XLOC_006609 (si:ch211-202m22.1)


Basic Information

Item Value
gene id XLOC_006609
gene name si:ch211-202m22.1
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007124.7
NCBI id CM002897.2
chromosome length 52186027
location 24325413 ~ 24328794 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00012761
GACTCAGTTTGAAGTCGGAGACCTGATTGGAGAAGGAGCTTTTGGCCAGGTGTATGTGGCATCTCACAAACGCAGTAAAAGAGTAAAGGTTGCCCTGAAGTGCATGGTGAAGAGTCAACAGGACCGCTATCTGGACATTGATGGTCATTCCACACCTGTGCTTGCAGAAGTGGCAATGATGCTTAGGTTGATGAAAGCTCCGCGATGTCCAAACATCATCAGATTACACAACTGGCTTGAGATTGAGGACAACTTTGTTCTCATTCTGGAGTACGCAGAGTCATGCCAGACCTTGCTTCAGTACATCAAAGACACAGCGGACATTGAGGAAAACCAAGCACGCCAGTTAATGCGTCAGTTGATCCGAGCTATAATGTTCTGCTCTGAGCGTGGAGTTTTCCATGGGGATATACACACAGCGAACATCCTGGTGACTCTACCCCGATTAGAGCTCAAATTGATCGACTTTGGATGTGCTCAGCCAATTACCCAAAAGCCTTTCAATAAAAGTGACTATCGAGGAGCTGGACATGGCATGCCACCTGAGGCTTTGAGGTGTCGTGTATTCCATGCTAACCCGGCATACGTCTGGACAATAGGCATTATGCTGTATGAAATAATGCATGGACGACTGGCCTTCAATAACAGACAGTCAATAATGTTTGGCGCAATTCAGATACACCCCAGGTTATCCACAGCATGCGTGGACCTGATTTCCCAGTGTTTGATCCGTAATCCAGCTAAACGGCTACAGTTACACCAGGTAGAAGAGCACTGCTGGTTCAATCCAACGACCCCAAATCCTGTGAAGCAGTTATACAAGAGGAGaaAAAACTAAAGAAGCGAGGAGGAGGAGAGCACCATTTCCAGACATTCACAAGACTGTTAAAGTTATTAATtactccctcatgtcattccaaaccactAAGACCTCACTTTTCTTCAGTGTCAGTTCATGACGTGTGTTGAAGAGAGCTCTGtcctgcactgtatgtgtgtcgcactgctgacgtctacctcagatgtgcccacgctttgtttaaatgagaggaagtcgcgcaggcctctgggttaaACATCAGCAGTACGACACACATACAGTGAAGTACAGAACTTCTGAagtcattatttctgttttattgtttttgtgtttttctttctgcatGAAAGAAGTTTCACCTAAAAATGGCAGCTGTAGCTCCAAACCCCTGACACCTTTCTTCATCTTCAGAAAACTAGTGAAAATATTTGAGATGAACTGCGAGAACTCTCTGATCCTCCATAAACCACAAGAATGAAGAGATGTTTAAATCCCAGAAAACTTCATCAAACCATGAGAGCTCTGTCCTGCGCTGTATGTGTCGCACTGCTGATGTTTACCTCGgatgtgcccacgctttgtttaaatgagaggaagtcgcgcaggcctctgggttaaacgtcagcagtgcgacacacatacagtgcactgTGCTCTTATGAGCGTGCGAtttgagggtcagagagctctcagatttcatctaaagttttcatttgtgttctcaatatgaaataaacataaatttgaACTAAGGACATGAGGcgagtaattaatgacaataatggtAATTCATGGTGCctggactgcagctctgcacaagatgtttggccagaggagaaatggtcgtgcccaactgagtctggtttctctcgaggttttttccttcactttagtcaattggtgaagttttgttcctcgccactgtcgccgatggcttgcttggtttgggacttgtggagctgcgcatcgatggatttgctctttagtgtttggactttcagcagtgacaattaaaccacactgaactgaactgaactgaactgaactgaacttcaactctgaaaactggactgacacagtttcaatttacttctatgttaagctgctttgacacgatccacattgtaaaagcgctgtagaaatgaagataaattgaactgaattaatgCTAAAACTCCATTAGGAAGTCCAGTGCTGTCACAGTTTTCTCCTCTAAAGTGTCATCAAAGATCTGCTCAACTATTTTCTACCTCATCAATGAATCTGGTGTTCTGTCATAAGGGAAAGGGATTGTTTTATAATTAAGTGTTCATAATTGTTTTGTTATGATTTGcttttatatattgttaataattcaaataaaatcatGTGAATCAAAATGAAGCTCTGATAATCA

