G81434


Basic Information

Item Value
gene id G81434
gene name NA
gene type unknown
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056709.1
NCBI id CM032078.1
chromosome length 24513629
location 13228943 ~ 13231092 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU120480
tagatattttctGCTCAGtgcaatttaatacattttatatattattagacTAAATGTTTTactacttttaaaagtttgggatcgctaagatatttttttctatttttgaaaaacataatcATAGCAAATATGCAACATAATGCAAAGAAAATTCTCACAAAAgaaagcatcattactccagtcttcagtgtcacatgaaaacAGCTGTGTGGCTTATTTCATGCGAAAATGCAATTTgttcagaattttaaaaaaaccttttggcTAATCTAACGCATCCTCGTTGACTAAAGGTTTTtcgtatatttgtatattttctacGCAGTCACTTTCGCCTCTTTTGTCGTGCATGTGACATGTTTGAGCaacctttaaatgtttatttgttttgcattatactaaatattaaagttattttaccGTCGAAGTGATTGTCGGGCAGGGTAGGCACCACTTCTTCCCACAGGCCTTTCAGAGGAACGACCTGTgcaagtatataaataaagttttagaaGCCATAAGCTGCTTTGTAACAACTCCACACCATTTGCAGATACAGATATGTTTCATTTACTTTATGTGGCTGACTTTTGGCCCATTCCTGCAGCCTCTGGAAAACACCATCGTTGCACTCAATGATCCAATGCTCCTCGATGGGGAAGGACTCCACTTTAGTGGCCGCTATGGCCATTCCAAAGCCAATCTCCAGCACCCTTCCACCTACCTTTGGACGCTGCAACTGTTGCAAGAGAGTGCATGTATGGAGTTTCCCAGCGCTCCATGACGGGTTTCCCCATGATCTCCAAGTGCGTGTCGGTCTCATTGTAGTCAGCGCTCGCGCCGTGCCACACTTGCTTGCAGTTTTCTCCCTTCGAGAAGATCGGCTGAGCGGTGGTCATGGTGGACTGCTGGACGTCGACAGATGTGGCGCGGGTGTCGTATCGACGCG

Function

GO:

id name namespace
GO:0008152 metabolic process biological_process
GO:0055114 oxidation-reduction process biological_process

KEGG:

id description
ko00260 Glycine, serine and threonine metabolism

RNA

RNA id representative length rna type GC content exon number start site end site
TU120480 True 949 TUCP 0.42 2 13228943 13231092

Neighbor

gene id symbol gene type direction distance location
ndufs7 ndufs7,LOC107597168,LOC107680537,LOC107747413,LOC107685366,LOC107553547 coding upstream 2060 13221839 ~ 13226883 (+)
ctdspl3 ctdspl3,LOC107747402,LOC107680535,LOC107553546,LOC107597167 coding upstream 8263 13214308 ~ 13220680 (+)
LOC122353677 LOC107747780 coding upstream 67030 13160142 ~ 13161913 (+)
LOC122353835 flnb,LOC107680511,LOC107657976,LOC107712990 coding upstream 70073 12824930 ~ 13158870 (+)
LOC122353891 slmapa,slmap,LOC107680512,LOC107657974,LOC107557391 coding upstream 173067 13034637 ~ 13055876 (+)
dazap1 dazap1,LOC107680526,LOC107757952,LOC107747374,LOC107685225 coding downstream 2673 13233765 ~ 13252149 (+)
rps15 rps15,rig,LOC107685215,LOC107578086 coding downstream 22259 13253351 ~ 13255161 (+)
ushbp1 ushbp1,LOC107747291,LOC107680560,LOC107685353 coding downstream 85488 13316580 ~ 13329122 (+)
nr2f6b nr2f6b,LOC107680506,LOC107747262 coding downstream 105027 13336119 ~ 13346199 (+)
tax1bp3 tax1bp3,LOC107685157,LOC107747253,LOC107680510 coding downstream 116030 13347122 ~ 13351332 (+)
G81427 NA non-coding upstream 365 13147758 ~ 13228578 (+)
LOC122353896 NA non-coding upstream 209808 12977589 ~ 13019135 (+)
G81424 LOC107680494,LOC107574810 non-coding upstream 252788 12965771 ~ 12976155 (+)
G81420 NA non-coding upstream 304772 12865979 ~ 12924171 (+)
G81448 NA non-coding downstream 79229 13310321 ~ 13312912 (+)
G81454 NA non-coding downstream 83470 13314562 ~ 13315699 (+)
G81458 NA non-coding downstream 118842 13349934 ~ 13393135 (+)
G81468 LOC107747585,LOC107680549,LOC107597153,LOC107757943 non-coding downstream 175586 13406678 ~ 13651018 (+)
LOC122354466 NA non-coding downstream 179388 13410480 ~ 13413881 (+)
arid3a arid3a,LOC107685377,LOC107680546,LOC107553545,LOC107747603,LOC107597199 other upstream 18253 13164761 ~ 13210690 (+)
slmapa slmapa,slmap,LOC107680512,LOC107657974,LOC107557391 other upstream 171723 12768207 ~ 13057220 (+)
G81416 rala,LOC107694485,LOC107741991,LOC107552396,LOC107713003,LOC107657963,LOC105901921 other upstream 349630 12875513 ~ 12879313 (+)
G81364 rps23,rs23,LOC107680479,LOC106566095,LOC107578001 other upstream 528059 12669789 ~ 12700884 (+)
G81268 NA other upstream 643302 12582915 ~ 12585641 (+)
LOC122354403 LOC107747219,LOC107747210,LOC107680505,LOC107757944,LOC107597155,LOC559131,LOC107580225,LOC107685131 other downstream 142929 13374021 ~ 13383843 (+)
ranbp3a LOC107597153,LOC107680549,LOC107757943,LOC107685118 other downstream 171195 13402287 ~ 13410126 (+)
LOC122353908 vmac,LOC107680554,LOC107757942,LOC107685109 other downstream 229372 13460464 ~ 13465416 (+)
LOC122353915 vmac,LOC107680554,LOC107685109,LOC107757942 other downstream 470143 13701235 ~ 13704975 (+)
G81717 NA other downstream 656241 13887333 ~ 14306577 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) G245346 NA non-coding CI01000057 null 3849171 ~ 3851942 (+)
striped catfish (Pangasianodon hypophthalmus) G235395 LOC108278883 non-coding NC_047609.1 CM018555.1 5153492 ~ 5172125 (+)