si:ch1073-365p7.2


Basic Information

Item Value
gene id si:ch1073-365p7.2
gene name NA
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056709.1
NCBI id CM032078.1
chromosome length 24513629
location 11782659 ~ 11794097 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043251737.1
gaacatgTAGTTGAAGTAAACTGTGTTCATCCTGGTGTCAGTCTGGAAGATTTGTATATTCgcttaaatgtgattttatagattttttgggggttttgcagagttttttaattgtagtttgatTCTCTTTCCTTACTTTTGCATGGTATTTTGgataacaaaacagaaacatatgCAAGAACGATGGTTGAAGAGTTGAGAGCAGTTCTGATTGGAAGGCATCACTCTGGAAAAACATCGGTGATTAACACTATTTTAGATACCAGTGAAACAGAAGCTGAAGGAGATGATCATATTAAGAGAGAGGGGTTTATTGAGGGAAAGAAAGTCAGTCTGGTTGAAACTCCTGGCTGGTGGAAAACCTTCAATCCGAGAGATTTATCCAACATCTCCAAACAGCAGCTGCTTCTCAGGATTTCTCTGATTTCTCCCGGACCTCACGTGGTTCTGATCGTGATTCGGGCCGATTCTGCGTTCACTGACCCTGATGAGAGGTTTCTGAAGGAGCATGAGGAGCTTCTGGGTCCCAGTGTCTGGACTCACTCCCTCGTCATCTTCACAAGAGGAGATTTAATTCAACGAGAAGAGATAGAGCGGCGTATTCGAGAAGACGGGTCGGCTCTCAAGCGGGTCATTGAGAGATGCGGaaataaatatcttgtttttaacaattcaaacCATCACGACCGAACCCAAGTTAAGGAGCTGTTTAAGAAAACTGAAGGAGTTGTTGGGAAGAATAACGGCAAGCTTTTTAACATCGACCTGGAAAAAGTAAAGGACGTCAATGAGCAGTGGGAGGAAATTCAGACCAGAGCGAATTCTAGAAAATCCAGAGTACAGGAGGAACGCTCGATACTTCAAGAGAAAGcaCATGTGCATGGTCTTGAAGAGATCAGAGTTGTTTTGCTGGGATGGGTGTTTTGTGGAAAGAGTTCAGCCGGAAACATCATCTTGAACCAGGATGAATTTGCCACAGGAGGAAGAACCAGAGAATGCTCGAGAGGGTTTGGAGATGTAGACGGAAGGAAGATGACGGTGTTGGACACTCCAGGCTGGTGGAAGTACTTTGCATCTGAATTTAACCCCGATTTCATTAGATCTGCGATCTTAGAAAGCGTTTCAGAGTGTAAGAAGCTCCCTCACGCCATGCTGCTCGTGATTCCTGCAGATACATCatttcaggaagaacaaaagagaATCACTGAGCAAAATATGTCCATCCTGGGAGACGGCGTCTGGAGACACACCATCGTTTTGTTCACGTGGGGCGACCGATTCAAAGACATCTCCATCGAGCAGCACATCGAGGCTGAAGGAGAAGCTCTCCGGTGGCTGATTGAGAAATGCAGGAACAGATATCACGTCTTCAACAACGCGGACAAGAAGAATCGAGATCAAGTCACAGAGCTGGTCCAGAAGATCGAGGAGATGGTGGCAGAAAACTGCTCGTTTCGCCTCAATGCACCGAAAATCTGCGACGAGAAAAGCTGTCTGAGAAACGACAAACAGGAGGATCTCGATATGAAGATCAAGCTGAAGGATGTCTGCCACTTTCTGGACGAGGGCTTTAAGAGAGAAGCTGGAGAGATAAGAGGGAAGATAGAAAAGCTATGCATGGATATCTTGGATGTACAGCTAAACCTTCAGGACTCTTGGAGTATGGATGATCCTATTGACTTAGCCCGAGACGATTCCCGTAGACCACTAAAAGCGATCCGTGCACCTCAACAAGACACCACCTCTAATCCGATTAATGCTCTTCTTGTGAGAGAGTTCAGCAGATGGGAAAGTATCATCATAGACGGTGTTCAGGAAAGCCTGCAGGACATCAAATCATCCATTGAGCTCTCTCAGGCTGAGAAGAGGCAGAAGACAGAGGATGCTGTTGAGAGATGGCTACAGAACTGCTACCACTATGTTGAACATACTATTGATAAAATACGAGATCCAGAAACAGCGATCAGGagaaaaagactaaaaatacaATGATTACTGAATAATGtactgtttgtctgtgtgtgtgtgtatatatatatatatatatatatatatatatatatatatatatgtatacacacaatGCATGATGTTATTTAATTAGGATTTTATATGTCCCTGAATCACTTCACATGAGTTATAGACGTTGCagctgtattttgtgttttgcttgAGAACAAGTTTACAGTCATCTTCTCTCTGTTGAGTCCACAAATGAAGGACAGTGTTTATAAACGGGCCACGAAAAGTAAGCAAATCTTTTGAAGCGCAAGGAGAAAATTCAAAGTGAAGCAGCGGCGAGCTGGTTGAGGAAACTTAAAAGGCGTAAGTTGAGGAAACTTAAAAGGCGTAAGTTGAGGAAACTTAAAAGGCGTAAGTTGAGGAAACTTAAAAAGGCGTAAGTTGAGGAAACTTAAAAGGCGTAAGTTGAGGAAACTTAAAAGGCGTAAGTTGAGGAAACTTAAAAAGCGTAAGTTGAGGAAACTTAAAAGGCGTAAGTTGAGGAAACTTAAAAGGCGTAAGTTGAGGAAACTTAAAAAGCGTAAGTTGAGGAAACT
