G81990 (LOC107656085,LOC107753812,LOC107593131,LOC107736622)


Basic Information

Item Value
gene id G81990
gene name LOC107656085,LOC107753812,LOC107593131,LOC107736622
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056709.1
NCBI id CM032078.1
chromosome length 24513629
location 14860142 ~ 14863210 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU121373
TCTTCCAGCTTTAGTTTGACCCGTCTTTCTTCAAAGTCCTTTAGTAGTGTCTCAGTCAGACCTTTCTGGGAAGAAGGCGACGACAGGTCAGCAAGTGCACTCAAGGGTTTGATGGGGGTTGTTCTTGAAACAGTCGGGGACGCGGCTTTCGGGCTGCCCCATGGCTGCGGTGTCATAATTGACACTGAGGGAAGTCTAAAAGTGGGTCGTGGTGAGGACAACTGTGAACTTTACCTGTTACAGATAAGTGAGAAGTGTCCAGACTTCCGAAATAAGGATTACTGtaattagttttcttttctaGAAATGCAGAATCCACTTCTGCCATGTTAGCATGAAGAGTTTGTGGTGAAAATGCAGTCTCTTCGCTGGTTAATGGAGACCTAGGTTCAGAGGAATTCACAGATGCTGGGTTAGGTGCTGAGAAAGACTGACTACTGGACTCTCTCAGCTCTTGGAGCTCTTGTTCTCGTCTGAGGTCTTCTTCAATTTCCTGACGAATGCTGTTTGGGGCATTCTGCATTTTAGGGCTCCAGTCGGTGTACTCAAGGTGAGATTTCCAGGTAGGAGTGTACCGACTGGTTTTTGGGGGTTCCAGTGGGGACGGAGGATTTTGAGAGTAAATTCTGGTCCTTCCTGACATGCTTGTGCCATTTTCCACAATCCAGGATGGCTCTTTATTTGTTCTAAGGGTACTGGTTTGGCACTCTACCCCATTTTCTTTACGAACGATTACTTTAGGATGGTCCTCAGGATGTGCACTTACTTGGACTTGGTTTCCAAAAGTGCTGCTATCAGAGTTTTTCTGAAGAATAGATTCATCAGGATGTCGGTGAGGACAGCAAGGCGAAAGAACTTCCTGTGAGTCCAAAAGGTTACCTTCCTCTACAAGTGCAAGTTTCTCTGTAATCCATGTGCCATCTGCAGACACTGTGCTTTGCTCTAAATCATTTGTGGGACTTTCTCTTAGACTTGACCCCAACGATGTGACTGGAATTTCATCCGTTTGTGACTCAAATGACTTCTCACTGTCCTGTACTTGGTTCTCTTGGGTATCATGGCTTGAAACACTGTTTGTGATCTGCCGCTGTTTCTCAAGTTCACGCTCTCTCTGAATAAGGAAACTTACTCTGTTGGGTTctttaggttttgaagcttTCACCTGTGGAGATGATAGGGACAGAATTGGCTTTATCCTGATCTCCACCATTTCTGAATTGTCTTTGTGCAAGATACCCCTTGATCGACGTAGACTCTCTTCCCGCTGTTGGGAAATTCTGATTTCCCTTTGAATTGGAGTTTCCTTTGCACTCAACATTGTCAAGCTGCTTCCCATCTCTGAAATGGAAGGATCGTTCGAAATGGTCCCATTGTTGGGGTATCCTCCGCTTTGGTCACCAAGACCAGAGTCAACATCATCTAAAGCACCTCCATTTTTTGAATCCTCAGTCACAGTTTCAGTCTGTACTTCTGTTTCTTGTTGGGTTGCTTGTGGGATCTCATTCTCATCTAGGCTGTTGTCTTTGAATTCTTGTCTTAGAGTGAAGATGCTGGCCGTCGAGGACAGAGTTCTTCCCCGCAGTTTGGGGGAATAAGGCAGCCGCTCGGGACTCTGTAGGAAGGGGTTCTGTTTTGATTGTTCCatcattaaaaactgttttcgTGCTGCGTTGAAGTCAATTTGCTCATTGTCTATGGTGCCAGGTTCAACCCTGGCTTCTTCAGTCTTCTCTCTCACTGGTTTGTAGCTTAGACTAAACCCATGCAGGAGTCTTTGCGGCGTGTTACTGAGGTCAAGATTTTCTAAGGCACTCCACTGTTCTTTAAGGGCAGGGCTCTTCTTGGGTGCCTGATTCCGGATGATCTCAGTTCGGTCTGGGTTTTCCTCATGTTCGTTCAAAGTGTAAGCATCTTCTATTCGGTAACGGTCATCTCCATTGGTTTCTTCGAAAAGCCTTCCAGGTATCTTTTCCTCTGTGTACGTTTGTAGCTTAAATATGCTCTTCTCCTTCAGGGTATTCAGTTTGGCCTGCCTTTGTGGAGAAACCATGTAGACCTCATTCATCTCAGCTTCTGGACTTGCTGGGTCATCTACAAAGGAATAGAAGCCAACATGTGAGCCTGAGCTGCTGGCGGTTGCAGGGCTGCTTGGGTAGCTTGGAGTACTGGGCCTAAAGTCTTCACTCTCACTTCCATCCTCAGACACAGCCACTTGCTTAGCCTGGACCACCACATCTGGAGGACTGTTGCCATACCCAGAGGACACTATCACAGTGGGCTGCATGTCTGTCACTGTTATGCTTTCCAAGCTGAACCTGAAAGAGTTACCATCCTGACTGCTACTCCACGTGTTCTCTAGCGATTGGGGTTGGCCTGTAGGGCTCAATATGGAGCGCAAATCCGACTGCTCTAGCTTAGGGGAGAAGGGCTTCATCACCCAACGTTTTGGGTTGCTGGTCATGGGCACTTTGGATGGTGGATGGTTCTGGGCAGCCCTGGGAAGTGGAGGTCTCAGAGAATAATGGGAATGGATCACAGCCTGCTCCTCTGTTAAGGAGTGAGTGCATGCATCATATGGGTTGACCGTCACAGTAGATGCCTGTCTCT

