G82189


Basic Information

Item Value
gene id G82189
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056709.1
NCBI id CM032078.1
chromosome length 24513629
location 15335006 ~ 15335823 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU121692
ttttttttttttttggtcacataAAGGGAGTTAGAAACATTAATTCAAGGAAGTAACAAAGAGGATAAATTGCGGCAGTGAGGCAAAACGCATGCTACCCGTTCTTTGCTTTATACTGACCTGGCTAAAGGTGGGGGGTGGTGGAGGTCCAGGCGGAGGGGGAGGTGGAGGAATAGGCATCTTGGAAAATACTGAAGACGTCGACAGTCACCTCAATCTTCAGCGCTCGGTCTGAGGTTCTCACAAAAACTCTGCAAGGTGGGAAAACTACAGCCATCAGACTTCCATGAGCAGAAAAATCAAGAGATGGCTGTAACTAAAACAATCCAAAAACAGTGACGAATCCCAGTGACAAATTAGTGATTAACGTCACAAATATGGCGGCACGGTACCTCCCAAACTCTTCCAGGAACTACACAACAGCAGATAGCAGGCTCCACATACTAActacatttcaaaaaaatactCAAACGAAAAACCTGCATTcctcttggttttttttttttttgacaggttAAACTTCCTGTAAGCACTCCAAAAATTTCCCCACCAGTTCAGGCAGTGCTCGCTCACATGTGCAGTGATACTAAACTTCAGCAGGACTAACTGGAATGTCACTAAGCAGGATCTGCCGCTGATGGAATTGAGAGAGCGTTAAAATGGGTGAAGCACTGCAAAACGCGTATAACACCTGTGTGCTTGTGACCCGAATGGCTCATCTTTAGTACATTCAAGCTATTATATGCTGTAATCGAAACGCCCAATGCTGCTCCATTTAATCATGGCTTTATTTATGAACATATCTAAGGCACTACACA

Function

GO: NA

KEGG:

id description
ko00533 Glycosaminoglycan biosynthesis - keratan sulfate

RNA

RNA id representative length rna type GC content exon number start site end site
TU121692 True 818 lncRNA 0.43 1 15335006 15335823

Neighbor

gene id symbol gene type direction distance location
gpr179 LOC107753843,LOC107718864,LOC107680456,LOC107562070,LOC107563489,LOC106564745 coding downstream 52162 15267975 ~ 15282844 (-)
LOC122353770 NA coding downstream 89306 15242488 ~ 15245700 (-)
LOC122353768 NA coding downstream 120761 15209438 ~ 15214245 (-)
LOC122353767 NA coding downstream 129272 15204939 ~ 15205734 (-)
LOC122353766 NA coding downstream 134366 15197802 ~ 15200640 (-)
jupa jupa,LOC107562072,LOC107753847,LOC107680531,LOC108438667,LOC106564751 coding upstream 13915 15349738 ~ 15371682 (-)
krt98 LOC107562078,LOC107680525,LOC107753857,LOC107563686,LOC107718877,LOC107674549 coding upstream 87329 15423152 ~ 15430070 (-)
hyls1 si:dkey-23f9.4,LOC107680541,LOC107597141,LOC107674570,LOC107563627,LOC107718881,LOC107753882 coding upstream 132147 15467970 ~ 15474238 (-)
ptp4a1 ptp4a1,LOC107563655,LOC107597142 coding upstream 153797 15489620 ~ 15493617 (-)
myom2a LOC107674554,LOC107680534,LOC107597144,LOC107753884,LOC107718897 coding upstream 163291 15499114 ~ 15521716 (-)
G82187 NA non-coding downstream 2937 15331657 ~ 15332069 (-)
LOC122354567 abcc10,LOC107680503,LOC107753844,LOC107718869,LOC107674523 non-coding downstream 14875 15317492 ~ 15320131 (-)
G82181 NA non-coding downstream 20526 15313945 ~ 15314480 (-)
G82162 NA non-coding downstream 29393 15303645 ~ 15305613 (-)
G82177 sp2,LOC107718867,LOC107680542,LOC107674551,LOC107753850 non-coding downstream 32665 15302067 ~ 15302341 (-)
G82190 LOC107562076,LOC107753881,LOC107680504,LOC107718872,LOC107674524,LOC107563570 non-coding upstream 2104 15337927 ~ 15342418 (-)
G82160 krt94,LOC107753855,LOC107680518,LOC107562075,LOC107674540,LOC107718880,LOC107563560 non-coding upstream 84982 15420805 ~ 15446837 (-)
G82211 NA non-coding upstream 108699 15444522 ~ 15450399 (-)
G82216 NA non-coding upstream 135483 15471306 ~ 15471689 (-)
G82214 NA non-coding upstream 161827 15497650 ~ 15498104 (-)
LOC122354561 NA other downstream 99570 15233933 ~ 15235436 (-)
G82067 NA other downstream 120948 15204961 ~ 15214058 (-)
G81866 NA other downstream 798614 14534718 ~ 14536392 (-)
chrna4b chrna4b,LOC107753893,LOC107562063,LOC107655994,LOC107665840,LOC107602782,LOC107723056 other downstream 883266 14442601 ~ 14451740 (-)
G81829 NA other downstream 1029882 13885683 ~ 14305124 (-)
LOC122354564 NA other upstream 65095 15400918 ~ 15401691 (-)
pla2r1 pla2r1,LOC107674555,LOC107564855,LOC107747570 other upstream 216533 15552356 ~ 15577065 (-)
LOC122354045 NA other upstream 259742 15595565 ~ 15614937 (-)
LOC122353775 srsf1,srsf1a,LOC107704814,LOC102236359,LOC103148541,LOC106947524,LOC106593141,LOC107661108,LOC107731957,LOC108431323,LOC107554282,LOC107727915,LOC108278759 other upstream 1254983 16590806 ~ 16593930 (-)
LOC122353776 NA other upstream 1268181 16604004 ~ 16606580 (-)

Expression


Co-expression Network