CI01000000_15964514_15964804


Basic Information

Item Value
gene id CI01000000_15964514_15964804
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000000
NCBI id null
chromosome length 19091038
location 15964327 ~ 15964961 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000000_15964514_15964804.mRNA
GAATAAAAACAAATCTTTGTACCATTTGAAAATGAGCATTCAGTGTCCAAACACATGGGAATATTGCAGAGTTGCACATCATGATAAGCTGTAACAGAGAGCATACACAAGGAATGACAATACAGTCATATATCTTATACTATTTTTAGAAGCCTCCATTCATTGAGCTGTTGAAAATGTGGTCAACATGAGGGAACTAGCAACAGTCGGGAAAACAGAGACTCCAACAGGGTGGGCCTGGGAGAAAAACCACGTGAGTGGGGCAAAACTTGTTCGGCAGGGATGGCATAACTTTGGGAGTGAGACCGAGAGAATGCTTTATATAAACATTTCTGACTGCGCGTCCTATAGAGTGACAACATTTGAGAACAGTGGCCTACGAGGAATCTCAAGGCTACGAGTGGCATACGGCCAAACCCAGAAACAGAGAGCCGCTACATTTCATGACCTCAAGGCGGAGCCTGATGGGTGGGTGTGATGATTGGATAAACTCTCATCACAGGGTGTACAAATCCACAAAGGATTCACACTGTTCTTTCTCAAGGACATCTCAATAGGAGGTACGTACGGTGCCGCTTTCTATTTGTGGCAGAAATGAATCAATCATAATCACTCCACCGCAATTATAAAACACA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000000_15964514_15964804.mRNA True 635 mRNA 0.43 1 15964327 15964961

Neighbor

gene id symbol gene type direction distance location
CI01000000_15893372_15894283 NEUROG1 coding upstream 69434 15891679 ~ 15894893 (+)
CI01000000_15684820_15696865 NA coding upstream 267212 15684495 ~ 15697115 (+)
CI01000000_15620007_15622711 PCDH11X coding upstream 341485 15620007 ~ 15622842 (+)
CI01000000_15519933_15528742 PCDH11X, PCDH11 coding upstream 435432 15519933 ~ 15528895 (+)
CI01000000_15158265_15165627 NA coding upstream 798055 15157022 ~ 15166585 (+)
CI01000000_16011590_16014992 NA coding downstream 46629 16011590 ~ 16015151 (+)
CI01000000_16034357_16056363 SMAD5 coding downstream 68937 16033898 ~ 16056594 (+)
CI01000000_16066787_16081915 LMAN2 coding downstream 101348 16066309 ~ 16082483 (+)
CI01000000_16087757_16091758 TMED9 coding downstream 122472 16087433 ~ 16092035 (+)
CI01000000_16096527_16100582 B4GALT7 coding downstream 131566 16096527 ~ 16101229 (+)
G10209 NA non-coding upstream 9878 15953799 ~ 15954449 (+)
G10185 NA non-coding upstream 30951 15932984 ~ 15933376 (+)
G10203 NA non-coding upstream 32860 15931260 ~ 15931467 (+)
G10200 NA non-coding upstream 34363 15929668 ~ 15929964 (+)
G10052 NA non-coding upstream 82805 15872401 ~ 15881522 (+)
G10240 NA non-coding downstream 35891 16000852 ~ 16001649 (+)
G10255 NA non-coding downstream 48880 16013841 ~ 16014082 (+)
G10293 NA non-coding downstream 220934 16185895 ~ 16186172 (+)
G10294 NA non-coding downstream 221309 16186270 ~ 16186508 (+)
G10305 NA non-coding downstream 238126 16203087 ~ 16203431 (+)
G10201 NA other upstream 33765 15930266 ~ 15930562 (+)
G9201 NA other upstream 1729386 14215024 ~ 14234941 (+)
G7522 NA other upstream 3785319 12178369 ~ 12179008 (+)
G7514 NA other upstream 3827319 12136522 ~ 12137008 (+)
G7153 NA other upstream 4718694 11244457 ~ 11245633 (+)
CI01000000_17339270_17345013 CXCL14, CXL14 other downstream 1374193 17339154 ~ 17346200 (+)
G11465 NA other downstream 1918992 17883953 ~ 17887462 (+)
G11521 NA other downstream 2067778 18032739 ~ 18164112 (+)
G11801 NA other downstream 2715906 18674116 ~ 18745376 (+)

Expression


Co-expression Network