CI01000000_16011590_16014992


Basic Information

Item Value
gene id CI01000000_16011590_16014992
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000000
NCBI id null
chromosome length 19091038
location 16011590 ~ 16015151 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000000_16011590_16014992.mRNA
CCAAGACCCTCCTGGAGCTTGCAGAGGGATCAGTTGTTTCTACAGCCTCAAAGCTTTTTAAAGACGCTGGTCTTGCCGATCATCTCACTGGTTCTGAGGCTGTGACCTTAATAGCCCCACTGAATGATGCTTTTAAAGACAAGAGCTTGGCCATGACACCCGACATGAAGAAACTGCTGAGAAACCACATTCTCAAAGAGAGGTTTTCCTCCAAGAGCCTTTACCATGGACAAGAGTTGGAGACTCTTGGTGGAATGAAACTTAGAGTGTTTGTGTTCAGAGATAACCTGTGCATTGAGAATGCCTGCATTGCTGCCCATGACAAAAATGGCCGCTTCGCGAATATGTTCATCGTTGATAAGTTCCTGACACCCCCCATGGGAACTGTCATGGACGTCCTGAAGGCAGATGATCGTTTTAGCCTATACTTACATCTGTTGTTGTACGTAGGAGACCCCAAGGAGCTGGCAAGCCTTCTGAAATACCACATTGGTGATGAGTTCCTGGTCAGCGGCGCTGTGACCTCACATACCAGAATGAAGCCCCTTGAAGGCGATAAACTGGAGTTAGGCACTCGTAACTCCACCATATACGTGAACAGAGTGCCTGTTGTCGAGGGTGATCTGATGGCTACCAATGGAGTTGTACATGCTGTTGACGTAATCGTAAAGCCACTGCGTAAGCCATCGGTCAAATTTTCTTAAACATTTTGATAATATAAATATCTTATTTCAGAGCTTCATAACAGTGTGATGTGCCACTGTGTTTTAGCTCCTAAGACTGTGAGTGACCAGGCTGAAGGCTCAACAATCAGACGCACCTCTGCTGTTAGGGTTAGTATATGTCATAAACTATTTTTCCCA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000000_16011590_16014992.mRNA True 863 mRNA 0.46 5 16011590 16015151

Neighbor

gene id symbol gene type direction distance location
CI01000000_15964514_15964804 NA coding upstream 46629 15964327 ~ 15964961 (+)
CI01000000_15893372_15894283 NEUROG1 coding upstream 116697 15891679 ~ 15894893 (+)
CI01000000_15684820_15696865 NA coding upstream 314475 15684495 ~ 15697115 (+)
CI01000000_15620007_15622711 PCDH11X coding upstream 388748 15620007 ~ 15622842 (+)
CI01000000_15519933_15528742 PCDH11X, PCDH11 coding upstream 482695 15519933 ~ 15528895 (+)
CI01000000_16034357_16056363 SMAD5 coding downstream 18747 16033898 ~ 16056594 (+)
CI01000000_16066787_16081915 LMAN2 coding downstream 51158 16066309 ~ 16082483 (+)
CI01000000_16087757_16091758 TMED9 coding downstream 72282 16087433 ~ 16092035 (+)
CI01000000_16096527_16100582 B4GALT7 coding downstream 81376 16096527 ~ 16101229 (+)
CI01000000_16106717_16114328 EMX1.2, EMX3, EMX1 coding downstream 91447 16106598 ~ 16114355 (+)
G10240 NA non-coding upstream 9941 16000852 ~ 16001649 (+)
G10209 NA non-coding upstream 57141 15953799 ~ 15954449 (+)
G10185 NA non-coding upstream 78214 15932984 ~ 15933376 (+)
G10203 NA non-coding upstream 80123 15931260 ~ 15931467 (+)
G10200 NA non-coding upstream 81626 15929668 ~ 15929964 (+)
G10293 NA non-coding downstream 170744 16185895 ~ 16186172 (+)
G10294 NA non-coding downstream 171119 16186270 ~ 16186508 (+)
G10305 NA non-coding downstream 187936 16203087 ~ 16203431 (+)
G10308 NA non-coding downstream 192108 16207259 ~ 16207561 (+)
G10316 NA non-coding downstream 204015 16219166 ~ 16219378 (+)
G10201 NA other upstream 81028 15930266 ~ 15930562 (+)
G9201 NA other upstream 1776649 14215024 ~ 14234941 (+)
G7522 NA other upstream 3832582 12178369 ~ 12179008 (+)
G7514 NA other upstream 3874582 12136522 ~ 12137008 (+)
G7153 NA other upstream 4765957 11244457 ~ 11245633 (+)
CI01000000_17339270_17345013 CXCL14, CXL14 other downstream 1324003 17339154 ~ 17346200 (+)
G11465 NA other downstream 1868802 17883953 ~ 17887462 (+)
G11521 NA other downstream 2017588 18032739 ~ 18164112 (+)
G11801 NA other downstream 2665716 18674116 ~ 18745376 (+)

Expression


Co-expression Network