gene type direction distance location
LOC122353891 slmapa,slmap,LOC107680512,LOC107657974,LOC107557391 coding upstream 91882 13034637 ~ 13055876 (+)
LOC122353848 LOC107657964,LOC107741992,LOC107680499,LOC108442067,LOC108271057 coding upstream 192392 12927330 ~ 12955366 (+)
LOC122353879 arf4b,LOC107597172,LOC107747513,LOC107680530,LOC107557402,LOC107712993,LOC107657960 coding upstream 410118 12732754 ~ 12737640 (+)
pde12 pde12,LOC107682749,LOC107680466 coding upstream 427893 12715876 ~ 12719865 (+)
atp6ap1la atp6ap1la,LOC107557415,LOC107597174,LOC107747526,LOC107657959,LOC107712951,LOC107680564 coding upstream 432827 12702307 ~ 12714931 (+)
dazap1 dazap1,LOC107680526,LOC107757952,LOC107747374,LOC107685225 coding downstream 5187 13233765 ~ 13252149 (+)
rps15 rps15,rig,LOC107685215,LOC107578086 coding downstream 24773 13253351 ~ 13255161 (+)
ushbp1 ushbp1,LOC107747291,LOC107680560,LOC107685353 coding downstream 88002 13316580 ~ 13329122 (+)
nr2f6b nr2f6b,LOC107680506,LOC107747262 coding downstream 107541 13336119 ~ 13346199 (+)
tax1bp3 tax1bp3,LOC107685157,LOC107747253,LOC107680510 coding downstream 118544 13347122 ~ 13351332 (+)
LOC122353896 NA non-coding upstream 128623 12977589 ~ 13019135 (+)
G81424 LOC107680494,LOC107574810 non-coding upstream 171603 12965771 ~ 12976155 (+)
G81420 NA non-coding upstream 223587 12865979 ~ 12924171 (+)
G81422 NA non-coding upstream 251651 12889966 ~ 12896107 (+)
G81421 NA non-coding upstream 257875 12887410 ~ 12889883 (+)
G81448 NA non-coding downstream 81743 13310321 ~ 13312912 (+)
G81454 NA non-coding downstream 85984 13314562 ~ 13315699 (+)
G81458 NA non-coding downstream 121356 13349934 ~ 13393135 (+)
G81468 LOC107747585,LOC107680549,LOC107597153,LOC107757943 non-coding downstream 178100 13406678 ~ 13651018 (+)
LOC122354466 NA non-coding downstream 181902 13410480 ~ 13413881 (+)
slmapa slmapa,slmap,LOC107680512,LOC107657974,LOC107557391 other upstream 90538 12768207 ~ 13057220 (+)
G81416 rala,LOC107694485,LOC107741991,LOC107552396,LOC107713003,LOC107657963,LOC105901921 other upstream 268445 12875513 ~ 12879313 (+)
G81364 rps23,rs23,LOC107680479,LOC106566095,LOC107578001 other upstream 446874 12669789 ~ 12700884 (+)
G81268 NA other upstream 562117 12582915 ~ 12585641 (+)
LOC122353844 LOC107747562,LOC107680562,LOC107597180,LOC107712997,LOC107657970,LOC107557419 other upstream 612332 12531326 ~ 12535426 (+)
G81434 NA other downstream 365 13228943 ~ 13231092 (+)
LOC122354403 LOC107747219,LOC107747210,LOC107680505,LOC107757944,LOC107597155,LOC559131,LOC107580225,LOC107685131 other downstream 145443 13374021 ~ 13383843 (+)
ranbp3a LOC107597153,LOC107680549,LOC107757943,LOC107685118 other downstream 173709 13402287 ~ 13410126 (+)
LOC122353908 vmac,LOC107680554,LOC107757942,LOC107685109 other downstream 231886 13460464 ~ 13465416 (+)
LOC122353915 vmac,LOC107680554,LOC107685109,LOC107757942 other downstream 472657 13701235 ~ 13704975 (+)

Expression


Co-expression Network