CI01000000_16835058_16848950


Basic Information

Item Value
gene id CI01000000_16835058_16848950
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000000
NCBI id null
chromosome length 19091038
location 16834920 ~ 16849092 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000000_16835058_16848950.mRNA
GAATAAAAACACTGGATAAAAGATGGAATACAGAACAAAAGATGATTATTTTCCTTGTAAACATTTTAAGAGTGAGTAATTCATATGTTGAAATTGTTACAAATGCAAAACAAACATTTGTGTTGTTGATTTTGAGTAATGAATGCTAAGAATAAGCCGTCACCTGAGACGATACAGGCAGGTAAACACCATCTGCTATCTTGCAAGGCTTTCCTCACTAGTCTAGCTATTTCCATTATTCATGCGCTAGTCACCGGTTCTTACCTGTCCTCCTCCACACCATATCTGTTTCTTATTTCTTTCAGAAAACAATCAGGTCATGGTCCTGATCTGGTGCCACTCAACTCCACAATAATCAGGTCTTATATCTGTGAGCGTGTGTTTGAAAAGCCTCAGACAGTTCTGGGAAGACAAACACACACATATACGTGCCGGCTGAGGAAATGGCATGATCCTTTGTGGATTGACATTGCCATCTGGCTGACACTGAAGAAGAAAAGGAGGTTCACGGCTTGTGTGGCTACAGACACAGAAAAGGAGCAATCGCAGGGCAATGTTTCCTGTTTCAGTAATTTAACAAAACAAGAGACGTCTGTCTATCTAGATGCACAAATGTATTCAGTTCTTCACAATGGAAACCACATTGAACAAGAGAAACTGTCAATACAGAATGACACAGAGTCCCAGGAGTCATGTTTCTGACACAGGTCACCCTCTAATGAGGACCATCACTGGAAGGTGCCATTTCTTACCGCCCTGCCTGCAGCTCAGAACCGACCGGAGCATTTCAGGACTCGAGTACTGGGAGCTGGACTGAACTGTTTGCTCAAAGAGCTGCTGAACA

Function

NR:

description
5-hydroxytryptamine receptor 4 isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000000_16835058_16848950.mRNA True 844 mRNA 0.42 4 16834920 16849092

Neighbor

gene id symbol gene type direction distance location
CI01000000_16781396_16802242 HTR4 coding upstream 32502 16781396 ~ 16802418 (+)
CI01000000_16676128_16679215 SLC26A2 coding upstream 155680 16676036 ~ 16679240 (+)
CI01000000_16611284_16612778 CPLX2, CPLX1 coding upstream 221035 16611284 ~ 16613885 (+)
CI01000000_16573665_16580545 SLC25A48 coding upstream 253962 16573665 ~ 16580958 (+)
CI01000000_16468276_16479177 NA coding upstream 353861 16467489 ~ 16481059 (+)
CI01000000_16861880_16863508 NA coding downstream 11351 16860443 ~ 16863777 (+)
CI01000000_16871696_16877904 NA coding downstream 22604 16871696 ~ 16878004 (+)
CI01000000_16878307_16893681 MATR3L1.2 coding downstream 29119 16878211 ~ 16894061 (+)
CI01000000_16894331_16900440 NA coding downstream 45143 16894235 ~ 16900443 (+)
CI01000000_16903722_16914680 NA coding downstream 54630 16903722 ~ 16915079 (+)
G10968 NA non-coding upstream 97673 16737032 ~ 16737247 (+)
G10956 NA non-coding upstream 143370 16691262 ~ 16691550 (+)
G10912 NA non-coding upstream 207612 16626953 ~ 16627308 (+)
G10911 NA non-coding upstream 208428 16626008 ~ 16626492 (+)
G10903 NA non-coding upstream 250802 16581312 ~ 16584118 (+)
G10937 NA non-coding downstream 52838 16901930 ~ 16902606 (+)
G10934 NA non-coding downstream 72200 16921292 ~ 16921561 (+)
G11019 NA non-coding downstream 147547 16996639 ~ 16996931 (+)
G11028 NA non-coding downstream 155310 17004402 ~ 17004656 (+)
G11039 NA non-coding downstream 166248 17015340 ~ 17015573 (+)
G10201 NA other upstream 904358 15930266 ~ 15930562 (+)
G9201 NA other upstream 2599979 14215024 ~ 14234941 (+)
G7522 NA other upstream 4655912 12178369 ~ 12179008 (+)
G7514 NA other upstream 4697912 12136522 ~ 12137008 (+)
G7153 NA other upstream 5589287 11244457 ~ 11245633 (+)
CI01000000_17339270_17345013 CXCL14, CXL14 other downstream 490062 17339154 ~ 17346200 (+)
G11465 NA other downstream 1034861 17883953 ~ 17887462 (+)
G11521 NA other downstream 1183647 18032739 ~ 18164112 (+)
G11801 NA other downstream 1831775 18674116 ~ 18745376 (+)

Expression


Co-expression Network