G82214


Basic Information

Item Value
gene id G82214
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056709.1
NCBI id CM032078.1
chromosome length 24513629
location 15497650 ~ 15498104 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU121725
ACTTTAGCAACTTCATGAATCAACAGATGTCTCATCTTGTTATTCCAGGTCCCAGTTCATAACATTTGGAAACTTCAAGTAGGTTATCTATTCATAAAATCAAGTCACCTTAACTTCTGAAGTTTAAGTtgactttaaattatttaggcccgcaaatgctgtaaataaaatcaatcagtCTGCAGCAGATATCAGTCAGGtgtgtggttttattttgaaatcttgTGTGCAAGGAaggtattatttgtttttaatacaaagtTCTTTGTTTAATGCCAAATCAAAAGgaaatgtatgaaatgtatttccttggattcaaatacacaaaaaaaaaaatcagcaaattcagaggttaaataaaatactcaAGTCCCTTGTTCTTGTCAGCATCCTGCTCTTGCGTCTCAATCTCTACACGCTTCATGGCAATAAAATACTGCACAAAGGGCTCTCCC

Function

GO:

id name namespace
GO:0015629 actin cytoskeleton cellular_component

KEGG:

id description
ko00010 Glycolysis / Gluconeogenesis
ko00051 Fructose and mannose metabolism
ko00710 Carbon fixation in photosynthetic organisms
ko00680 Methane metabolism

RNA

RNA id representative length rna type GC content exon number start site end site
TU121725 True 455 lncRNA 0.34 1 15497650 15498104

Neighbor

gene id symbol gene type direction distance location
ptp4a1 ptp4a1,LOC107563655,LOC107597142 coding downstream 4033 15489620 ~ 15493617 (-)
hyls1 si:dkey-23f9.4,LOC107680541,LOC107597141,LOC107674570,LOC107563627,LOC107718881,LOC107753882 coding downstream 23412 15467970 ~ 15474238 (-)
krt98 LOC107562078,LOC107680525,LOC107753857,LOC107563686,LOC107718877,LOC107674549 coding downstream 67580 15423152 ~ 15430070 (-)
jupa jupa,LOC107562072,LOC107753847,LOC107680531,LOC108438667,LOC106564751 coding downstream 125968 15349738 ~ 15371682 (-)
gpr179 LOC107753843,LOC107718864,LOC107680456,LOC107562070,LOC107563489,LOC106564745 coding downstream 214806 15267975 ~ 15282844 (-)
myom2a LOC107674554,LOC107680534,LOC107597144,LOC107753884,LOC107718897 coding upstream 1010 15499114 ~ 15521716 (-)
ly75 LOC107680532,LOC107674542,LOC107563496,LOC107597186,LOC107753885,LOC107718898 coding upstream 25239 15523343 ~ 15550688 (-)
itgb6 itgb6,LOC107747010,LOC107680548,LOC107597145,LOC107674564,LOC107718899 coding upstream 79502 15577606 ~ 15590464 (-)
zgc:193807 NA coding upstream 124818 15622922 ~ 15624013 (-)
LOC122353771 NA coding upstream 132026 15630130 ~ 15631268 (-)
G82216 NA non-coding downstream 25961 15471306 ~ 15471689 (-)
G82211 NA non-coding downstream 47251 15444522 ~ 15450399 (-)
G82160 krt94,LOC107753855,LOC107680518,LOC107562075,LOC107674540,LOC107718880,LOC107563560 non-coding downstream 50813 15420805 ~ 15446837 (-)
G82190 LOC107562076,LOC107753881,LOC107680504,LOC107718872,LOC107674524,LOC107563570 non-coding downstream 155232 15337927 ~ 15342418 (-)
G82189 NA non-coding downstream 161827 15335006 ~ 15335823 (-)
G82260 NA non-coding upstream 115042 15613146 ~ 15613851 (-)
G82286 LOC107593138,LOC107655962,LOC107753871 non-coding upstream 219493 15717597 ~ 15732758 (-)
G82294 NA non-coding upstream 230685 15728789 ~ 15729815 (-)
G82296 NA non-coding upstream 236453 15734557 ~ 15738741 (-)
G82311 NA non-coding upstream 291441 15789545 ~ 15792089 (-)
LOC122354564 NA other downstream 95959 15400918 ~ 15401691 (-)
LOC122354561 NA other downstream 262214 15233933 ~ 15235436 (-)
G82067 NA other downstream 283592 15204961 ~ 15214058 (-)
G81866 NA other downstream 961258 14534718 ~ 14536392 (-)
chrna4b chrna4b,LOC107753893,LOC107562063,LOC107655994,LOC107665840,LOC107602782,LOC107723056 other downstream 1045910 14442601 ~ 14451740 (-)
pla2r1 pla2r1,LOC107674555,LOC107564855,LOC107747570 other upstream 54252 15552356 ~ 15577065 (-)
LOC122354045 NA other upstream 97461 15595565 ~ 15614937 (-)
LOC122353775 srsf1,srsf1a,LOC107704814,LOC102236359,LOC103148541,LOC106947524,LOC106593141,LOC107661108,LOC107731957,LOC108431323,LOC107554282,LOC107727915,LOC108278759 other upstream 1092702 16590806 ~ 16593930 (-)
LOC122353776 NA other upstream 1105900 16604004 ~ 16606580 (-)
LOC122354244 rab7a,rab7,LOC102230535,LOC108254780,LOC106583206,LOC105017191,LOC106582926 other upstream 1280808 16778912 ~ 16912574 (-)

Expression


Co-expression Network