G82585 (LOC107691335,LOC107685641,LOC107556181,LOC107749503)


Basic Information

Item Value
gene id G82585
gene name LOC107691335,LOC107685641,LOC107556181,LOC107749503
gene type unknown
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056709.1
NCBI id CM032078.1
chromosome length 24513629
location 17537503 ~ 17540171 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU122317
AAAAGAGCAGCAGCGTGGACAGCTTGGACATGTTCGATGACGACCAGGACCACCTAGAAGCTTGCTTTAAGGACTCCGATTACGtttATCCATCTCTGGAATCTGAGGAGGACAGTCCCATTTTCAAATCAAGAtcgaaaaaaaggaaaaatacagACGACACTCCATATAGTCCAACAGCACGAGTTGGGCCCACTGTACCACGACAGGAGAGACCAGCTCGGGAGGGGGCACGTGTGGCGTCCATAGAGACAGGATTGGCAGCTGCGGCCGCTAAACTGTCTCATCAGGAGGAGCAGAAGatcaagaagaagaaaagagtaCAAAAAGAAGCCCGTGGCTGTAGAGGAGCCTCACAAACTCTCTCAGGACAGCAGCTCTCCAGAACCCACC
>TU122319
AAAAGAGCAGCAGCGTGGACAGCTTGGACATGTTCGATGACGACCAGGACCACCTAGAAGCTTGCTTTAAGGACTCCGATTACGtttATCCATCTCTGGAATCTGAGGAGGACAGTCCCATTTTCAAATCAAGAtcgaaaaaaaggaaaaatacagACGACACTCCATATAGTCCAACAGCACGAGTTGGGCCCACTGTACCACGACAGGAGAGACCAGCTCGGGAGGGGGCACGTGTGGCGTCCATAGAGACAGGATTGGCAGCTGCGGCCGCTAAACTGTCTCATCAGGTTAATACTTTATTAcattaagcattttattatgtttttttaaatgaagtcaatTCTAGGGCTGCTGCACTGTGTTCATTTCCATGCATGTAGCTCATAATCCACAGTTTTCAGTGTCTTTAAGCAGCTCTGTTTAAGTTCTGAGACTGCACTACGACTGCTTTGAGTTTGGCTC

Function

NR:

description
PREDICTED: lysine-specific demethylase phf2-like isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU122317 False 393 TUCP 0.51 4 17537503 17540171
TU122319 True 465 TUCP 0.45 3 17538383 17540171

Neighbor

gene id symbol gene type direction distance location
LOC122353607 kbtbd8,LOC107600285,LOC107753780,LOC107557775,LOC107729395,LOC107656060,LOC107699793 coding downstream 82729 17449267 ~ 17454774 (-)
suclg2 suclg2,LOC107753779,LOC107729402,LOC107699794,LOC107656059 coding downstream 353384 17096321 ~ 17184119 (-)
lrig1 lrig1,LOC107753782,LOC107716980,LOC107557776,LOC107600281 coding downstream 545233 16958903 ~ 16992270 (-)
LOC122353589 LOC103358720 coding downstream 645571 16889590 ~ 16891932 (-)
LOC122354367 LOC103358720 coding downstream 768440 16766373 ~ 16769063 (-)
LOC122353782 LOC107727791,LOC107581429,LOC107691380 coding upstream 38154 17578325 ~ 17590223 (-)
LOC122354584 si:ch211-232b12.5,LOC107727806,LOC107655055,LOC107562773,LOC107749476,LOC107599616,LOC107685688 coding upstream 141889 17682060 ~ 17692681 (-)
LOC122354069 NA coding upstream 262222 17802393 ~ 17805778 (-)
LOC122354072 NA coding upstream 269749 17809920 ~ 17813328 (-)
eogt eogt,LOC107729408,LOC107558884 coding upstream 511842 18052013 ~ 18064487 (-)
LOC122353733 NA non-coding downstream 61492 17465158 ~ 17476011 (-)
G82578 NA non-coding downstream 89822 17447159 ~ 17447681 (-)
G82496 NA non-coding downstream 538637 16998661 ~ 16998866 (-)
G82447 NA non-coding downstream 888949 16610565 ~ 16648554 (-)
G82445 NA non-coding downstream 927795 16606799 ~ 16609708 (-)
G82577 NA non-coding upstream 21970 17562141 ~ 17563010 (-)
G82606 NA non-coding upstream 94632 17634803 ~ 17642527 (-)
LOC122354623 NA non-coding upstream 100865 17641036 ~ 17642527 (-)
G82619 NA non-coding upstream 153748 17693919 ~ 17694508 (-)
G82628 LOC107738115,LOC107654540 non-coding upstream 170280 17710451 ~ 17710806 (-)
LOC122354244 rab7a,rab7,LOC102230535,LOC108254780,LOC106583206,LOC105017191,LOC106582926 other downstream 624929 16778912 ~ 16912574 (-)
LOC122353776 NA other downstream 930923 16604004 ~ 16606580 (-)
LOC122353775 srsf1,srsf1a,LOC107704814,LOC102236359,LOC103148541,LOC106947524,LOC106593141,LOC107661108,LOC107731957,LOC108431323,LOC107554282,LOC107727915,LOC108278759 other downstream 943573 16590806 ~ 16593930 (-)
LOC122354045 NA other downstream 1922566 15595565 ~ 15614937 (-)
pla2r1 pla2r1,LOC107674555,LOC107564855,LOC107747570 other downstream 1960438 15552356 ~ 15577065 (-)
G82588 phf2,LOC107556181,LOC107685641 other upstream 10410 17550581 ~ 17559836 (-)
G82590 fam120a,LOC107581418,LOC107685640,LOC107691381,LOC107749502,LOC107556189 other upstream 33431 17573602 ~ 17576984 (-)
LOC122354622 NA other upstream 94635 17634806 ~ 17640897 (-)
LOC122354587 prpsap2,LOC107720040,LOC107581734,LOC107737786 other upstream 174581 17714752 ~ 17716696 (-)
LOC122353787 prkd2,LOC107728165,LOC107699186,LOC107699228,LOC107752286 other upstream 202745 17742916 ~ 17771610 (-)

Expression


Co-expression Network