ccl44 (ccl44,LOC107597158,LOC107685327,LOC107553533)


Basic Information

Item Value
gene id ccl44
gene name ccl44,LOC107597158,LOC107685327,LOC107553533
gene type misc
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056709.1
NCBI id CM032078.1
chromosome length 24513629
location 13366567 ~ 13369997 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU120832
agaggagagaaataaaaacagcacaagaGGACAGCAGGCAGCACGGAGGAAAAAATCCCTCTGAGGTTCCACCATGTTCCTGCAGACTGTCTCCATCCTCTTCCTCTCGGCCGTCCTCTTCGGCTGCCTGGAAGGGAAGGGTGTGCAAATGCAACGAGATGTTCAGTGCTGCATGCAGTACTCTCACGGCAAAGTCCGGACCAAAGACGTCCTGAGGTATGAGAGGCAGACGGAGGGGCCGGATTGCAGCATAAGAGCCATCATGCAAGTATTCCAGGCATCCTGGAGCAATCACAGACATGGAAAATATGCCCTATTAAAGCTCACAGGCATTGCCGTCTAAGCAGGTCAGATTTTTATTACTGAGAGCGGTAATTGTCAGGCAAGTAGAGCAAAAGAATGCACTCAGGCTGGGTGGACAATGCCCAAACTGTTTCTTCACCGAAGCCAATTTGGCCTGCGCTGACTTGAAGCGCAGCAGATTAAGAGATTTGGGATTTGCCGTATGTAAAGAGAGAGGTTTTGGAGGGAGCTCTCGAGATCTTGGCGCTCATGTTCTCGCTTGTTTCAATCATGACAGATTGTACACCAAAAAGGCGGTGAAGTGCGCCGATCCAAGGGACAGGAAGGTGAAGAGGTTACTACGGAAACTGAACCAGAGGATGGGAGCCAAATCCCGCAGGACCATGTGGCTACATCCGCATATGAATCTGCCCGTCATGTCGGAGGTCGCCGTTGTTAACTCCCAAAAGATGAACAAGGTAAACAAGAATCGGCAGGATGCCATTTCGGTGCAACAGTTCTGAAAGTAAAAATCCCATTCTTATTTCCCTTGGATGAACTGATTTCTAGCTTTAATGTATAAACCCGACAGACCTACCATAAGTTTAGAGGTTAAGGAATGTTGTATGATTCTGCATACAGAAACAATCAATATGATTTTAActtaatatgaaacaaaatttgTGTTCAATTTGGTTCCCGGGTGAAGAACTACACTAGTCAGTTATATTCgctgttaccatggaaacagaCATTTCAACCAATCAAAAGACTTCGAAATGAGAATATAAACGTGGATTTATAAATTATTCTGGCCTagactgtatgtatatatataatgaccaATATAAAATTGAAGACAACTCAAGCAGATATATTTTTTCgaaatattagtaaaatataaaatgtccaAAATCAGTCTATATGATACTGCGCGTCAATAGTTGTAAAAGGcttaatcaaatttaaattatcTAAAATTTCTATATGTTTCATACGCTATTTTGTAATACACTGCAAACATAAGCTATTTATATTAAgaactttttatattgtttctgATTCGTTTATACAATTCGTAAAGCTTCATAAGATTGGCTTCCAAATTTTATTATCTAGATGCAAGCCTATTCGGTTCATTTTACGCTTTCATGTCTTTGTAATCTTAGTGAATACTGATATAACCACgcttcctttcctttccttttagACCAAGTGAATGTTGAAGGAGGACAGGTGATTCATGAAACCCCAGCCTTCTCGTGTGTCACTGTTTTCTTATATGTTCTTATAAGAAAATACATGTAGACTCATAGCATTCACTACCAAACAGTATGTTATCCAGATATATTGTGATATTTAGATGTCCTCTCAAATGACTGTTAATCTATATGCCAAAGTATTCTTCTCTGAGACTTGTTAAAGGTTGTTTATAATCTCTGCAGCTATGTATAGTCTCTATAACTTATACAAGCTCTTCTATAGAGTCCAGTAAACTGGTATGACTGTTCTCGATCAATTTATAGTGCAATTACAGATTATCTTGTGTATGTTAAAACACaactaatttttatatataaaaataaatgaaaatggtg
>XM_043252566.1
CACTTATTTCGTCATgagatgcattcatttttggCCAAGATCTCTTATTTAACAATGGGAAAGTAAAACCGCTCCGTAAAGTCACATCCCAAAGTCTTTCAATGGGGTTAAGCTCAGGCCTCTGTGATGGGCGATTCGTACATGAAAACGATTCCTCATGCTCAGGAAAACACTATTTTACAATTTGGTTCCAATGAATCTTGACGTGGGCACATCTGACAAGGACTGCtcatctggacttaggtttctGGCTCATTGCCACCTCTCCGTCCTCTATTGTGTTCTCGTACtcaagtaaatgaaaaaaaagaaataaaaaagttgtgTGCATATGCTGAAAGCCTGTGAACTTGTTCTTGGTGGCATGTTTTCTTCAGTGTGATACCttaattgcctttaaaaaaaaaatgcaggagAGACGACTGGCCAATGGATGCGAGTGAGGTCATGGGCTGAGTATGTTTTTGCCGTTTTCGCACGCTTTACACATCCGCCTTGGACATGCAGATGGCATATTTTCGATCTAATGACCCCAGGTATGCCAAACCCATAAAGTCCCGACAGTTTTCTCCACATGACTCAAGAACTCGGCATGAGGACGGGCTCTAAATGTCTGCACATGAGTATCCATATTGATTCCTGATGTTTCGTTCGTTCAGATGTCTCCTCCCTTCGAGTCAGACCCCAGGACTGCATTTCATCCAGCTCCAAGATTTTCGACCGCAATAAATCATAAGTTTGCAAAAAGTTGGCCATTTTAATATAAGGTGTTTCCTCTCTTCAGCATTCGACGTCGGACGCATACATCACCGTGGACTGCTGTTTTTAATCTCGTTTCTTCGAATATAAGAAGAATGAGTTTTTTCTTAATTACAGAGATCTCTGCCGTTGCAAATTCTCGAGCGAACGCGGGCGACGGGCTCGAAATTGCAGCGTTTATGCTACGCGTCGCACCAGCACTTGCGCAGCTCAACGTGTTAATTGAAGAGAGTTGTGCGTTTCTCAACAGCGAGGGGAGATGCTACGACTGTGAAAACAGCACACGAGGGGGGGAGCGAGGGAGATTGTGGGTGTGTTAGCGCGTGAGAGAAAAAATAGGggaagggagggagagaggagagaaataaaaacagcacaagaGGACAGCAGGCAGCACGGAGGAAAAAATCCCTCTGAGGTTCCACCATGTTCCTGCAGACTGTCTCCATCCTCTTCCTCTCGGCCGTCCTCTTCGGCTGCCTGGAAGGGAAGGGTGTGCAAATGCAACGAGATGTTCAGTGCTGCATGCAGTACTCTCACGGCAAAGTCCGGACCAAAGACGTCCTGAGGTATGAGAGGCAGACGGAGGGGCCGGATTGCAGCATAAGAGCCATCATATTGTACACCAAAAAGGCGGTGAAGTGCGCCGATCCAAGGGACAGGAAGGTGAAGAGGTTACTACGGAAACTGAACCAGAGGATGGGAGCCAAATCCCGCAGGACCATGTGGCTACATCCGCATATGAATCTGCCCGTCATGTCGGAGGTCGCCGTTGTTAACTCCCAAAAGATGAACAAGGTAAACAAGAATCGGCAGGATGCCATTTCGGTGCAACAGTTCTGAAAGTAAAAATCCCATTCTTATTTCCCTTGGATGAACTGATTTCTAGCTTTAATGTATAAACCCGACAGACCTACCATAAGTTTAGAGGTTAAGGAATGTTGTATGATTCTGCATACAGAAACAATCAATATGATTTTAActtaatatgaaacaaaatttgTGTTCAATTTGGTTCCCGGGTGAAGAACTACACTAGTCAGTTATATTCgctgttaccatggaaacagaCATTTCAACCAATCAAAAGACTTCGAAATGAGAATATAAACGTGGATTTATAAATTATTCTGGCCTagactgtatgtatatatataatgaccaATATAAAATTGAAGACAACTCAAGCAGATATATTTTTTCgaaatattagtaaaatataaaatgtccaAAATCAGTCTATATGATACTGCGCGTCAATAGTTGTAAAAGGcttaatcaaatttaaattatcTAAAATTTCTATATGTTTCATACGCTATTTTGTAATACACTGCAAACATAAGCTATTTATATTAAgaactttttatattgtttctgATTCGTTTATACAATTCGTAAAGCTTCATAAGATTGGCTTCCAAATTTTATTATCTAGATGCAAGCCTATTCGGTTCATTTTACGCTTTCATGTCTTTGTAATCTTAGTGAATACTGATATAACCACgcttcctttcctt
>XM_043252567.1
CACTTATTTCGTCATgagatgcattcatttttggCCAAGATCTCTTATTTAACAATGGGAAAGTAAAACCGCTCCGTAAAGTCACATCCCAAAGTCTTTCAATGGGGTTAAGCTCAGGCCTCTGTGATGGGCGATTCGTACATGAAAACGATTCCTCATGCTCAGGAAAACACTATTTTACAATTTGGTTCCAATGAATCTTGACGTGGGCACATCTGACAAGGACTGCtcatctggacttaggtttctGGCTCATTGCCACCTCTCCGTCCTCTATTGTGTTCTCGTACtcaagtaaatgaaaaaaaagaaataaaaaagttgtgTGCATATGCTGAAAGCCTGTGAACTTGTTCTTGGTGGCATGTTTTCTTCAGTGTGATACCttaattgcctttaaaaaaaaaatgcaggagAGACGACTGGCCAATGGATGCGAGTGAGGTCATGGGCTGAGTATGTTTTTGCCGTTTTCGCACGCTTTACACATCCGCCTTGGACATGCAGATGGCATATTTTCGATCTAATGACCCCAGGTATGCCAAACCCATAAAGTCCCGACAGTTTTCTCCACATGACTCAAGAACTCGGCATGAGGACGGGCTCTAAATGTCTGCACATGAGTATCCATATTGATTCCTGATGTTTCGTTCGTTCAGATGTCTCCTCCCTTCGAGTCAGACCCCAGGACTGCATTTCATCCAGCTCCAAGATTTTCGACCGCAATAAATCATAAGTTTGCAAAAAGTTGGCCATTTTAATATAAGGTGTTTCCTCTCTTCAGCATTCGACGTCGGACGCATACATCACCGTGGACTGCTGTTTTTAATCTCGTTTCTTCGAATATAAGAAGAATGAGTTTTTTCTTAATTACAGAGATCTCTGCCGTTGCAAATTCTCGAGCGAACGCGGGCGACGGGCTCGAAATTGCAGCGTTTATGCTACGCGTCGCACCAGCACTTGCGCAGCTCAACGTGTTAATTGAAGAGAGTTGTGCGTTTCTCAACAGCGAGGGGAGATGCTACGACTGTGAAAACAGCACACGAGGGGGGGAGCGAGGGAGATTGTGGGTGTGTTAGCGCGTGAGAGAAAAAATAGGggaagggagggagagaggagagaaataaaaacagcacaagaGGACAGCAGGCAGCACGGAGGAAAAAATCCCTCTGAGGTTCCACCATGTTCCTGCAGACTGTCTCCATCCTCTTCCTCTCGGCCGTCCTCTTCGGCTGCCTGGAAGGGAAGGGTGTGCAAATGCAACGAGATGTTCAGTGCTGCATGCAGTACTCTCACGGCAAAGTCCGGACCAAAGACGTCCTGAGGTATGAGAGGCAGACGGAGGGGCCGGATTGCAGCATAAGAGCCATCATATTGTACACCAAAAAGGCGGTGAAGTGCGCCGATCCAAGGGACAGGAAGGTGAAGAGGTTACTACGGAAACTGAACCAGAGGATGGGAGCCAAATCCCGCAGGACCATGTGGCTACATCCGCATATGAATCTGCCCGTCATGTCGGAGGTCGCCGTTGTTAACTCCCAAAAGATGAACAAGGTAAACAAGAATCGGCAGGATGCCATTTCGGTGCAACAGTTCTGAAAACCAAGTGAATGTTGAAGGAGGACAGGTGATTCATGAAACCCCAGCCTTCTCGTGTGTCACTGTTTTCTTATATGTTCTTATAAGAAAATACATGTAGACTCATAGCATTCACTACCAAACAGTATGTTATCCAGATATATTGTGATATTTAGATGTCCTCTCAAATGACTGTTAATCTATATGCCAAAGTATTCTTCTCTGAGACTTGTTAAAGGTTGTTTATAATCTCTGCAGCTATGTATAGTCTCTATAACTTATACAAGCTCTTCTATAGAGTCCAGTAAACTGGTATGACTGTTCTCGATCAATTTATAGTGCAATTACAGATTATCTTGTGTATGTTAAAACACaactaatttttatatataaaaataaatgaaaatgg
>XM_043252568.1
GTTTATGCTACGCGTCGCACCAGCACTTGCGCAGCTCAACGTGTTAATTGAAGAGAGTTGTGCGTTTCTCAACAGCGAGGGGAGATGCTACGACTGTGAAAACAGCACACGAGGGGGGGAGCGAGGGAGATTGTGGGTGTGTTAGCGCGTGAGAGAAAAAATAGGggaagggagggagagaggagagaaataaaaacagcacaagaGGACAGCAGGCAGCACGGAGGAAAAAATCCCTCTGAGGTTCCACCATGTTCCTGCAGACTGTCTCCATCCTCTTCCTCTCGGCCGTCCTCTTCGGCTGCCTGGAAGGGAAGGGTGTGCAAATGCAACGAGATGTTCAGTGCTGCATGCAGTACTCTCACGGCAAAGTCCGGACCAAAGACGTCCTGAGGTATGAGAGGCAGACGGAGGGGCCGGATTGCAGCATAAGAGCCATCATATTGTACACCAAAAAGGCGGTGAAGTGCGCCGATCCAAGGGACAGGAAGGTGAAGAGGTTACTACGGAAACTGAACCAGAGGATGGGAGCCAAATCCCGCAGGACCATGTGGCTACATCCGCATATGAATCTGCCCGTCATGTCGGAGGTCGCCGTTGTTAACTCCCAAAAGATGAACAAGACCAAGTGAATGTTGAAGGAGGACAGGTGATTCATGAAACCCCAGCCTTCTCGTGTGTCACTGTTTTCTTATATGTTCTTATAAGAAAATACATGTAGACTCATAGCATTCACTACCAAACAGTATGTTATCCAGATATATTGTGATATTTAGATGTCCTCTCAAATGACTGTTAATCTATATGCCAAAGTATTCTTCTCTGAGACTTGTTAAAGGTTGTTTATAATCTCTGCAGCTATGTATAGTCTCTATAACTTATACAAGCTCTTCTATAGAGTCCAGTAAACTGGTATGACTGTTCTCGATCAATTTATAGTGCAATTACAGATTATCTTGTGTATGTTAAAACACaactaatttttatatataaaaataaatgaaaatgg

