CI01000000_16813179_16823209


Basic Information

Item Value
gene id CI01000000_16813179_16823209
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000000
NCBI id null
chromosome length 19091038
location 16812853 ~ 16823302 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000000_16813179_16823209.mRNA
AGGCGCACACATTACAATCCATTAAGCCTTTTAAATGGAGACATAACAGATGCTGAAAGAATATGAGGCGAAGTCAGATGCTAAAAGAAAGTGATGGGAAAGAAAAGAGTGTGTGTGAGTGTGAAAAGGACTCACTTGAGAACTCCCCACACAGCACTAGACAGGAACAGGCCTAGTGTTGCAGAACCAGAGGAGCAGTTTGGAGGCAGAGGAGCAGCCACTGGAGGAGAGGAGGACAGGGGGCAGCAGAGGGCAGCACACATGAAGGACAGAGAGGAAGAACAGGAGGAGAGAACAGGAAACGCAGCTCCTGCCTCCAGCGTCTCCGGCAGAGCCCCTGAGATCCCAACATACTTCACTCCAATGTTTATCAGCCAGATTAACATGTTGACAGCCCCACCATTTGGAAACAGTTCCACGATTTATGTCCCAGGCAGGTTTCCAAAGGGCTGTGAAAAACAAAGAGCGGTAGGACATTCTGAAGGGCCTTTACAGTCATTTGCACAGCCCGATCTGGACCCGTTTTCAGTGGGACATGTTTAGACAACAACTTCTGTGGTGGAGAGGCCTTTGAAGACTTTCAAACATCTGTGGGTTCATTGTTCAAGCTGGGTGAACAGCGAGTGTCTCTGATCTTGTGTGTTTGTATACTGTGGAGGTCTGGAAAGCTATATTAATATCTTTCTATTTTAACATTGATAGTGAACAGTTTATGCAAGGAAATGTTCCTGCTATCTGTGTTAGTATGAAAAATTTTGCTCTATCACTGCAGTTGATATGACATGACATGGACTGCATTACTTGTTTAATTAAAGGTGCACTAATGATTTCTGTTTGTAACTATAATAGATGGCATTTGGAAGAATAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000000_16813179_16823209.mRNA True 869 mRNA 0.45 2 16812853 16823302

Neighbor

gene id symbol gene type direction distance location
CI01000000_16639394_16651227 NA coding downstream 161626 16639394 ~ 16651227 (-)
CI01000000_16628234_16631045 THOC3 coding downstream 181039 16627697 ~ 16631814 (-)
CI01000000_16583129_16583311 NA coding downstream 229542 16582968 ~ 16583471 (-)
CI01000000_16395230_16423976 GLRA1 coding downstream 388877 16394132 ~ 16423976 (-)
CI01000000_16354158_16360016 NA coding downstream 452640 16353959 ~ 16360213 (-)
CI01000000_16946558_16965306 PPARGC1B coding upstream 123155 16946457 ~ 16965306 (-)
CI01000000_16992347_17023908 NA coding upstream 168306 16991608 ~ 17024074 (-)
CI01000000_17034650_17052531 ARHGEF37 coding upstream 211337 17034639 ~ 17052531 (-)
CI01000000_17139308_17145015 NA coding upstream 315880 17139182 ~ 17145409 (-)
CI01000000_17156576_17156872 NA coding upstream 332992 17156294 ~ 17157082 (-)
G11121 NA non-coding downstream 104460 16708020 ~ 16708393 (-)
G11108 NA non-coding downstream 144431 16668215 ~ 16668422 (-)
G11086 NA non-coding downstream 227188 16585444 ~ 16585665 (-)
G10872 NA non-coding downstream 285086 16527298 ~ 16527767 (-)
G11173 NA non-coding upstream 1284 16824586 ~ 16825343 (-)
G11175 NA non-coding upstream 5928 16829230 ~ 16829465 (-)
G11176 NA non-coding upstream 7252 16830554 ~ 16830832 (-)
G11177 NA non-coding upstream 8708 16832010 ~ 16832230 (-)
G11209 NA non-coding upstream 9899 16833201 ~ 16833460 (-)
G11107 NA other downstream 144906 16667118 ~ 16667947 (-)
G10672 NA other downstream 581727 16226287 ~ 16231126 (-)
CI01000000_14200000_14436182 TENM2 other downstream 2314259 14200000 ~ 14436253 (-)
G9602 NA other downstream 2466319 14341002 ~ 14346534 (-)

Expression


Co-expression Network