G82447


Basic Information

Item Value
gene id G82447
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056709.1
NCBI id CM032078.1
chromosome length 24513629
location 16610565 ~ 16648554 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU122086
taatatatatatatatatatatatatatatatatatatatatatatatatatatGCGTGTGACAAAATATGTGAAAACATTATGTGGATCTTGCCTGGTTGAATATTGTAAAtcgtatatattttgtaaaatatgtaaaatgctACAGTAATGTATAAATACAGTGTGGATGAATTATacacatgtaaaaatgttttgtctggAAAATGGTATGTTTGAGTAATATCTTGATTCTTgccaaattgtttttttttttttagttttcacacttttttgtgttattgtgctCATTGATACAGTAAGGTACACATAGGGTGATTTGTTTTTAAGGATGTATACAaataatttgtgaaatattcctACTCACATTGTTTATTTCAAGATACAAAATCAGTTGTAGTAGAACACTTAAAATGTTATGCAAtggaaataaacataaaagtgTTCCA

Function

GO:

id name namespace
GO:0004713 protein tyrosine kinase activity molecular_function
GO:0004714 transmembrane receptor protein tyrosine kinase activity molecular_function
GO:0019199 transmembrane receptor protein kinase activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU122086 True 449 lncRNA 0.24 2 16610565 16648554

Neighbor

gene id symbol gene type direction distance location
LOC122354663 LOC107753811,LOC107656084,LOC107593146 coding downstream 54890 16554408 ~ 16555675 (-)
tbl1xr1a tbl1xr1,LOC107600277,LOC107718892,LOC106584305,LOC107557783 coding downstream 137598 16431654 ~ 16472967 (-)
LOC122353772 spata16,LOC107593153 coding downstream 660975 15842161 ~ 15949590 (-)
b3gnt5a b3gnt5a,LOC107593139,LOC107656073,LOC107753797,LOC107674530,LOC107718888,LOC107563744 coding downstream 828876 15776187 ~ 15781689 (-)
LOC122353685 NA coding downstream 962220 15646561 ~ 15648345 (-)
LOC122354689 kcnmb2,LOC107600278,LOC107656067,LOC107699784 coding upstream 6578 16655132 ~ 16660615 (-)
LOC122354367 LOC103358720 coding upstream 117819 16766373 ~ 16769063 (-)
LOC122353589 LOC103358720 coding upstream 241036 16889590 ~ 16891932 (-)
lrig1 lrig1,LOC107753782,LOC107716980,LOC107557776,LOC107600281 coding upstream 310349 16958903 ~ 16992270 (-)
suclg2 suclg2,LOC107753779,LOC107729402,LOC107699794,LOC107656059 coding upstream 447767 17096321 ~ 17184119 (-)
G82445 NA non-coding downstream 857 16606799 ~ 16609708 (-)
G82437 NA non-coding downstream 21805 16588394 ~ 16588760 (-)
LOC122354516 NA non-coding downstream 107131 16499216 ~ 16503434 (-)
G82389 NA non-coding downstream 165334 16427798 ~ 16445231 (-)
G82378 NA non-coding downstream 264845 16341847 ~ 16345720 (-)
G82496 NA non-coding upstream 350107 16998661 ~ 16998866 (-)
G82578 NA non-coding upstream 798605 17447159 ~ 17447681 (-)
LOC122353733 NA non-coding upstream 816604 17465158 ~ 17476011 (-)
G82582 NA non-coding upstream 886294 17534848 ~ 17546075 (-)
G82577 NA non-coding upstream 913587 17562141 ~ 17563010 (-)
LOC122353776 NA other downstream 3985 16604004 ~ 16606580 (-)
LOC122353775 srsf1,srsf1a,LOC107704814,LOC102236359,LOC103148541,LOC106947524,LOC106593141,LOC107661108,LOC107731957,LOC108431323,LOC107554282,LOC107727915,LOC108278759 other downstream 16635 16590806 ~ 16593930 (-)
LOC122354045 NA other downstream 995628 15595565 ~ 15614937 (-)
pla2r1 pla2r1,LOC107674555,LOC107564855,LOC107747570 other downstream 1033500 15552356 ~ 15577065 (-)
LOC122354564 NA other downstream 1208874 15400918 ~ 15401691 (-)
LOC122354244 rab7a,rab7,LOC102230535,LOC108254780,LOC106583206,LOC105017191,LOC106582926 other upstream 130358 16778912 ~ 16912574 (-)
G82585 LOC107691335,LOC107685641,LOC107556181,LOC107749503 other upstream 888949 17537503 ~ 17540171 (-)
G82588 phf2,LOC107556181,LOC107685641 other upstream 902027 17550581 ~ 17559836 (-)
G82590 fam120a,LOC107581418,LOC107685640,LOC107691381,LOC107749502,LOC107556189 other upstream 925048 17573602 ~ 17576984 (-)
LOC122354622 NA other upstream 986252 17634806 ~ 17640897 (-)

Expression


Co-expression Network