acot8 (acot8,LOC107670930,LOC107730625,LOC107722006)


Basic Information

Item Value
gene id acot8
gene name acot8,LOC107670930,LOC107730625,LOC107722006
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056709.1
NCBI id CM032078.1
chromosome length 24513629
location 1260783 ~ 1264227 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043251563.1
GCTTGTTATCTGTTTGACCAATAGACGTCCTCTGCGTTCGAAGCAGTGAATCGTGGTTCAGTTGATTCGGTGAATCAGAAGGATTCATTCTCCCGTTACTAACGTAAGCTCATCCATTTGTACGCACCGATGTAGCCACATGAAGCATTGTTTGCCTAAACATGTCATTGTGACATTTAAAGAAAGTGACACGCCACGTGAACCTTTGGCGCAAACGAATCGTTTAAAGGTCGTGAAGTTTGAATCGCCTCGGAAGAGATCCGCCCTCCGCGCAGAGACAGGAAAGATGGCCGAAAGCGGCAGTGAATCTCGAGCTGATGTTACAGCAAACCACGCGTCCGAGTCAGGGGAAGCTGACCTCAGGAGCGTCCTGGTCACAAGCGTGTTGAATTTAGACAAGCTGGACACCGACCTGTACAGAGGCTCTCATCACTGGGTTCCTCGCACTAAACGTCTGTTCGGGGGACAGATTGTTGGACAGGCTCTTGTAGCTGCAGCCAATTCTGTCAGTGATGACCTCTATGCCCATTCACTGCACTGCTATTTTGTGAGAGCAGGGGACCCGAAGGTGCCTGTGCTCTACCAGGTGGAAAGGACTCGGGACGGCCGCAGTTTCTGCGTGCGCTCCGTCAAAGCCATTCAGCACGGTCAGCCCATCCTGATCTGTCAGGCGTCGTTTCACACGCGGCAGCCGAGTCCCCTGGAGCACCAGTTCAGCATGCCCTCGGTGCCGCCGCCGGACGCGCTGCTCACCATAGAGGAGCTCATTCAGAGATACCTCAGcGATCCAAACTTGGCAGACAACACGCGACAGGGTCTGAATAAAATCCTTGCCGATGAAGTGCCTATAGAGATCAAGCCGGTCAACCCTCCTGATTTCTACAGGCGTGTTGCCATGGAGCCAAAGAAATTGTTCTGGGTGCGAGCCAGAGGGCATATAGGACCCGGGGACATGAAGCTGCACTGCTGTGTGGCAGCGTATGTGTCCGACTACTCCTTCCTGGGAACGGCTCTGTTACCTCACCCGAAGCACAGGGCCCAGTTCTCCGCCTCTCTGGATCATGCCATGTGGTTTCACAGCACCTTCAGAGCGGACGAGTGGATGCTGTACGAATGCGAAAGCCCGTGGTCAGGAGGGAGCAGAGGCTTAGTCCAGGGCCGCTTGTGGAGACAAGATGGCGTTCTCGCGGCGTCCTGCGCACAAGAGGGAGTGATACGAGTGAAGAGCTCTCCTCGGAGTCAGTTATAGAGGACTGAAGAAAGAGTACCAGACTCTCGAGATGCCTTACAATCACTGCTGTCGAaagattaatcgcgattaatcgcatccaaaacaaACGTTTACGTCatatatgtgtttaaataaatacgCACATGCGTTTAAGAAGTAGatgcctagtcctagactaaaatgtaagtctgagctgtttcaaccgCATAGAAACCTATACTGgctaaatttaaaatacatcagtgcctttgttttgtcaaaAACCCCAATGTTTTATCATATGGCCTGGTCAACTAATGATTAACTAAGCGCTGTCTATGAACATATATAgggatataaataaatacaaggaAATATGGATGAGTgtatattcataaatacacacagtacacacattacaacgtaaataaaaactttggatgcaattaatcgctaCCTACTacttacaataatttaaaaactgatttttttgtcatattgcGAAGCACGACCAATGTTAAGATTGTCTGCAGTGCTATATGGCAGCATTAACGAGACTTTATGATTTAGATTAATCTTGTTTAAAAGTCTACATCAGAACGGATTCAACGTCTTtgcaggtgtgtgtttttaacgATGGGACTTTGCGTCttcgtttttgtatttttgagttTACGACCAAAACACTTGAAGTCTTCCACGACAAGCTCCAGTCACACAGCGAGGTGCACTTTAATTATatatagcattatttaaaatcgTTATCAATAAACGGATCGACCTGA
