LOC122354561


Basic Information

Item Value
gene id LOC122354561
gene name NA
gene type misc
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056709.1
NCBI id CM032078.1
chromosome length 24513629
location 15233933 ~ 15235436 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU121487
GAAAATCAGGCCCAAAAGCTGCAAGCCATCCAACATgcaaaggaagaggaagaaaaaatcGAAAAGCTAGAAAAGAGCATTGAAGAACTGACGAAACGGTATGAAGGCCTGCTCGAAGAAAGACAAGAACAGCACCGGCGTAGACGGCAGGCCAAACTAAACCGGGAGAGCAGTGCAAAGATGCCTGGAAAGtTTGAGGACGCCGATCGACGCCGTGAATGCCGTAGAGCAGAGTACCTGAGAGACGAAAACCTACGACTTAAAGCTGAACTAAAAGAGATCGATCGCTCAAATCTGGAACTGCAGAAGGACATAAAGGAGGAGAAGACTCGTATCCTGCACCTCTCCGAAGAGCTGAGGCAGAAGAAGACAGAGCTGGAAGACATCacagcagaaacagaa
>XM_043252799.1
CGGAGGAAAGAGACGAGCTCGATGCTTCTCGCGGAGGACATCGAGGAGAACAGGAGAGCGACCATAGCCCTGGAAGAGCAGGAAAAGGAGTTGCAGGGGAAGCGGGAGCGTTTGCGAGAAAGAGCCGAAAAGGTGGCAAAAGAAAAGGAGGAACTGAGGCAGTTAAAACGGGATACTGCTAAGGAGCTGCAAGAAAATCAGGCCCAAAAGCTGCAAGCCATCCAACATgcaaaggaagaggaagaaaaaatcGAAAAGCTAGAAAAGAGCATTGAAGAACTGACGAAACGGTATGAAGGCCTGCTCGAAGAAAGACAAGAACAGCACCGGCGTAGACGGCAGGCCAAACTAAACCGGGAGAGCAGTGCAAAGATGCCTGGAAAGtTTGAGGACGCCGATCGACGCCGTGAATGCCGTAGAGCAGAGTACCTGAGAGACGAAAACCTACGACTTAAAGCTGAACTAAAAGAGATCGATCGCTCAAATCTGGAACTGCAGAAGGACATAAAGGAGGAGAAGACTCGTATCCTGCACCTCTCCGAAGAGCTGAGGCAGAAGAAGACAGAGCTGGAAGACATCacagcagaaacagaaagattgAAACTGAAACTAGAGGAAGAGCTCACCACTGAACATGAAGACGAGGTCCTGAACGCTCAGATAAAGGCCGGGATTCGTTCGATGTATCAAATGATCGCACCTTACTGGAAAGAGTCTGAAGCTGTTGAGGACCCCTTCAAGCAGCTGCAGCTGTTTCAACTTATGAAAGCTtttggtgaagaacaaaaaGCAGGTGAAACTAAAGACAACAAGCAGCGGAGATCCAAGCTATGAAGATGCACCAAAACCAGCCAGATGTACCTAAACtacataataaaatcattttgacagca

Function

GO: NA

KEGG:

id description
ko03030 DNA replication
ko04110 Cell cycle
ko04111 Cell cycle - yeast
ko04113 Meiosis - yeast

RNA

RNA id representative length rna type GC content exon number start site end site
TU121487 False 402 TUCP 0.49 2 15234488 15235056
XM_043252799.1 True 893 mRNA 0.48 6 15233933 15235436

Neighbor

gene id symbol gene type direction distance location
LOC122353768 NA coding downstream 19688 15209438 ~ 15214245 (-)
LOC122353767 NA coding downstream 28199 15204939 ~ 15205734 (-)
LOC122353766 NA coding downstream 33293 15197802 ~ 15200640 (-)
LOC122354454 LOC107753801,LOC107655989,LOC107602816,LOC107674553,LOC107723865,LOC107593156,LOC107563700 coding downstream 58547 15172741 ~ 15175386 (-)
sgta LOC107656077,LOC107753803,LOC107674559,LOC107723856 coding downstream 95621 15132325 ~ 15138312 (-)
LOC122353770 NA coding upstream 7052 15242488 ~ 15245700 (-)
gpr179 LOC107753843,LOC107718864,LOC107680456,LOC107562070,LOC107563489,LOC106564745 coding upstream 32539 15267975 ~ 15282844 (-)
jupa jupa,LOC107562072,LOC107753847,LOC107680531,LOC108438667,LOC106564751 coding upstream 114302 15349738 ~ 15371682 (-)
krt98 LOC107562078,LOC107680525,LOC107753857,LOC107563686,LOC107718877,LOC107674549 coding upstream 187716 15423152 ~ 15430070 (-)
hyls1 si:dkey-23f9.4,LOC107680541,LOC107597141,LOC107674570,LOC107563627,LOC107718881,LOC107753882 coding upstream 232534 15467970 ~ 15474238 (-)
LOC122354566 NA non-coding downstream 25099 15208320 ~ 15208834 (-)
G82053 NA non-coding downstream 68328 15165405 ~ 15165605 (-)
G82037 LOC107723845,LOC107602813,LOC107674545 non-coding downstream 121195 15111001 ~ 15112738 (-)
G82044 LOC107674560 non-coding downstream 127049 15105914 ~ 15106884 (-)
G82009 NA non-coding downstream 174397 15059204 ~ 15059536 (-)
G82173 NA non-coding upstream 54212 15289648 ~ 15291976 (-)
G82176 NA non-coding upstream 62480 15297916 ~ 15298875 (-)
G82178 sp2,LOC107753850,LOC107680542,LOC107718867,LOC107674551 non-coding upstream 64990 15300426 ~ 15301171 (-)
G82177 sp2,LOC107718867,LOC107680542,LOC107674551,LOC107753850 non-coding upstream 66631 15302067 ~ 15302341 (-)
G82162 NA non-coding upstream 68209 15303645 ~ 15305613 (-)
G82067 NA other downstream 19875 15204961 ~ 15214058 (-)
G81866 NA other downstream 697541 14534718 ~ 14536392 (-)
chrna4b chrna4b,LOC107753893,LOC107562063,LOC107655994,LOC107665840,LOC107602782,LOC107723056 other downstream 782193 14442601 ~ 14451740 (-)
G81829 NA other downstream 928809 13885683 ~ 14305124 (-)
G81799 NA other downstream 942424 13850335 ~ 14291509 (-)
LOC122354564 NA other upstream 165482 15400918 ~ 15401691 (-)
pla2r1 pla2r1,LOC107674555,LOC107564855,LOC107747570 other upstream 316920 15552356 ~ 15577065 (-)
LOC122354045 NA other upstream 360129 15595565 ~ 15614937 (-)
LOC122353775 srsf1,srsf1a,LOC107704814,LOC102236359,LOC103148541,LOC106947524,LOC106593141,LOC107661108,LOC107731957,LOC108431323,LOC107554282,LOC107727915,LOC108278759 other upstream 1355370 16590806 ~ 16593930 (-)
LOC122353776 NA other upstream 1368568 16604004 ~ 16606580 (-)

Expression


Co-expression Network