>XM_043251738.1
gaacatgTAGTTGAAGTAAACTGTGTTCATCCTGGTGTCAGTCTGGAAGATTTGTATATTCgcttaaatgtgattttatagattttttgggggttttgcagagttttttaattgtagtttgatTCTCTTTCCTTACTTTTGCATGGTATTTTGgataacaaaacagaaacatatgCAAGAACGATGGTTGAAGAGTTGAGAGCAGTTCTGATTGGAAGGCATCACTCTGGAAAAACATCGGTGATTAACACTATTTTAGATACCAGTGAAACAGAAGCTGAAGGAGATGATCATATTAAGAGAGAGGGGTTTATTGAGGGAAAGAAAGTCAGTCTGGTTGAAACTCCTGGCTGGTGGAAAACCTTCAATCCGAGAGATTTATCCAACATCTCCAAACAGCAGCTGCTTCTCAGGATTTCTCTGATTTCTCCCGGACCTCACGTGGTTCTGATCGTGATTCGGGCCGATTCTGCGTTCACTGACCCTGATGAGAGGTTTCTGAAGGAGCATGAGGAGCTTCTGGGTCCCAGTGTCTGGACTCACTCCCTCGTCATCTTCACAAGAGGAGATTTAATTCAACGAGAAGAGATAGAGCGGCGTATTCGAGAAGACGGGTCGGCTCTCAAGCGGGTCATTGAGAGATGCGGaaataaatatcttgtttttaacaattcaaacCATCACGACCGAACCCAAGTTAAGGAGCTGTTTAAGAAAACTGAAGGAGTTGTTGGGAAGAATAACGGCAAGCTTTTTAACATCGACCTGGAAAAAGTAAAGGACGTCAATGAGCAGTGGGAGGAAATTCAGACCAGAGCGAATTCTAGAAAATCCAGAGTACAGGAGGAACGCTCGATACTTCAAGAGAAAGcaCATGTGCATGGTCTTGAAGAGATCAGAGTTGTTTTGCTGGGATGGGTGTTTTGTGGAAAGAGTTCAGCCGGAAACATCATCTTGAACCAGGATGAATTTGCCACAGGAGGAAGAACCAGAGAATGCTCGAGAGGGTTTGGAGATGTAGACGGAAGGAAGATGACGGTGTTGGACACTCCAGGCTGGTGGAAGTACTTTGCATCTGAATTTAACCCCGATTTCATTAGATCTGCGATCTTAGAAAGCGTTTCAGAGTGTAAGAAGCTCCCTCACGCCATGCTGCTCGTGATTCCTGCAGATACATCatttcaggaagaacaaaagagaATCACTGAGCAAAATATGTCCATCCTGGGAGACGGCGTCTGGAGACACACCATCGTTTTGTTCACGTGGGGCGACCGATTCAAAGACATCTCCATCGAGCAGCACATCGAGGCTGAAGGAGAAGCTCTCCGGTGGCTGATTGAGAAATGCAGGAACAGATATCACGTCTTCAACAACGCGGACAAGAAGAATCGAGATCAAGTCACAGAGCTGGTCCAGAAGATCGAGGAGATGGTGGCAGAAAACTGCTTGTTTCATCTCgagaaaaggaaaaactgtGATGCCAACAACGACACAGAGGAGGATCTGAATATGGAGATCAGACTGAAGGATGTCTGCCACTTTCTTGAGAAggggtttaaaataaaagctgaagaGATGAAAAAGAAGATACAAAACCTATGCGTGCATATCATGGAGGAATGTCTAAACCTTGACGAGTCTAGTATGACTTATCATCTTAACTTTGCAGATGAAGGTCAACCTCCTGATGACCAATTAGATGTCACGTGTACGCTTCAACAGGAAAGCAttccTGAGCCAATGAATACTCTTCTGGAGAGAGAGTTCAGCAGATGGGAAAGTATCATCATAGACGGTGTTCAAGAAAGTCTGCAGGACATTAAATCCTCATTTGAGCTCTCTCAGGCTGAGAAGAAGCAAAAGTCAAAGGATGCTGTTGAGAGATGGCTACAGAACTACAATCATTATGTTGAACATACTATTGATAAAATGCAAAATCCAGAATCTGCGATCAGGAGAAGAGACTGAAGAAATATTCACATTTCGGACTCAGTTGACTATTTGCTTAAATAGAAGGGCACCttgtgtaaatatgttttaatgcacCCGCCCTTTGTGTTTGGTCATGCCAAGAGCTGAATACAGCTTGGGTAACATACTGACAATCAGattcatatttatcatttactcactcagTAACCAGCTCTCATGTGCCTTTGAGTACCAATAAACTCATCCGAGCC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043251737.1 True 2558 mRNA 0.42 7 11782659 11794097
XM_043251738.1 False 2186 mRNA 0.43 6 11782659 11786717