>XM_043251564.1
gtaaaattacaaagGTAACTAGCTGCTTGTTATCTGTTTGACCAATAGACGTCCTCTGCGTTCGAAGCAGTGAATCGTGGTTCAGTTGATTCGGTGAATCAGAAGGATTCATTCTCCCGTTACTAACGTCGTGAAGTTTGAATCGCCTCGGAAGAGATCCGCCCTCCGCGCAGAGACAGGAAAGATGGCCGAAAGCGGCAGTGAATCTCGAGCTGATGTTACAGCAAACCACGCGTCCGAGTCAGGGGAAGCTGACCTCAGGAGCGTCCTGGTCACAAGCGTGTTGAATTTAGACAAGCTGGACACCGACCTGTACAGAGGCTCTCATCACTGGGTTCCTCGCACTAAACGTCTGTTCGGGGGACAGATTGTTGGACAGGCTCTTGTAGCTGCAGCCAATTCTGTCAGTGATGACCTCTATGCCCATTCACTGCACTGCTATTTTGTGAGAGCAGGGGACCCGAAGGTGCCTGTGCTCTACCAGGTGGAAAGGACTCGGGACGGCCGCAGTTTCTGCGTGCGCTCCGTCAAAGCCATTCAGCACGGTCAGCCCATCCTGATCTGTCAGGCGTCGTTTCACACGCGGCAGCCGAGTCCCCTGGAGCACCAGTTCAGCATGCCCTCGGTGCCGCCGCCGGACGCGCTGCTCACCATAGAGGAGCTCATTCAGAGATACCTCAGcGATCCAAACTTGGCAGACAACACGCGACAGGGTCTGAATAAAATCCTTGCCGATGAAGTGCCTATAGAGATCAAGCCGGTCAACCCTCCTGATTTCTACAGGCGTGTTGCCATGGAGCCAAAGAAATTGTTCTGGGTGCGAGCCAGAGGGCATATAGGACCCGGGGACATGAAGCTGCACTGCTGTGTGGCAGCGTATGTGTCCGACTACTCCTTCCTGGGAACGGCTCTGTTACCTCACCCGAAGCACAGGGCCCAGTTCTCCGCCTCTCTGGATCATGCCATGTGGTTTCACAGCACCTTCAGAGCGGACGAGTGGATGCTGTACGAATGCGAAAGCCCGTGGTCAGGAGGGAGCAGAGGCTTAGTCCAGGGCCGCTTGTGGAGACAAGATGGCGTTCTCGCGGCGTCCTGCGCACAAGAGGGAGTGATACGAGTGAAGAGCTCTCCTCGGAGTCAGTTATAGAGGACTGAAGAAAGAGTACCAGACTCTCGAGATGCCTTACAATCACTGCTGTCGAaagattaatcgcgattaatcgcatccaaaacaaACGTTTACGTCatatatgtgtttaaataaatacgCACATGCGTTTAAGAAGTAGatgcctagtcctagactaaaatgtaagtctgagctgtttcaaccgCATAGAAACCTATACTGgctaaatttaaaatacatcagtgcctttgttttgtcaaaAACCCCAATGTTTTATCATATGGCCTGGTCAACTAATGATTAACTAAGCGCTGTCTATGAACATATATAgggatataaataaatacaaggaAATATGGATGAGTgtatattcataaatacacacagtacacacattacaacgtaaataaaaactttggatgcaattaatcgctaCCTACTacttacaataatttaaaaactgatttttttgtcatattgcGAAGCACGACCAATGTTAAGATTGTCTGCAGTGCTATATGGCAGCATTAACGAGACTTTATGATTTAGATTAATCTTGTTTAAAAGTCTACATCAGAACGGATTCAACGTCTTtgcaggtgtgtgtttttaacgATGGGACTTTGCGTCttcgtttttgtatttttgagttTACGACCAAAACACTTGAAGTCTTCCACGACAAGCTCCAGTCACACAGCGAGGTGCACTTTAATTATatatagcattatttaaaatcgTTATCAATAAACGGATCGACCTGA