Function

NR:

description
PREDICTED: mitotic interactor and substrate of PLK1-like isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU121373 True 2607 lncRNA 0.47 2 14860142 14863210

Neighbor

gene id symbol gene type direction distance location
tmem259 LOC107753818,LOC107656092,LOC107593127,LOC107723848,LOC107602804 coding downstream 62047 14789168 ~ 14798095 (-)
sid1 NA coding downstream 205622 14653436 ~ 14654520 (-)
si:ch211-1a19.2 NA coding downstream 207020 14651265 ~ 14653122 (-)
mast3b LOC107753827,LOC107723058,LOC107656100,LOC107692230,LOC107572946 coding downstream 270972 14559901 ~ 14589170 (-)
elovl1b elovl1b,LOC107665848,LOC107656106,LOC107753833,LOC107562086,LOC107602768 coding downstream 348520 14488377 ~ 14511622 (-)
slc1a8a slc1a8a,LOC107753804,LOC107674556,LOC108437258,LOC105896421,LOC108271187 coding upstream 252562 15115772 ~ 15126504 (-)
LOC122353710 slc39a3 coding upstream 263432 15126642 ~ 15131592 (-)
sgta LOC107656077,LOC107753803,LOC107674559,LOC107723856 coding upstream 269115 15132325 ~ 15138312 (-)
LOC122354454 LOC107753801,LOC107655989,LOC107602816,LOC107674553,LOC107723865,LOC107593156,LOC107563700 coding upstream 309531 15172741 ~ 15175386 (-)
LOC122353766 NA coding upstream 334592 15197802 ~ 15200640 (-)
LOC122354194 NA non-coding downstream 50173 14807103 ~ 14809969 (-)
G81954 NA non-coding downstream 61116 14798726 ~ 14799026 (-)
G81920 NA non-coding downstream 198862 14659709 ~ 14661280 (-)
LOC122353646 NA non-coding downstream 216601 14637124 ~ 14643541 (-)
G81889 LOC101064630,LOC107674755 non-coding downstream 314439 14545107 ~ 14545703 (-)
G81996 NA non-coding upstream 26318 14889528 ~ 14891468 (-)
LOC122354533 NA non-coding upstream 31154 14894364 ~ 14907495 (-)
G82009 NA non-coding upstream 195994 15059204 ~ 15059536 (-)
G82044 LOC107674560 non-coding upstream 242704 15105914 ~ 15106884 (-)
G82037 LOC107723845,LOC107602813,LOC107674545 non-coding upstream 247791 15111001 ~ 15112738 (-)
G81866 NA other downstream 323750 14534718 ~ 14536392 (-)
chrna4b chrna4b,LOC107753893,LOC107562063,LOC107655994,LOC107665840,LOC107602782,LOC107723056 other downstream 408402 14442601 ~ 14451740 (-)
G81829 NA other downstream 555018 13885683 ~ 14305124 (-)
G81799 NA other downstream 568633 13850335 ~ 14291509 (-)
G81650 NA other downstream 1160184 13698099 ~ 13699958 (-)
G82067 NA other upstream 341751 15204961 ~ 15214058 (-)
LOC122354561 NA other upstream 370723 15233933 ~ 15235436 (-)
LOC122354564 NA other upstream 537708 15400918 ~ 15401691 (-)
pla2r1 pla2r1,LOC107674555,LOC107564855,LOC107747570 other upstream 689146 15552356 ~ 15577065 (-)
LOC122354045 NA other upstream 732355 15595565 ~ 15614937 (-)

Expression


Co-expression Network