LOC122353752


Basic Information

Item Value
gene id LOC122353752
gene name NA
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056709.1
NCBI id CM032078.1
chromosome length 24513629
location 13777335 ~ 13790405 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043251640.1
ATGAGGCAACCTTCTGCAATCTACCATGTGCACAGAAAAACATCAACACCCAACAACATCCCTGGCGTTTCTCCAAAATCCATCCCCTTTTACACAAGCGCCCTCCCTCCCCTTCAGAGCCGGACGCAGAGGAATTTACCTCAGCCACCCCTGGCCGTCTGCCCTGCTCAGCAGACTAAACAACAGAGAGAGGACAGAAGCGGGAACAGCTGCAAACCTGGTCTCGCATCGCCGCTTGCAGCTCGACGCTGCCAACAACGCCGGACCTGTACTGaggaatattcctttaaatgcagTAAAGAGGACACATGCTGCAGAGCATCTGCTTTGGATGTCTCAGTAAGCACCTCAGAGACGCGGCGGACTAACGCTACAACAGTCCAGGACGCCGGCATCACAGACCCCGGGGACACTTCACAGACTACGACACAGCTCATCACGATTcagcaaaaaacacaaagagatgTCCCAAACAACACCGAGACAAGCACTTCGCAGTCTACCCGGCTGCCCCAGACGACTGAACTGAAAATAATGTCCACTGCCGACCCTAGCGAAACGTTTCCAGCAGAAGCAAACAGCACAGCCTATATCACAGATCTGGGACACAGAGGACAAGACACGGCAACCAATCCAGGGCTGGTGGCAGTGCTGTGTATTTTCTGCATTGTGGTGGCTGTAGTCGCCGTGGTTGTGATAGTGAAGGCTGCTCGCTCCAGAAAGCCACAGTTTGAGCGGCTCGATGACGTACCAATGggcAAGGTAAATGAGGATGCACCATTCGCCCGCTACCCTCCAAAATAAATTGCAGTCTCAGTGAACTACAGATCTATGCCTCTgatatattgctttttttttttttttttgtctgtttgttttgtaattaaatgtgtCTGTTTAGAACATAAACTTGAAGTGCAATACCTAGTGTATTAGTTAGAGAACATGGTAATGTTGTAacttattttttccccctcacaaTAGCGCAAACAGTGTCAAATCTACAGTCAAATGTAAATGAGGATAAATGAACTGGAGGCCACTTTTGTCATGATTTGCACTGTCAATATTGTTGGAAACTATAACGGGGTTGTGGCATTTGTAGCTTGTCCTCCAGATGGCGACAAAATTATTTGCAAGCAGTGAACAATTCTACAGCTGTACTGTAAACCAACCTAAATTATGCAATAAATCACcgtaaaatagtaa

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043251640.1 True 1209 mRNA 0.47 6 13777335 13790405

Neighbor

gene id symbol gene type direction distance location
LOC122353909 LOC107680549,LOC107597153,LOC107757943,LOC107685118 coding upstream 128645 13638952 ~ 13648690 (+)
LOC122353911 zgc:162969,LOC107680475,LOC107747135,LOC107597149,LOC107757941 coding upstream 173259 13601397 ~ 13604076 (+)
ctns LOC107680482,LOC107747199,LOC107597154,LOC107757929,LOC107685310,LOC107553535 coding upstream 376733 13396218 ~ 13400602 (+)
slc1a6 slc1a6,LOC107747749,LOC107685347,LOC107757933,LOC107553532,LOC108437295 coding upstream 412311 13348175 ~ 13365024 (+)
tax1bp3 tax1bp3,LOC107685157,LOC107747253,LOC107680510 coding upstream 426003 13347122 ~ 13351332 (+)
pde4cb crtc1b,LOC107747102,LOC107680520,LOC107757940,LOC107665846,LOC107553556 coding downstream 1434 13791839 ~ 13844867 (+)
rab3ab rab3a,rab3ab,LOC107553558,LOC107680521,LOC107665838,LOC107597148 coding downstream 55562 13845967 ~ 13858928 (+)
klhl26 klhl26,LOC107680559,LOC107597147,LOC107747058,LOC107553559,LOC107665842 coding downstream 77041 13867446 ~ 13875508 (+)
LOC122354272 crtc1,LOC107747695,LOC107665843,LOC107553560,LOC107597189 coding downstream 86045 13876450 ~ 13886965 (+)
LOC122353757 NA coding downstream 447701 14238106 ~ 14239596 (+)
G81699 NA non-coding upstream 869 13776170 ~ 13776466 (+)
G81484 NA non-coding upstream 35224 13702878 ~ 13742111 (+)
G81468 LOC107747585,LOC107680549,LOC107597153,LOC107757943 non-coding upstream 126317 13406678 ~ 13651018 (+)
G81479 NA non-coding upstream 164660 13610603 ~ 13612675 (+)
G81470 NA non-coding upstream 319380 13457156 ~ 13457955 (+)
G81711 NA non-coding downstream 70566 13860971 ~ 13861490 (+)
G81724 NA non-coding downstream 335427 14125832 ~ 14133969 (+)
G81726 comp,LOC107733073,LOC107665851,LOC107680551,LOC107747026 non-coding downstream 477200 14267605 ~ 14309847 (+)
G81732 NA non-coding downstream 580901 14371306 ~ 14372370 (+)
G81749 NA non-coding downstream 659625 14450030 ~ 14450234 (+)
LOC122353915 vmac,LOC107680554,LOC107685109,LOC107757942 other upstream 72360 13701235 ~ 13704975 (+)
LOC122353908 vmac,LOC107680554,LOC107757942,LOC107685109 other upstream 311919 13460464 ~ 13465416 (+)
ranbp3a LOC107597153,LOC107680549,LOC107757943,LOC107685118 other upstream 367209 13402287 ~ 13410126 (+)
LOC122354403 LOC107747219,LOC107747210,LOC107680505,LOC107757944,LOC107597155,LOC559131,LOC107580225,LOC107685131 other upstream 393492 13374021 ~ 13383843 (+)
G81434 NA other upstream 546243 13228943 ~ 13231092 (+)
G81717 NA other downstream 96928 13887333 ~ 14306577 (+)
G81722 NA other downstream 231385 14021790 ~ 14030101 (+)
LOC122353763 NA other downstream 561895 14352300 ~ 14354705 (+)
ptgfr ptgfr,LOC107753832,LOC107562064,LOC107655972,LOC107665835 other downstream 675487 14465892 ~ 14468603 (+)
zfyve9b zfyve9b,LOC107753830,LOC107656105,LOC107562066,LOC107723065,LOC107665831 other downstream 682161 14472566 ~ 14488809 (+)

Expression


Co-expression Network