mfn1b (mfn1b,LOC107661155,LOC107701405,LOC107706807,LOC107552408,LOC108443893,LOC108270971)


Basic Information

Item Value
gene id mfn1b
gene name mfn1b,LOC107661155,LOC107701405,LOC107706807,LOC107552408,LOC108443893,LOC108270971
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056709.1
NCBI id CM032078.1
chromosome length 24513629
location 11795535 ~ 11811706 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043251733.1
GCGTTTccgggacttttattttgaagtggtCGAGATTGAGCGTCTGCAGCGAGTGTGTTTGTCATGACAGGAGAGGATTTAACGTTCCCGTGATCAGGTGTTGAAATGGACCGGTCCGATCCTTCTCCGCTGAAGCGCTTCGTTCAGGCCAAAAAGAAGATCGGCGAGGTTTTCGAGCAGCTCCTGGTTTACGTTCAGGAGGGGACGGAGTTTGTAAAAGAAACCTGCAATAATGAGTCGCTGGAGAACATCGCCAACGAGCCCCAGCTGGATCAGATCCAGGCTTACATGAGCAAGCTCTCCGAAATTAAAGAGGTTTTAGCTCGCAATTACATGAAGGTGGCCTTTTTCGGCAGAACAAGCAACGGAAAAAGCACGGTGGTCAACGCCATGCTGCGGGACCGAGTGCTGCCCAGCGGCATCGGCCACACCACCAACTGCTTCCTGAGCGTGGAGGGGACCGACGAAGACAAGGCCTTCCTCAAGACCGAAGGCTCCGAGGAGGAGAAGAGCATCAAGACGGTGAATCAGTTGGCTCACGCACTACATATGGACGAGAGTCTGGACGCCGGGTGTCTGGTCAAAGTGTTCTGGCCCAAAACGAAGTGTGCTCTGCTCAGAGACGACCTGGTTCTGGTGGATAGTCCTGGCACGGACGTCACCACGCAGCTGGACAGCTGGATCGATAAGTTCTGTCTGGACGCGGATGTGTTTGTGCTGGTGGCCAACTCCGAATCTACTCTCATGAACACGgagAAGCACTTCTTCCACAAGGTCAATGAACGCCTGTCAAAGCCCAACATCTTCATCCTGAACAACCGCTGGGACGCTTCTGCCGCTGAACCCGAGTACATGGAGGACGTGAGGAAGCAGCACACGGACAGGTGCGTGAACTTCCTGGTGGAGGAGCTGAAGGTGGTGGATCGCGCTCAAGCCCCGAACCGGATCTTCTTCGTCTCGGCGAAGGAGGTGCTGAACTCCCGGATGCAGCGGGCGCAGGGTATGCCAGAGACGGgAGGAGCTTTAGCTGAAGGCTTTCAGGAGCGACTGAAGGAGTTCCAGAACTTTGAGAGATCCTTTGAGGAGTGTATCTCGCATTCAGCAGTGAAAACAAAGTTTGAGCATCACACAATCAGAGCAAAGCAGATCACAGAAACGGTCAAAGACATCATGGATCACATCAACATCGCCGCCGCGGAGAAGAGGGTGGTTTCTCTGGAAAAGAGGGAGTATCTGATCGACCGGCTGGATTTCGTTCGCAATCAACTCAACCTGCTCATCCAGGACATCAAGAAGAAGATCGAGGCCATCACAGAAGAGGTCAAAGACAAGGTGTCAGACGCGATGGCAGAAGAGATCTGTCGTCTGTCTGTGCTCATAGACGAGTTTCATGCAGATTTCCATCCGTCACCACACGTGCTCAAAATCTACAAATCTGATCTTCTGACCCACATCGAGAAGGGCATGGGCAAGAATCTGGCCTTCCGCTGTTCTGATGCAGTGAACGCCTCCGTTCAGTCGTCTCAGCAAGACATGATGGAGTGTCTGAAGCctctgctgccctctgctgcccAGAGCCAGCTCCACATGCTCATTCCCAGCAGGAAGTTTGAGCTCAGCTACGACCTCAACTGTGCCACGCTCTGCTCAGACTTCCAGGAGAACATCGAGTTCCAGTTCTCTTTGGGCTGGACTGCGCTGGTCCACCGCTTCCTAGGTCCAGTCAACGCCAAACGCGCCTTGATGCTTGTGGATCAGACTCTACCGCTGACGGCGCCGACCACCCCTTCGGCCCCAGCGGTGGTTCAGTCTCAGGTTCCTAGAGCTCAAGGTCAGAATCAGCACTCACAGACACAGGAAGAGCTCATGATGTCCGTGGTGAGCAACCTGGCCTCGGTCACCTCCCGCACGTCTATGAGCGTGATCATCGTTGGAGGAGTGGTGTGGAGAACCGTTGGCTGGCGTCTGATCGCTCTCTCCATGAGTCTGTACGGCACACTCTACCTGTACGAAAGACTCACCTGGACCACCAAGGCCAAGGAAAGAACCCTGAAGAAACAGTTTGTGGATTACGCCACCGAGAAACTTCAAATGATCATCAGTTTCACCAGCTCAAACTGCAGCCACCAAGTACAGCAAGAAATCGCGAGTACATTCGCTCGACTCTGCCAGCAAGTGGACATCACCCAGAAGGACCTGGAGAAGGACATCCAGCGCCTCACCGACAAGATCCAGAAGCTGGAAACCGTACAGAACCGATCCAAAGCGCTCAGACATAAAGCCACGGCTCTGGAAAAGCAGTTGGAGGATTTCAGCTCCCAGTATCTTCGTCATCAACCCTGACTCGGACACTCGGCTCCTTCCAGAGAGTGACGTAACTCCTGAAATACTGTACACTCTCCCGTTACGCCCTGCTGTTTTGGGAATTCTCGACTCGCCAGATGTTGCGAGGAATGCAAGGGGAAAAAATGTTACTTGTAAAATTGGGATTCTTGAACGAAAGCTGGTTTCAGTGCTATGTTTTGGTCGAGGTTTTTCTGTACAGAGATCGTCACttgaacttaatttaaaaaaacaaaacaaaacactacttTGTGAACTGTGAAACTGCCCTGctaagtaaaacaaaaagctgGAATTTGAAAATGGAGTTCGTTTTGCTTGTCAGGTTCAGCCTAATGAAGGAGTCAAACTTTATTTACTAATAGCCAGCCTTTTTCACAGAGcctttttattcagaaacagTTTCCCGTCAACAGACAGGTAATTCAAATTTTGTAGGTTTGCCTTTTGATCACAAAGCCTATTTTATATGTGTTCCTTGGTAGCTGTTTGAATCAATATAACCCAGTGTTAAAATTCTTTTCATGAACTGTTATTTCTAAAcgtatgtaaatgtaataaccTGAAAATAAGTTTCTcctgtgtaataaaaatgaaaatataataaaaa