Function

symbol description
si:ch211-202m22.1 Predicted to enable protein serine/threonine kinase activity. Predicted to be involved in negative regulation of apoptotic process; protein autophosphorylation; and regulation of mitotic cell cycle. Predicted to act upstream of or within protein phosphorylation. Predicted to be active in cytoplasm.

GO:

id name namespace
GO:0043066 negative regulation of apoptotic process biological_process
GO:0006468 protein phosphorylation biological_process
GO:0007346 regulation of mitotic cell cycle biological_process
GO:0046777 protein autophosphorylation biological_process
GO:0005737 cytoplasm cellular_component
GO:0005524 ATP binding molecular_function
GO:0000166 nucleotide binding molecular_function
GO:0004672 protein kinase activity molecular_function
GO:0004674 protein serine/threonine kinase activity molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-060531-31 Predicted to enable protein serine/threonine kinase activity. Predicted to be involved in negative regulation of apoptotic process; protein autophosphorylation; and regulation of mitotic cell cycle. Predicted to act upstream of or within protein phosphorylation. Predicted to be active in cytoplasm.

Ensembl:

ensembl_id ENSDARG00000094491

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00012761 True 2216 mRNA 0.43 6 24325413 24328794

Neighbor

gene id symbol gene type direction distance location
XLOC_006608 rab4a coding downstream 13785 24295896 ~ 24311628 (-)
XLOC_006607 CR762497.1 coding downstream 39023 24283670 ~ 24286390 (-)
XLOC_006606 urb2 coding downstream 61731 24231327 ~ 24263682 (-)
XLOC_006604 galnt2 coding downstream 106618 24068577 ~ 24218795 (-)
XLOC_006605 CR762497.2 coding downstream 198234 24127063 ~ 24127179 (-)
XLOC_006610 si:ch211-202m22.1 coding upstream 977 24329771 ~ 24332495 (-)
XLOC_006611 NA coding upstream 18195 24346989 ~ 24351543 (-)
XLOC_006612 rhoua coding upstream 43021 24371815 ~ 24379271 (-)
XLOC_006613 tbp coding upstream 52550 24381344 ~ 24396199 (-)
XLOC_006614 cep68 coding upstream 92721 24421515 ~ 24429095 (-)
XLOC_006471 BX537274.2 misc downstream 14060508 10264741 ~ 10264905 (-)
XLOC_006338 rn7sk misc downstream 23499188 825904 ~ 826225 (-)
XLOC_006602 AL772289.1 non-coding downstream 364007 23961292 ~ 23961406 (-)
XLOC_006597 NA non-coding downstream 913782 23408029 ~ 23411631 (-)
XLOC_006595 NA non-coding downstream 1107595 23212759 ~ 23217818 (-)
XLOC_006616 NA non-coding upstream 244292 24573086 ~ 24574746 (-)
XLOC_006617 NA non-coding upstream 248471 24577265 ~ 24578022 (-)
XLOC_006618 AL831745.1 non-coding upstream 256430 24585224 ~ 24588220 (-)
XLOC_006619 NA non-coding upstream 261626 24590420 ~ 24623225 (-)

Expression


Co-expression Network