Function

symbol description
acot8 Predicted to enable acyl-CoA hydrolase activity. Predicted to be involved in acyl-CoA metabolic process and fatty acid catabolic process. Predicted to be active in peroxisomal matrix. Orthologous to human ACOT8 (acyl-CoA thioesterase 8).

NR:

description
acyl-coenzyme A thioesterase 8

GO:

id name namespace
GO:0006637 acyl-CoA metabolic process biological_process
GO:0047617 acyl-CoA hydrolase activity molecular_function

KEGG:

id description
K11992 ACOT8, PTE; acyl-CoA thioesterase 8

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043251563.1 True 1995 mRNA 0.47 6 1260807 1264227
XM_043251564.1 False 1893 mRNA 0.47 7 1260783 1264227

Neighbor

gene id symbol gene type direction distance location
ppp1r3db LOC107730614,LOC107551316,LOC107654797,LOC107722003 coding upstream 47238 1211847 ~ 1213545 (+)
znf831 LOC107558955,LOC107730612,LOC107670927 coding upstream 80984 1168152 ~ 1179799 (+)
nuf2 nuf2,LOC107570127,LOC107550318 coding upstream 155077 1098493 ~ 1105706 (+)
zgc:77375 zgc:77375,LOC107700631,LOC107758152,LOC108431553,LOC105013113 coding upstream 167710 1083971 ~ 1093073 (+)
isy1 isy1,LOC107700632,LOC108431508,LOC108254962,LOC102298134,LOC101070566 coding upstream 177530 1077539 ~ 1083253 (+)
srsf6b LOC100690823,LOC103156038,LOC101480010,LOC102289851 coding downstream 58 1264285 ~ 1269596 (+)
ift52 ift52,LOC107730620 coding downstream 5856 1270083 ~ 1276013 (+)
mybl2b mybl2,mybl2b,LOC107654799,LOC107670940 coding downstream 13553 1277780 ~ 1284953 (+)
dtx3l2.2 LOC107654785 coding downstream 20883 1285110 ~ 1290204 (+)
LOC122354215 LOC107654785 coding downstream 26880 1291107 ~ 1300799 (+)
G78380 NA non-coding upstream 37948 1217224 ~ 1222835 (+)
G78370 NA non-coding upstream 65320 1195224 ~ 1195463 (+)
LOC122353680 NA non-coding upstream 186203 1071074 ~ 1074580 (+)
G78089 NA non-coding upstream 835705 424386 ~ 425078 (+)
G78081 LOC107747831,LOC107561793,LOC107684010 non-coding upstream 852379 405735 ~ 408404 (+)
G78400 LOC107747473,LOC107550334,LOC107654802 non-coding downstream 12288 1276515 ~ 1277127 (+)
G78455 NA non-coding downstream 158506 1422733 ~ 1425764 (+)
G78467 NA non-coding downstream 205441 1469668 ~ 1471384 (+)
G78468 NA non-coding downstream 214947 1479174 ~ 1482149 (+)
G78479 NA non-coding downstream 249652 1513879 ~ 1514178 (+)
LOC122353696 LOC107670931,LOC107551313 other upstream 69062 1186866 ~ 1191721 (+)
cnbpb cnbpb,cnbp,LOC107742027,LOC107675970,LOC108431552,LOC106566283 other upstream 183384 1074707 ~ 1077399 (+)
tsen2 tsen2 other upstream 220544 1034409 ~ 1040239 (+)
atg7 atg7,vgll4,vgll4b,LOC107697561,LOC107750032,LOC107750033,LOC107697562 other upstream 346984 848175 ~ 913799 (+)
atp2b2 atp2b2,LOC107561799,LOC107570616,LOC107746712,LOC102776443,LOC107697566 other upstream 551293 603138 ~ 709490 (+)
rbms2a rbms2,LOC107730618,LOC108424578,LOC107654803,LOC107565002,LOC107709509,LOC102312407,LOC107681488,LOC107551328 other downstream 155293 1419520 ~ 1448960 (+)
rargb LOC107730622,LOC107681487,LOC107551317,LOC107681495,LOC107754558,LOC107557540,LOC108424631,LOC105907526 other downstream 221480 1485707 ~ 1517963 (+)
G78500 NA other downstream 326517 1590744 ~ 1593125 (+)
G78506 inpp1,LOC107737355,LOC107683640,LOC107730897 other downstream 380404 1644631 ~ 1726097 (+)
nabp2 si:ch73-190f16.2,nabp2,LOC107572067,LOC107557546,LOC107683643,LOC107675336,LOC107737367,LOC106565411 other downstream 413999 1678226 ~ 1681200 (+)

Expression


Co-expression Network