Function

symbol description
mfn1b Predicted to enable GTPase activity. Predicted to be involved in mitochondrial fusion and mitochondrion localization. Predicted to be located in mitochondrial outer membrane. Predicted to be integral component of membrane. Predicted to be intrinsic component of mitochondrial outer membrane. Orthologous to human MFN1 (mitofusin 1).

NR:

description
PREDICTED: mitofusin-1

GO:

id name namespace
GO:0006184 obsolete GTP catabolic process biological_process
GO:0008053 mitochondrial fusion biological_process
GO:0016021 integral component of membrane cellular_component
GO:0005741 mitochondrial outer membrane cellular_component
GO:0003924 GTPase activity molecular_function
GO:0005525 GTP binding molecular_function

KEGG:

id description
K21356 MFN1; mitofusin 1

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043251733.1 True 2953 mRNA 0.50 18 11795535 11811706

Neighbor

gene id symbol gene type direction distance location
si:ch1073-365p7.2 NA coding upstream 1438 11782659 ~ 11794097 (+)
tbce LOC107715672,LOC107661157,LOC107713241,LOC107574186,LOC107701315,LOC107740075,LOC107564754 coding upstream 80184 11706108 ~ 11715351 (+)
map1lc3c map1lc3c,LOC107701141,LOC107702025 coding upstream 195837 11597790 ~ 11599698 (+)
opn6a LOC107740064,LOC107567633,LOC107702020 coding upstream 247822 11539678 ~ 11547713 (+)
LOC122354143 pfklb,pfkl,LOC108444469 coding upstream 271877 11512333 ~ 11523658 (+)
clcn4 clcn4,LOC107552404,LOC107705120,LOC107558374,LOC108443897,LOC103025096 coding downstream 58719 11870425 ~ 11883430 (+)
LOC122353838 LOC108444238,LOC108271228 coding downstream 81642 11893348 ~ 11955071 (+)
LOC122353874 ralbb,ralba,LOC107558370,LOC107657963,LOC107713003,LOC107552396,LOC107741991,LOC107597482,LOC107746258 coding downstream 350372 12162078 ~ 12166342 (+)
acyp2 acyp2,LOC107712999,LOC107744585 coding downstream 535949 12347655 ~ 12364409 (+)
sptbn1 sptbn1,LOC108442064,LOC108270927 coding downstream 563407 12375113 ~ 12466443 (+)
G80889 NA non-coding upstream 20413 11774726 ~ 11775122 (+)
G80847 NA non-coding upstream 29481 11736372 ~ 11766054 (+)
LOC122353893 LOC107558369,LOC107703026,LOC101884293 non-coding upstream 30595 11761357 ~ 11764940 (+)
G80865 NA non-coding upstream 101082 11690440 ~ 11694453 (+)
G80861 NA non-coding upstream 111591 11683460 ~ 11683944 (+)
G81234 NA non-coding downstream 423486 12235192 ~ 12236177 (+)
G81236 NA non-coding downstream 426112 12237818 ~ 12238356 (+)
G81238 NA non-coding downstream 426764 12238470 ~ 12239245 (+)
G81240 NA non-coding downstream 427825 12239531 ~ 12239751 (+)
G81241 NA non-coding downstream 428427 12240133 ~ 12240391 (+)
tomm20b tomm20b,tomm20,LOC107740066,LOC107701232,LOC107661159,LOC107713233 other upstream 95321 11698324 ~ 11700214 (+)
LOC122354243 irf2bp2b,LOC107713243,LOC107564749,LOC107567632,LOC107683260,LOC107740065 other upstream 122578 11580026 ~ 11672957 (+)
eif4a3 eif4a3,LOC107702040 other upstream 260421 11528719 ~ 11535114 (+)
rpl37a rpl37a,RPL37A,zgc:171772,LOC107564751,LOC107567628 other upstream 268493 11525023 ~ 11527042 (+)
LOC122354145 pfkl,pfklb,LOC107564579,LOC108444469 other upstream 287764 11505653 ~ 11507771 (+)
shroom2b LOC107661152,LOC107552394,LOC107740069,LOC107705119,LOC107558375,LOC107702184 other downstream 16172 11827878 ~ 11857319 (+)
LOC122353892 LOC107565225,LOC107684241,LOC107713230,LOC107702019,LOC107564758,LOC107753360,LOC107576527 other downstream 48953 11860659 ~ 11868523 (+)
G81213 LOC107741992,LOC107680499,LOC107657964,LOC108442067,LOC108271057,LOC107574809 other downstream 381048 12192754 ~ 12225492 (+)
LOC122353844 LOC107747562,LOC107680562,LOC107597180,LOC107712997,LOC107657970,LOC107557419 other downstream 719620 12531326 ~ 12535426 (+)
G81268 NA other downstream 771209 12582915 ~ 12585641 (+)

Expression


Co-expression Network