CI01000000_16971818_16978284


Basic Information

Item Value
gene id CI01000000_16971818_16978284
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000000
NCBI id null
chromosome length 19091038
location 16971499 ~ 16978681 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000000_16971818_16978284.mRNA
TTATATATAGATGGCTGGTATCTATTTCAGAGCATGCACATAAACCTGCATGCAGTGTCAAGGAGAGAACCATGGCTCATAGTAAGTGGCACTCTGCCGTAGGTCTTTGCCTCAGATAAAGAACCACCAATTCTCCCTTCGACTGCACCAATAACTGAGTGTGCATCTCCAAGACTAAATATGGGAAAAAAATTTCCACTGCAGTGGTCCAGTGGTTGCTCTCCAGCTGTCCCCTTAGGAGAATGTTCCAATGCAGCGAAGTGAAAAAAGGCGAGAGAGTTAAACATTAGTTCCTGAATTCCACCAGGCTAAGCACAGCATGGTGGTTATTCAAAGGGGACAAAAGAACAAGGCTAAGAGCATTGGTGCTAAAACACTGTCGTGCAGAATGTCATGGCTACCGCTATTAATCTTGATCTCCAGTTTCTTTCGCCGCTGGCCAAGAAATCAAGCTGCATTCTTACAAGGTGAATTGGCAATTTCACTATCCACACCCCTTTGGAGTTGCAAGGTTAATCGGTTTCCCAAAGGCTTTCCAAATCCTGTACTGTACTACACAGGATACTCTTTATCTGACAGTTCTGACCTGGAGAGCCCAAAGTGGGACATCACCTACCAAAATTCTGCTGATGCTCGCAAAGCAACGAGGGCAAACTCAGTGCAAGGACACTATGTGCTCTGTCGTGCGGCAGCCAGATCTGCATTACCTGTCCTTCCGCCGTCTGGAGGCCGTTGTGCCATTGTCGATGGCGATCGACCTGCATTCGTTTATTTTCAGTGGCTGCGACTGACATTTGGGTGCTTTTCATTACCGAGAGATGCGCTCCCAAAGGCTTGCGGCACCCCAGACGCCTGGGGGAAGGGAAGGAGAGGAGGGCTACCTAACCCATCTTTACCTCAGACGACACTTCCACCGAGGAGGAAGTGAACGCAGCATAGAATGCAATGCAATGCAATGAATGTATAAAAACAAAGTGGATGGATTTAAGCATGCTTATTTGGCTTACTTTGCAAAGTGGGTAAAGGGTCAAGAAGAATCAATCAAAATAGAAGTTGTAAAGGAAGATTAACCAAATATGAGGAGATAACCAGCGCTTAGTGGTTAAGCTCTGGCAGTTCACAGGGTTAGGAGTGCTAGGTATTACGCTAGTCTTTGCCTAACTTGGCCTCTTCAGTGCTGTCATCCTCTCTGAGTAGGTGCAAAATGACTCTTAAATCGTTTTAAAAATTCCTTTTAGACCATTACTACAAGAGGCTAAAGGTTAAGTACAATCATTAATCTAGTAAAAAAAAACACACTCCTGTCTGCAAAAGCAAACTATCTA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000000_16971818_16978284.mRNA True 1325 mRNA 0.45 4 16971499 16978681

Neighbor

gene id symbol gene type direction distance location
CI01000000_16922072_16941848 PDE6B, PDE6A coding upstream 29235 16922032 ~ 16942264 (+)
CI01000000_16919833_16920038 TMEM216 coding upstream 51424 16919833 ~ 16920075 (+)
CI01000000_16903722_16914680 NA coding upstream 56420 16903722 ~ 16915079 (+)
CI01000000_16894331_16900440 NA coding upstream 71056 16894235 ~ 16900443 (+)
CI01000000_16878307_16893681 MATR3L1.2 coding upstream 77438 16878211 ~ 16894061 (+)
CI01000000_17095875_17098978 NA coding downstream 117123 17095804 ~ 17098978 (+)
CI01000000_17226578_17228246 NA coding downstream 247897 17226578 ~ 17228309 (+)
CI01000000_17228916_17261506 NA coding downstream 250064 17228745 ~ 17261638 (+)
CI01000000_17267180_17298324 SLIT3 coding downstream 288499 17267180 ~ 17298324 (+)
CI01000000_17339270_17345013 CXCL14, CXL14 coding downstream 360589 17339154 ~ 17346200 (+)
G10934 NA non-coding upstream 49938 16921292 ~ 16921561 (+)
G10937 NA non-coding upstream 68893 16901930 ~ 16902606 (+)
G10968 NA non-coding upstream 234252 16737032 ~ 16737247 (+)
G10956 NA non-coding upstream 279949 16691262 ~ 16691550 (+)
G10912 NA non-coding upstream 344191 16626953 ~ 16627308 (+)
G11019 NA non-coding downstream 17958 16996639 ~ 16996931 (+)
G11028 NA non-coding downstream 25721 17004402 ~ 17004656 (+)
G11039 NA non-coding downstream 36659 17015340 ~ 17015573 (+)
G11012 NA non-coding downstream 53895 17032576 ~ 17034843 (+)
G11053 NA non-coding downstream 77230 17055911 ~ 17056150 (+)
G10201 NA other upstream 1040937 15930266 ~ 15930562 (+)
G9201 NA other upstream 2736558 14215024 ~ 14234941 (+)
G7522 NA other upstream 4792491 12178369 ~ 12179008 (+)
G7514 NA other upstream 4834491 12136522 ~ 12137008 (+)
G7153 NA other upstream 5725866 11244457 ~ 11245633 (+)
G11465 NA other downstream 905272 17883953 ~ 17887462 (+)
G11521 NA other downstream 1054058 18032739 ~ 18164112 (+)
G11801 NA other downstream 1702186 18674116 ~ 18745376 (+)

Expression


Co-expression Network