G82190 (LOC107562076,LOC107753881,LOC107680504,LOC107718872,LOC107674524,LOC107563570)


Basic Information

Item Value
gene id G82190
gene name LOC107562076,LOC107753881,LOC107680504,LOC107718872,LOC107674524,LOC107563570
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056709.1
NCBI id CM032078.1
chromosome length 24513629
location 15337927 ~ 15342418 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU121695
ATCCCATTCCCATCTTTTTTATTGGAGTTATACCGACAcatattttaacacattcagAAACGGATAAATTGACATTTACAAGTCAGACTGATTGGTCACCAAATCCCAATTAATAGCTTCTATATTAATGGCCAGAAGTGCCTGAACATTCTTAACATACTTGGTCACTTTATAACATATAACACAATgtcacagaattaaaatatgCCCATTAGTGTTTTGTACAAAATCGACTAAAATTGTATTTCCTGAAATTCAGTTTAGGTTTAAAACACTAATGATGAAAAGCAATGCGTAAATGACCCAGAAACATTGGTACCCTGCAGGAGAAAGGGTGCAGATGAGCCAGAAGATGGCACCATCCGTATACTGtttcaaaaaaaactaacaaaaaaaaaaatctccaacAAGACCAAGTCTTCGATGGCACTTAGTGTATATTTGGTCAGTAAAAACATAGTTTCAATTCAACACAgaactgatttatttaatttatttttcaaatcagCTCCACGTGACCGTATGGGCTATTGTAGTTTTTGACTCTGTAGTGTGTCGAGGAAAACAAAACTGTGGAATGAACAAGAAACGAGGCCGTTTCGCGGCCTTTGTAGTGTAAGCGAACACTTTTTAACTCATTCCTGACCGATTTGGAAAGAATTAAgagtaaaaatacatacaattgcATGATTGTCCAGAGAAATACAGACTTCGTGTCTGATATGCATAGTCATTGACACAAGTGCTACACATTTTcgcaatgaataaaaaaactttggTTTTTGTGAAAAACGGGTGGAATGTACACATCTAGCTTCGTGTGACCTGGAGTTGAGCTTCGCACCACTGGATCTCGTGATGGTGGCGGGGGTCGTCTGTTTAGCTGGGCAGATGGTGGAGGAGGAGCTTGGCTACGGACGTTGGCATTGCCATGGCTTCTCTTGTTCAACGAGTTTCGTCTCTGTGGCAACTCGGGGGCCGGGTCACCGTTTGCAGCAGTGGTCGGCTGGCGAtaaggaggaggaggtggaggagcgTTTGAGGAAgtggaggaggatgaagaggagcgAGATGAAAGAGGAGGGTGTCTAGGATGCCCATCCCGAGCTGAAGATGGCGGCGGTGGAGGACCCTTGCTTGCAGGCGGTGGTGGAAGGGGTTTCTCACGACTGTGTGCCCCAGAACCCTGTTGGGCGGAGGAAGGCCCGCGGTTGCCACCGCGATTGAACGGAGGAGGCGGAGGAGGAGCGGAGCTGGTGGGTTTTGAGGATTTGGAGATGTCCGGCACGGAGGGACGATGATTTCGTGGCTGTTCTGGAGGAGAGGAGCGGCCTCCATCACCACGACCGGAGCTGTCCGGTTCAGAATGACTCGAGGCACGAGGGACTGCCGGGCGAGAGCCGGGCGGCCTCAGCGCTGACCGTCCTACAGAGCTG

Function

NR:

description
PREDICTED: WAS/WASL-interacting protein family member 2-like isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU121695 True 1436 lncRNA 0.47 2 15337927 15342418

Neighbor

gene id symbol gene type direction distance location
gpr179 LOC107753843,LOC107718864,LOC107680456,LOC107562070,LOC107563489,LOC106564745 coding downstream 55083 15267975 ~ 15282844 (-)
LOC122353770 NA coding downstream 92227 15242488 ~ 15245700 (-)
LOC122353768 NA coding downstream 123682 15209438 ~ 15214245 (-)
LOC122353767 NA coding downstream 132193 15204939 ~ 15205734 (-)
LOC122353766 NA coding downstream 137287 15197802 ~ 15200640 (-)
jupa jupa,LOC107562072,LOC107753847,LOC107680531,LOC108438667,LOC106564751 coding upstream 7320 15349738 ~ 15371682 (-)
krt98 LOC107562078,LOC107680525,LOC107753857,LOC107563686,LOC107718877,LOC107674549 coding upstream 80734 15423152 ~ 15430070 (-)
hyls1 si:dkey-23f9.4,LOC107680541,LOC107597141,LOC107674570,LOC107563627,LOC107718881,LOC107753882 coding upstream 125552 15467970 ~ 15474238 (-)
ptp4a1 ptp4a1,LOC107563655,LOC107597142 coding upstream 147202 15489620 ~ 15493617 (-)
myom2a LOC107674554,LOC107680534,LOC107597144,LOC107753884,LOC107718897 coding upstream 156696 15499114 ~ 15521716 (-)
G82189 NA non-coding downstream 2104 15335006 ~ 15335823 (-)
G82187 NA non-coding downstream 5858 15331657 ~ 15332069 (-)
LOC122354567 abcc10,LOC107680503,LOC107753844,LOC107718869,LOC107674523 non-coding downstream 17796 15317492 ~ 15320131 (-)
G82181 NA non-coding downstream 23447 15313945 ~ 15314480 (-)
G82162 NA non-coding downstream 32314 15303645 ~ 15305613 (-)
G82160 krt94,LOC107753855,LOC107680518,LOC107562075,LOC107674540,LOC107718880,LOC107563560 non-coding upstream 78387 15420805 ~ 15446837 (-)
G82211 NA non-coding upstream 102104 15444522 ~ 15450399 (-)
G82216 NA non-coding upstream 128888 15471306 ~ 15471689 (-)
G82214 NA non-coding upstream 155232 15497650 ~ 15498104 (-)
G82260 NA non-coding upstream 270728 15613146 ~ 15613851 (-)
LOC122354561 NA other downstream 102491 15233933 ~ 15235436 (-)
G82067 NA other downstream 123869 15204961 ~ 15214058 (-)
G81866 NA other downstream 801535 14534718 ~ 14536392 (-)
chrna4b chrna4b,LOC107753893,LOC107562063,LOC107655994,LOC107665840,LOC107602782,LOC107723056 other downstream 886187 14442601 ~ 14451740 (-)
G81829 NA other downstream 1032803 13885683 ~ 14305124 (-)
LOC122354564 NA other upstream 58500 15400918 ~ 15401691 (-)
pla2r1 pla2r1,LOC107674555,LOC107564855,LOC107747570 other upstream 209938 15552356 ~ 15577065 (-)
LOC122354045 NA other upstream 253147 15595565 ~ 15614937 (-)
LOC122353775 srsf1,srsf1a,LOC107704814,LOC102236359,LOC103148541,LOC106947524,LOC106593141,LOC107661108,LOC107731957,LOC108431323,LOC107554282,LOC107727915,LOC108278759 other upstream 1248388 16590806 ~ 16593930 (-)
LOC122353776 NA other upstream 1261586 16604004 ~ 16606580 (-)

Expression


Co-expression Network