Function

symbol description
ccl44 Predicted to enable CCR chemokine receptor binding activity and chemokine activity. Predicted to be involved in several processes, including cellular response to cytokine stimulus; leukocyte chemotaxis; and positive regulation of ERK1 and ERK2 cascade. Predicted to act upstream of or within immune response. Predicted to be located in extracellular region. Predicted to be active in extracellular space.

NR:

description
PREDICTED: C-C motif chemokine 17-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU120832 False 1880 lncRNA 0.39 3 13366567 13368885
XM_043252566.1 True 2279 mRNA 0.42 4 13366964 13369997
XM_043252567.1 False 1990 mRNA 0.44 5 13366569 13369997
XM_043252568.1 False 1009 mRNA 0.45 5 13366569 13369063

Neighbor

gene id symbol gene type direction distance location
babam1 babam1,LOC107747315,LOC107680561,LOC107685168 coding downstream 50929 13310322 ~ 13315638 (-)
plvapb plvap,LOC107680480,LOC107747760,LOC107597160,LOC107685179,LOC107757946 coding downstream 59425 13302345 ~ 13307142 (-)
ano8b ano8,ano8b,LOC107685197,LOC107680545,LOC107597162,LOC107747324 coding downstream 78651 13266834 ~ 13287916 (-)
dda1 dda1,LOC107685208,LOC105913185 coding downstream 101634 13261384 ~ 13264933 (-)
abhd8b abhd8b,abhd8,LOC107747334,LOC107578087,LOC107680465 coding downstream 105325 13256637 ~ 13261242 (-)
nrtn nrtn,LOC107597152,LOC107680454,LOC107747182,LOC107685306,LOC107757927 coding upstream 56257 13426254 ~ 13442667 (-)
ndufa11 ndufa11,LOC107747164,LOC107680555,LOC107685299,LOC107553555,LOC107757926,LOC107597150 coding upstream 87197 13457194 ~ 13459276 (-)
LOC122353919 gadd45ba,gadd45b,LOC107680558,LOC107553537,LOC107757925,LOC107597151 coding upstream 158935 13528932 ~ 13530398 (-)
LOC122353917 gadd45ba,gadd45b,LOC107680558,LOC107553537,LOC107757925,LOC107597151 coding upstream 227392 13597389 ~ 13598903 (-)
lsm4 lsm4,LOC107680485,LOC107597191,LOC107553538 coding upstream 489908 13859905 ~ 13862212 (-)
G81624 NA non-coding downstream 36560 13329404 ~ 13330007 (-)
G81621 ushbp1,LOC107680560,LOC107747291 non-coding downstream 41436 13323679 ~ 13325131 (-)
G81619 ushbp1,LOC107680560,LOC107747291,LOC107597197 non-coding downstream 44546 13320166 ~ 13322021 (-)
G81609 rps15,LOC107680474,LOC107685215,LOC107578086 non-coding downstream 53088 13253410 ~ 13313479 (-)
G81611 NA non-coding downstream 120294 13233801 ~ 13246273 (-)
G81643 NA non-coding upstream 19734 13389731 ~ 13390119 (-)
G81657 LOC107757942 non-coding upstream 90477 13460474 ~ 13701441 (-)
LOC122353923 NA non-coding upstream 138660 13508657 ~ 13511170 (-)
G81667 vmac,LOC107680554,LOC107685109,LOC107757942 non-coding upstream 234505 13604502 ~ 13704964 (-)
G81701 NA non-coding upstream 407620 13777617 ~ 13778410 (-)
G81512 NA other downstream 308686 12817753 ~ 13057881 (-)
vipb LOC107557425,LOC107657966,LOC107680498,LOC107713001,LOC107741995,LOC107552401 other downstream 376610 12984373 ~ 12989957 (-)
LOC122353859 NA other downstream 400934 12956861 ~ 12965633 (-)
G81523 NA other downstream 470437 12890281 ~ 12896130 (-)
hesx1 hesx1,LOC107712966,LOC107657957,LOC107557393,LOC107680467 other downstream 698979 12663831 ~ 12667588 (-)
G81663 NA other upstream 202734 13572731 ~ 13593554 (-)
G81666 vmac,LOC107757942,LOC107680554,LOC107685109 other upstream 236275 13606272 ~ 13609604 (-)
G81650 NA other upstream 328102 13698099 ~ 13699958 (-)
G81799 NA other upstream 480338 13850335 ~ 14291509 (-)
G81829 NA other upstream 515686 13885683 ~ 14305124 (-)

Expression


Co-expression Network