XLOC_006611


Basic Information

Item Value
gene id XLOC_006611
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007124.7
NCBI id CM002897.2
chromosome length 52186027
location 24346989 ~ 24351543 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00013481
TCCACACAAAGTTAAACCCTGACTATCTGCCCAATGAATCAAAGCACAGGCTCAGAGAAACATTAGCCTCGCCTCCAAAGCCACAATTGATTGCACACAGCTGTTTGCAAATACACCTTTACGTCGAGCAGTGAAAGCCCTTTGTTAAGTCCGCTAATCCCTCATGGCCTCTAAATCTAGTCTGTGGGGGGTCCTGtggtgtttatttgtatttttttgtgcaCAAATATATGTTCCATCTACAAAATGTTGTTATACCCACtggatTGAGATGATTATACCAACTGGATTGAATGCTTTGCTTATACACATAGAAATATacactacactgtt

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00013481 True 333 lncRNA 0.41 2 24346989 24351543

Neighbor

gene id symbol gene type direction distance location
XLOC_006610 si:ch211-202m22.1 coding downstream 14494 24329771 ~ 24332495 (-)
XLOC_006609 si:ch211-202m22.1 coding downstream 18195 24325413 ~ 24328794 (-)
XLOC_006608 rab4a coding downstream 35361 24295896 ~ 24311628 (-)
XLOC_006607 CR762497.1 coding downstream 60599 24283670 ~ 24286390 (-)
XLOC_006606 urb2 coding downstream 83307 24231327 ~ 24263682 (-)
XLOC_006612 rhoua coding upstream 20272 24371815 ~ 24379271 (-)
XLOC_006613 tbp coding upstream 29801 24381344 ~ 24396199 (-)
XLOC_006614 cep68 coding upstream 69972 24421515 ~ 24429095 (-)
XLOC_006615 slc1a4 coding upstream 78375 24429918 ~ 24448278 (-)
XLOC_006616 NA coding upstream 221543 24573086 ~ 24574746 (-)
XLOC_006471 BX537274.2 misc downstream 14082084 10264741 ~ 10264905 (-)
XLOC_006338 rn7sk misc downstream 23520764 825904 ~ 826225 (-)
XLOC_006605 CR762497.2 non-coding downstream 219810 24127063 ~ 24127179 (-)
XLOC_006602 AL772289.1 non-coding downstream 385583 23961292 ~ 23961406 (-)
XLOC_006597 NA non-coding downstream 935358 23408029 ~ 23411631 (-)
XLOC_006595 NA non-coding downstream 1129171 23212759 ~ 23217818 (-)
XLOC_006617 NA non-coding upstream 225722 24577265 ~ 24578022 (-)
XLOC_006618 AL831745.1 non-coding upstream 233681 24585224 ~ 24588220 (-)
XLOC_006619 NA non-coding upstream 238877 24590420 ~ 24623225 (-)
XLOC_006620 AL831745.2 non-coding upstream 250867 24602410 ~ 24606627 (-)

Expression


Co-expression Network