CI01000000_16085128_16085979


Basic Information

Item Value
gene id CI01000000_16085128_16085979
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000000
NCBI id null
chromosome length 19091038
location 16084573 ~ 16086060 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000000_16085128_16085979.mRNA
ATTGGCCTGGTCTGACTCATCTACAAGCAGTTGTGCTTTGTACTGGTTTTTGAGAACAATCTTCTTTGAAGGACAATCGAAATGGCAGGATCCTACGATTGGTTTTCAGCTGAGGATGACGTTCAACCAAGAGACCAAGGGTCATCATTGCTTGTGAATAATTTGCATCAAGATGTGACCGAACGACTGTTGCATACCGTATTCCACCCATTCGGACACATCCTTTCTGTGTACGTGTGCAGAAATACAGTGACCGGGCGGTCTCGTGGATATGGTTTTGTGACCTTTAAACACCGGCATGATGCAAAAAATGCTCTAGAGGCTCTGAATTATGTGGAGCTCATGGACCTACCAATGATGTGCAGTTGGGTCCAGTACATGGATATTAAGGTCCTGGCAAGGCGCAGTGATAGGTCTGCCATATATAATACCCTCTCAAACTATGCGGAAGTCCTGGAGCCCAGAGAAAGCATCTCTGAAGCAACAAGGTCATTGCTTGTGAGTAATTTGAAATCAAATGTGAGCGAACAAGAGCTGCGTGCAATGTTCCTCCCATTTGGCCCCATCTGTACTGTGCAAGTGTGCCGAGATAGAAGAACCAACCTCTCTCGTGGGTATGGTTTTGTGACCTTTAAACATCGCTGTGATGCAGAAAATGCCATAGTGGCTCTGAATTTTTCTGAGCTCTTGGGCCAACCAGTGCACATCCACTGGGGCCAAGACAGTACTATTAAGGTCCTAGAGAGGAGCAAAGAAAGCAGCTCCCGTTATTGGCATGTTGAAGAAATAGCCCAGACTGAACCTATCGAGCAGTCATGGGGAAGAAGACTTGCAAATTCTGCGAAAGGTTTTTTCACAACAGTTTTGACCAACCCAGAAGCCTTGGTCGGCATTGGCCTCCTAGCATGCGGCTTGTTTATGAGAAGGGCCTAGTGTAGGACAAAGAATGCAGCTCCAACATGTGACTTCCTCTCATGAAAAAAGTCACGAATGAATCTTCTAGCAAGGCACCTAACCCACAATCGCTCCCCGGGTGGCACAGCAAATGGCTGCCCACTGCTCCAGGTGTGTGTCCACACTAACTTGGATGGGCAGTTGTGGCCTAATGGTTAGAGAGTCGGATTTGTAACGTGGAGTTGCAGGTTCAAGTCTCAGTACCGGCAGGAAATGTAGGTGGGGGGAGTGAATAAACAGCGCTCTCTTCCACTCACATTACCCACAACTGCCCTTGAGCAAGGCATCGAACCCCCAGTCGCCCCCGGGGTGGCACACTAACTGGGATGGGCAGTTATGTCCTAATGGTTAGAGAGTCAGACTTGTAACCCAAAAGTTGCAGATTCGAGTCTCAGTAGCAGCAGGAAATGTAGGTGGGTGAGTGAATAAACAGTGCTCTCTTCCACTCTCATTACCCACAACTGAGGTGCCCTTGAGCAAGGCACCTAACCCACAATTGCTCCCCGGGTGGTTAATTTTTTTTAACCAAATAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000000_16085128_16085979.mRNA True 1488 mRNA 0.48 1 16084573 16086060

Neighbor

gene id symbol gene type direction distance location
CI01000000_16058344_16063500 GPR137BB coding downstream 20945 16057946 ~ 16063628 (-)
CI01000000_15977372_15989083 STARD10 coding downstream 95266 15977090 ~ 15989307 (-)
CI01000000_15934482_15962471 ARAP3 coding downstream 120397 15934381 ~ 15964176 (-)
CI01000000_15906519_15916121 NA coding downstream 167845 15906196 ~ 15916728 (-)
CI01000000_15875749_15884489 EEF1G, EF-1G, EF1G coding downstream 200084 15875749 ~ 15884489 (-)
CI01000000_16167132_16171442 CCDC69 coding upstream 80992 16167052 ~ 16171442 (-)
CI01000000_16188243_16189302 NA coding upstream 102099 16188159 ~ 16189302 (-)
CI01000000_16191231_16195841 GM2A coding upstream 104801 16190861 ~ 16195841 (-)
CI01000000_16302021_16337921 SLC36A1 coding upstream 214581 16300641 ~ 16337921 (-)
CI01000000_16354158_16360016 NA coding upstream 267899 16353959 ~ 16360213 (-)
G10674 NA non-coding downstream 76189 16007692 ~ 16008384 (-)
G10702 NA non-coding downstream 84402 15999966 ~ 16000171 (-)
G10698 NA non-coding downstream 86909 15997464 ~ 15997664 (-)
G10649 NA non-coding downstream 151197 15933039 ~ 15933376 (-)
G10685 NA non-coding downstream 156293 15928068 ~ 15928280 (-)
G10723 NA non-coding upstream 10504 16096564 ~ 16101382 (-)
G10764 NA non-coding upstream 125551 16211611 ~ 16212215 (-)
G10668 NA non-coding upstream 155460 16241520 ~ 16254522 (-)
G10669 NA non-coding upstream 170459 16256519 ~ 16260121 (-)
CI01000000_14200000_14436182 TENM2 other downstream 1585979 14200000 ~ 14436253 (-)
G9602 NA other downstream 1738039 14341002 ~ 14346534 (-)
G9036 NA other downstream 2357483 13726800 ~ 13727090 (-)
G8699 NA other downstream 2773144 13272585 ~ 13311429 (-)
G8125 NA other downstream 5043664 11040269 ~ 11040909 (-)
G10672 NA other upstream 140227 16226287 ~ 16231126 (-)
G11107 NA other upstream 581058 16667118 ~ 16667947 (-)

Expression


Co-expression Network