G83592 (LOC107727835,LOC107561779,LOC107685696,LOC107600308)


Basic Information

Item Value
gene id G83592
gene name LOC107727835,LOC107561779,LOC107685696,LOC107600308
gene type unknown
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056709.1
NCBI id CM032078.1
chromosome length 24513629
location 20829796 ~ 20839292 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU123804
TGAGTGAGTCTTTGCTGCCGTCTACGCTTTGGATGTCTGGTTTCTGTTTATTGTCCATTTCTTGTTGTTTAGGCTCTTTGCCGGCACATTCTGGCTCTTTAGTGTAGGGCTCCATGGGTGGTAGAGGGGTGCGTCTATCTTGACTCCCTGTAGACTGAGTCCCATGTTGCCTTTCCCTAGTACCCCCATCAGCCTTGCGCTCGGATGAAGTGCCACGTTTCATGGCCTGGAGCTGAGACAGAGGGACAATATCTGCACCCTGAGGTCTGTGCCACACAGTCATGCGGCCAGCAGAGTTATAGTAGTAAAACCTGCCGCTCTGGGGGTCAAAAAGCTCCCACCACTGGTTGCCATCAGCCTGGCGGACAGGGACATCAATGGGCGGGTCCCAGCCACACTCTCCCGTGGCCAGATTCACATACATGCGCTCTTGCGAACGAGGTTCAAGGATTTCCACCCAATCAGAGTTGTCCCGGCCATTTTCTTCACATTGTACGGTCAAACCACAAAAAGTATAAAGGGAAATGGCAAAGACGGTAAAACTTTATCCCCTAGGTCTGTCGGACGTCCTGCGCGAGAGCTTCGTGATTTGCCTTCAATCCCAAACGCTGCTGCGCGCGCGTGAGCCGGATGACTGGGGGTGTCTCGTgggctctctctctcgctctctctctctctctctccaccccctacacacacagatagagcCACTACGATTTGCTACACACTTGAGTAACTGCGACGCCCAAAAACTTTAGTAAAACAAACTACATGCTTTGGTTAGTTTGTGTGTTGGGTTGTACTTTGCTACACGACAGGTGCAAATTCAGGTGGCGTTGGATTCCTA

Function

NR:

description
PREDICTED: rho GTPase-activating protein 39-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU123804 True 847 TUCP 0.52 2 20829796 20839292

Neighbor

gene id symbol gene type direction distance location
olfml3b olfml3b,olfml3,LOC107727861,LOC107749527,LOC107554774,LOC107685708,LOC107655075 coding downstream 127854 20696311 ~ 20701942 (-)
plekhg5a LOC107727824,LOC107655076,LOC107685710,LOC107749498 coding downstream 170909 20624747 ~ 20658887 (-)
mxra8a LOC107655079,LOC107727868,LOC107560385,LOC107749500,LOC107685712 coding downstream 206598 20609670 ~ 20623198 (-)
dvl1b dvl1b,LOC107655081,LOC107727776,LOC107560111,LOC107685713 coding downstream 221298 20580297 ~ 20608498 (-)
si:ch211-15p9.2 NA coding downstream 258141 20568927 ~ 20571655 (-)
myh7ba myh7ba,LOC107727809,LOC107655059,LOC107599906,LOC107685691,LOC108440346,LOC102289245,LOC101480568,LOC102211723,LOC103358826 coding upstream 76793 20916085 ~ 20933311 (-)
snai1a snai1a,LOC107727810,LOC107749479,LOC107581900,LOC107685690,LOC107655058,LOC107599821 coding upstream 112009 20951301 ~ 20954698 (-)
zhx3a si:ch211-232b12.5,LOC107727806,LOC107655055,LOC107562773,LOC107749476,LOC107599616,LOC107685688 coding upstream 138931 20978223 ~ 20989816 (-)
mafbb mafbb,LOC107727785,LOC107749523,LOC107554155,LOC107655035,LOC107581933,LOC107685738 coding upstream 171112 21010404 ~ 21012027 (-)
gata1a gata1a,LOC107727848,LOC107581944,LOC107685680,LOC107655033,LOC107749468 coding upstream 187945 21027237 ~ 21032121 (-)
G83531 NA non-coding downstream 34905 20772508 ~ 20794891 (-)
G83547 NA non-coding downstream 89019 20740246 ~ 20740777 (-)
G83545 LOC107727878,LOC107560645,LOC107655028 non-coding downstream 92538 20736502 ~ 20737258 (-)
G83382 NA non-coding downstream 185637 20578726 ~ 20644159 (-)
G83367 NA non-coding downstream 252873 20575061 ~ 20576923 (-)
G83602 zgc:92107,LOC107727835,LOC107561779,LOC107685696,LOC107600308,LOC107749482 non-coding upstream 9266 20848558 ~ 20852593 (-)
G83603 NA non-coding upstream 17449 20856741 ~ 20858442 (-)
G83593 NA non-coding upstream 52627 20891919 ~ 20893277 (-)
G83631 NA non-coding upstream 119843 20959135 ~ 20959438 (-)
G83649 NA non-coding upstream 173388 21012680 ~ 21117052 (-)
G83230 golt1a,got1a,LOC107727772 other downstream 658491 20167305 ~ 20171305 (-)
trnav-aac_25 NA other downstream 2258573 18571151 ~ 18571223 (-)
trnav-aac_24 NA other downstream 2259348 18570376 ~ 18570448 (-)
fgd5a LOC107728634,LOC107600300,LOC107656043,LOC107696838,LOC107746894 other downstream 2598275 18197829 ~ 18231521 (-)
mustn1b mustn1,mstn1,LOC103145767 other downstream 2692408 18135884 ~ 18137388 (-)
kaznb kaznb,LOC107597004,LOC107749453,LOC107565459,LOC107727805,LOC107685722,LOC108424680,LOC105028825,LOC106582810,LOC102784869 other upstream 384975 21224267 ~ 21349112 (-)
efcc1 efcc1,LOC107727832,LOC107685653,LOC107749439,LOC107551117,LOC107581369 other upstream 718732 21558024 ~ 21576331 (-)
G83871 fam120a,LOC107685640,LOC107581418,LOC107749502,LOC107691381,LOC107556189 other upstream 1179078 22018370 ~ 22021101 (-)
cass4 LOC107727791,LOC107581429,LOC107691380 other upstream 1181323 22020615 ~ 22035203 (-)
si:ch211-220m17.5 guca2b,LOC107556375,LOC107727796,LOC107749519,LOC107581980,LOC107685730,LOC107691332 other upstream 1302761 22142053 ~ 22146937 (-)

Expression


Co-expression Network