Neighbor

gene id symbol gene type direction distance location
tbce LOC107715672,LOC107661157,LOC107713241,LOC107574186,LOC107701315,LOC107740075,LOC107564754 coding upstream 67308 11706108 ~ 11715351 (+)
map1lc3c map1lc3c,LOC107701141,LOC107702025 coding upstream 182961 11597790 ~ 11599698 (+)
opn6a LOC107740064,LOC107567633,LOC107702020 coding upstream 234946 11539678 ~ 11547713 (+)
LOC122354143 pfklb,pfkl,LOC108444469 coding upstream 259001 11512333 ~ 11523658 (+)
orc2 orc2,LOC107702034,LOC107702742,LOC107564576,LOC107740071,LOC107564577 coding upstream 282737 11486516 ~ 11499922 (+)
mfn1b mfn1b,LOC107661155,LOC107701405,LOC107706807,LOC107552408,LOC108443893,LOC108270971 coding downstream 1438 11795535 ~ 11811706 (+)
clcn4 clcn4,LOC107552404,LOC107705120,LOC107558374,LOC108443897,LOC103025096 coding downstream 76328 11870425 ~ 11883430 (+)
LOC122353838 LOC108444238,LOC108271228 coding downstream 99251 11893348 ~ 11955071 (+)
LOC122353874 ralbb,ralba,LOC107558370,LOC107657963,LOC107713003,LOC107552396,LOC107741991,LOC107597482,LOC107746258 coding downstream 367981 12162078 ~ 12166342 (+)
acyp2 acyp2,LOC107712999,LOC107744585 coding downstream 553558 12347655 ~ 12364409 (+)
G80889 NA non-coding upstream 7537 11774726 ~ 11775122 (+)
G80847 NA non-coding upstream 16605 11736372 ~ 11766054 (+)
LOC122353893 LOC107558369,LOC107703026,LOC101884293 non-coding upstream 17719 11761357 ~ 11764940 (+)
G80865 NA non-coding upstream 88206 11690440 ~ 11694453 (+)
G80861 NA non-coding upstream 98715 11683460 ~ 11683944 (+)
G81234 NA non-coding downstream 441095 12235192 ~ 12236177 (+)
G81236 NA non-coding downstream 443721 12237818 ~ 12238356 (+)
G81238 NA non-coding downstream 444373 12238470 ~ 12239245 (+)
G81240 NA non-coding downstream 445434 12239531 ~ 12239751 (+)
G81241 NA non-coding downstream 446036 12240133 ~ 12240391 (+)
tomm20b tomm20b,tomm20,LOC107740066,LOC107701232,LOC107661159,LOC107713233 other upstream 82445 11698324 ~ 11700214 (+)
LOC122354243 irf2bp2b,LOC107713243,LOC107564749,LOC107567632,LOC107683260,LOC107740065 other upstream 109702 11580026 ~ 11672957 (+)
eif4a3 eif4a3,LOC107702040 other upstream 247545 11528719 ~ 11535114 (+)
rpl37a rpl37a,RPL37A,zgc:171772,LOC107564751,LOC107567628 other upstream 255617 11525023 ~ 11527042 (+)
LOC122354145 pfkl,pfklb,LOC107564579,LOC108444469 other upstream 274888 11505653 ~ 11507771 (+)
shroom2b LOC107661152,LOC107552394,LOC107740069,LOC107705119,LOC107558375,LOC107702184 other downstream 33781 11827878 ~ 11857319 (+)
LOC122353892 LOC107565225,LOC107684241,LOC107713230,LOC107702019,LOC107564758,LOC107753360,LOC107576527 other downstream 66562 11860659 ~ 11868523 (+)
G81213 LOC107741992,LOC107680499,LOC107657964,LOC108442067,LOC108271057,LOC107574809 other downstream 398657 12192754 ~ 12225492 (+)
LOC122353844 LOC107747562,LOC107680562,LOC107597180,LOC107712997,LOC107657970,LOC107557419 other downstream 737229 12531326 ~ 12535426 (+)
G81268 NA other downstream 788818 12582915 ~ 12585641 (+)

Expression


Co-expression Network