ndufs7 (ndufs7,LOC107597168,LOC107680537,LOC107747413,LOC107685366,LOC107553547)


Basic Information

Item Value
gene id ndufs7
gene name ndufs7,LOC107597168,LOC107680537,LOC107747413,LOC107685366,LOC107553547
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056709.1
NCBI id CM032078.1
chromosome length 24513629
location 13221839 ~ 13226883 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043251266.1
CGGCGAGGAGGCGCTGCGTCACCGGAAGTAGATGGTAGGCAAACATGGCGGCGTTGATGGTTCCCCGCCTTCCCCTGGATCCTTTAATATAAgGGCCATTTCATCactttctgctcataagaaggtTCCTTTGACAGACAAAAAGGATGAAAATATCTCGAgTCTGGTCCCGTTCAGAGAGAAAAGCACAGCTCTGGCCCAAAAACCAGCTTCAGCGGCCAGCAGCAAGGCTGAATACATCATCACCAAGCTGGACGATCTGGTCAACTGGGCACGCAGAAGCTCCCTGTGGCCCATGACCTTTGGCCTGGCGTGTTGCGCTGTGGAGATGATGCACATGGCGGCTCCTCGTTACGACATGGATCGGTTCGGAGTAGTGTTCAGAGCCAGCCCCAGACAGGCCGACGTCATGATAGTCGCAGGGACTTTAACCAACAAAATGGCTCCTGCACTGCGTAAGGTGTATGACCAAATGCCGGAGCCCAGATACGTCATTTCGATGGGAAGCTGTGCTAACGGCGGTGGCTACTATCACTACTCTTATTCGGTGGTCCGGGGTTGTGATCGCATCGTTCCCGTGGATATCTACGTCCCAGgTTGTCCTCCGACAGCCGAGGCTCTGCTTTACGGAACGCTGCAGCTACAGAAAAAGATCAAGCGAGAAAAGAGAATGACAATTTGGTATCGCAAGTGAGGCgtgattgtgtttgtgtgtctgctcTGAGATGTGTATTTAATATCATTTGTTGTGTTCAGAAGGCTGATTTCTCAGGGGCTGCTCTGGTTTGAGCTCAAGCTCCTCCTCTTTGTAGCTACAATAAAGACTTTCTGCTTCA

Function

symbol description
ndufs7 Predicted to enable NADH dehydrogenase (ubiquinone) activity. Predicted to be involved in aerobic respiration; electron transport coupled proton transport; and mitochondrial respiratory chain complex I assembly. Predicted to be part of mitochondrial respiratory chain complex I. Is expressed in several structures, including eye; immature eye; musculature system; optic tectum; and pharyngeal arch 3-7 skeleton. Human ortholog(s) of this gene implicated in nuclear type mitochondrial complex I deficiency 3. Orthologous to human NDUFS7 (NADH:ubiquinone oxidoreductase core subunit S7).

NR:

description
NADH dehydrogenase [ubiquinone] iron-sulfur protein 7, mitochondrial-like isoform X4

GO:

id name namespace
GO:0055114 oxidation-reduction process biological_process
GO:0008137 NADH dehydrogenase (ubiquinone) activity molecular_function
GO:0046872 metal ion binding molecular_function
GO:0051539 4 iron, 4 sulfur cluster binding molecular_function
GO:0048038 quinone binding molecular_function

KEGG:

id description
K00331 nuoB; NADH-quinone oxidoreductase subunit B

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043251266.1 True 836 mRNA 0.51 8 13221839 13226883

Neighbor

gene id symbol gene type direction distance location
ctdspl3 ctdspl3,LOC107747402,LOC107680535,LOC107553546,LOC107597167 coding upstream 1159 13214308 ~ 13220680 (+)
LOC122353677 LOC107747780 coding upstream 59926 13160142 ~ 13161913 (+)
LOC122353835 flnb,LOC107680511,LOC107657976,LOC107712990 coding upstream 62969 12824930 ~ 13158870 (+)
LOC122353891 slmapa,slmap,LOC107680512,LOC107657974,LOC107557391 coding upstream 165963 13034637 ~ 13055876 (+)
LOC122353848 LOC107657964,LOC107741992,LOC107680499,LOC108442067,LOC108271057 coding upstream 266473 12927330 ~ 12955366 (+)
dazap1 dazap1,LOC107680526,LOC107757952,LOC107747374,LOC107685225 coding downstream 6882 13233765 ~ 13252149 (+)
rps15 rps15,rig,LOC107685215,LOC107578086 coding downstream 26468 13253351 ~ 13255161 (+)
ushbp1 ushbp1,LOC107747291,LOC107680560,LOC107685353 coding downstream 89697 13316580 ~ 13329122 (+)
nr2f6b nr2f6b,LOC107680506,LOC107747262 coding downstream 109236 13336119 ~ 13346199 (+)
tax1bp3 tax1bp3,LOC107685157,LOC107747253,LOC107680510 coding downstream 120239 13347122 ~ 13351332 (+)
LOC122353896 NA non-coding upstream 202704 12977589 ~ 13019135 (+)
G81424 LOC107680494,LOC107574810 non-coding upstream 245684 12965771 ~ 12976155 (+)
G81420 NA non-coding upstream 297668 12865979 ~ 12924171 (+)
G81448 NA non-coding downstream 83438 13310321 ~ 13312912 (+)
G81454 NA non-coding downstream 87679 13314562 ~ 13315699 (+)
G81458 NA non-coding downstream 123051 13349934 ~ 13393135 (+)
G81468 LOC107747585,LOC107680549,LOC107597153,LOC107757943 non-coding downstream 179795 13406678 ~ 13651018 (+)
LOC122354466 NA non-coding downstream 183597 13410480 ~ 13413881 (+)
arid3a arid3a,LOC107685377,LOC107680546,LOC107553545,LOC107747603,LOC107597199 other upstream 11149 13164761 ~ 13210690 (+)
slmapa slmapa,slmap,LOC107680512,LOC107657974,LOC107557391 other upstream 164619 12768207 ~ 13057220 (+)
G81416 rala,LOC107694485,LOC107741991,LOC107552396,LOC107713003,LOC107657963,LOC105901921 other upstream 342526 12875513 ~ 12879313 (+)
G81364 rps23,rs23,LOC107680479,LOC106566095,LOC107578001 other upstream 520955 12669789 ~ 12700884 (+)
G81268 NA other upstream 636198 12582915 ~ 12585641 (+)
G81434 NA other downstream 2060 13228943 ~ 13231092 (+)
LOC122354403 LOC107747219,LOC107747210,LOC107680505,LOC107757944,LOC107597155,LOC559131,LOC107580225,LOC107685131 other downstream 147138 13374021 ~ 13383843 (+)
ranbp3a LOC107597153,LOC107680549,LOC107757943,LOC107685118 other downstream 175404 13402287 ~ 13410126 (+)
LOC122353908 vmac,LOC107680554,LOC107757942,LOC107685109 other downstream 233581 13460464 ~ 13465416 (+)
LOC122353915 vmac,LOC107680554,LOC107685109,LOC107757942 other downstream 474352 13701235 ~ 13704975 (+)

Expression


Co-expression Network