G81578 (LOC107747780)


Basic Information

Item Value
gene id G81578
gene name LOC107747780
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056709.1
NCBI id CM032078.1
chromosome length 24513629
location 13160173 ~ 13161310 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU120731
atacatttttaaaaataaaaaaaaagttataaacaACGGTTAAAGCTAtggatttttatataaatattgaaaatgtttctagttttaaaattaaagagcGCAAATAATTGACAGactggacatttttaaaaataaaaaaggttataaaaaatggttaaaagaataggtttttatataaatatttaaaatatttctagttttaaaattatgacGTAAATAACTGATAgactgaacatttttaaaaaataaaaaaaagttagaaacAACGGTTAAAGGAATAggtttttatagaaatattttaaatatttctagttttaaaattataacgtaaataactgacAGACTGAGCGCCGAGTagcggcttcttggctgacttctgactcgacgTATGACGTACGACGTAAGTTGCGTCATACGTCGAGACAAGAAGCCGGAACCCTGCGTTCTCGCAGAAAATCAACATGGGTCAATTATCTTAGTTTCGTTATAAAACCCAGTTGACCTTCTTCCGAAGATgtacaggttagttttacgtcgGATATATCCAATTTACGGAGCTtgaaaataatggccgctattcACCAGCATTAGCTTTAAACAACTCCcgactgaaagaagaaagtcgtacacctaggatggcttcgggGACGAAAGAATCGGATAGTCAAACTTTTCTTCAGGACCTTTCTGCGCCCGTTTCTTCAAATACAAACCCCGTCCTTTGCCTTCGTTGGATAAGCCGTGATAAAGAGCGGCTGCGGTCCGCGGACTCACGGGTCTCATGAGCGGGGCTTCACTCAACGAGCGGCGGGCCACCGGCTTCTTCTCCCGCGGCTGGAGCACCGGAGGCAGCGTGACTTTACCGACAGACGGAGGCCCGATGGACTCGGACCTGCGGGACGCGAAGGCGGTCGGGTAGTCTTTACCGTATTTCGTCTTCCACGCCAGCCGCGTGTAGGCCTCCTTCAGGATCAGCTCGCGGTAGAAGCTCTGGTCTTGAGTGGTCAGAAGGTTCCTCATGGCTGACGTCCGCGTCTCTGACCGATTAGTCCGAG

Function

NR:

description
PREDICTED: uncharacterized protein LOC107747780

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU120731 True 1055 lncRNA 0.42 2 13160173 13161310

Neighbor

gene id symbol gene type direction distance location
LOC122353867 sult6b1,LOC107680496,LOC107552400,LOC107744587,LOC107713000,LOC107557424,LOC107657965 coding downstream 160047 12995247 ~ 13000126 (-)
slc29a1b slc29a1b,LOC107712971,LOC107741993,LOC107552398,LOC107680494,LOC107557422 coding downstream 178333 12967576 ~ 12981840 (-)
dennd6aa dennd6a,LOC107680547,LOC107657973,LOC107597203,LOC107712949 coding downstream 393507 12747106 ~ 12766666 (-)
LOC122353868 NA coding downstream 416028 12738000 ~ 12744145 (-)
LOC122353875 arf4b,LOC107597172,LOC107557402,LOC107747513,LOC107680530,LOC107712993,LOC107657960 coding downstream 428056 12729331 ~ 12732117 (-)
gamt gamt,LOC107747770,LOC107597217,LOC107685360,LOC107680536,LOC107553529,LOC107757934 coding upstream 66335 13227645 ~ 13231143 (-)
abhd8b abhd8b,abhd8,LOC107747334,LOC107578087,LOC107680465 coding upstream 95327 13256637 ~ 13261242 (-)
dda1 dda1,LOC107685208,LOC105913185 coding upstream 100074 13261384 ~ 13264933 (-)
ano8b ano8,ano8b,LOC107685197,LOC107680545,LOC107597162,LOC107747324 coding upstream 105524 13266834 ~ 13287916 (-)
plvapb plvap,LOC107680480,LOC107747760,LOC107597160,LOC107685179,LOC107757946 coding upstream 141035 13302345 ~ 13307142 (-)
G81540 NA non-coding downstream 112023 13047571 ~ 13048150 (-)
G81528 NA non-coding downstream 161556 12965796 ~ 12998617 (-)
G81524 NA non-coding downstream 264327 12893939 ~ 12895846 (-)
G81522 NA non-coding downstream 269957 12888928 ~ 12890216 (-)
G81514 NA non-coding downstream 289927 12867678 ~ 12870246 (-)
G81605 NA non-coding upstream 57654 13218964 ~ 13220664 (-)
G81608 NA non-coding upstream 61215 13222525 ~ 13224861 (-)
G81611 NA non-coding upstream 72491 13233801 ~ 13246273 (-)
G81609 rps15,LOC107680474,LOC107685215,LOC107578086 non-coding upstream 92100 13253410 ~ 13313479 (-)
G81619 ushbp1,LOC107680560,LOC107747291,LOC107597197 non-coding upstream 158856 13320166 ~ 13322021 (-)
G81512 NA other downstream 102292 12817753 ~ 13057881 (-)
vipb LOC107557425,LOC107657966,LOC107680498,LOC107713001,LOC107741995,LOC107552401 other downstream 170216 12984373 ~ 12989957 (-)
LOC122353859 NA other downstream 194540 12956861 ~ 12965633 (-)
G81523 NA other downstream 264043 12890281 ~ 12896130 (-)
hesx1 hesx1,LOC107712966,LOC107657957,LOC107557393,LOC107680467 other downstream 492585 12663831 ~ 12667588 (-)
ccl25b LOC107680477 other upstream 188626 13349936 ~ 13394008 (-)
ccl44 ccl44,LOC107597158,LOC107685327,LOC107553533 other upstream 205257 13366567 ~ 13369997 (-)
G81663 NA other upstream 411421 13572731 ~ 13593554 (-)
G81666 vmac,LOC107757942,LOC107680554,LOC107685109 other upstream 444962 13606272 ~ 13609604 (-)
G81650 NA other upstream 536789 13698099 ~ 13699958 (-)

Expression


Co-expression Network