LOC122353868


Basic Information

Item Value
gene id LOC122353868
gene name NA
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056709.1
NCBI id CM032078.1
chromosome length 24513629
location 12738000 ~ 12744145 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043251759.1
TGAAACTGAAGAAAAAGTATAAAACGGGCGTCGTGGTACGAGTCTCAACGCCGGTCTTCAGAGAAACGaaaagcatgaaaaagaACGTTAAAAGAAAAGCTCGACCTCGACCTCAACCTCAATGTCGTGCACGAGTGGAAAACCAAGAGCTGGACAGCCCATGGAGGACCTTTAATTGGTTTAAGAAACAAGAACTGAAAAGGATGCTAGAAAACTTCACTGTGGATAATCCAGACGTAAAGGACATCAAGGTCCTGGTAGCTGGGCAAATTGGGGCGGGAAAGTCCAGCTTCATTAATTCCGTCAACAATGCCTTTGAAGGACGGATCACTTCTAGAGCGCTGGTTAATTCATCTGCTGGAGCCAGCAATAGTTTCACACAAGAACTCCAAGGATACGCCATCAGAAGTGGGAGAAAAAAACTTCCCTTCGTCTTCAAGGACATCATGGGTCTGGAACCCGGAGTATTGGCCGGGTCGCAAACCGAAGACATCATCAGCGCCGTGTTCGGCCACATCAAGGACGGCTATAAATTCAAGGAGGATCAGGCTCTTGTTCATCGAGGTAACGAGCAGGGCCAGCATTACATCAGTCACCCCGGCCTCTCTGACCAGGCTTTCTGCCTGGTTTACATCATAGACGCTGTGACAGTTAACTTCACAGATGAGAAACTGATTGACAAGTTGAGGATCATCCGCCAGAGAATCAGCGCAAAGGGAATTCCTCAAGTGGTTGTTCTGACGAAAGTGGACGAAGCGTGTCCGTTGGTCAAAAGCAATCTAAGGAAGGTCTACAGAAGCAAGAAGATCAAAGAGAAGATGGAGTTGTGCAGTGCTAAAGTCGGTGTGCCGGTGAGCAACATCTTCCCGGTGAAGAACTACCACGATGAGATCGAAACAAATGATGACGCCGATGTCCTGATACTAAAGGCACTCGAACAGATCGCTCAGATTGCTCATGATAGATTGCTTGATGATGCATGATTGAATTACATGAAACATTCACGAGTTATATCCATTCTGTTATTGTGCATtgttaataattgaataatttatcCTTCGATTCGTTAATTGAACGACGAACCCATTCAGCTTACAGTTTGATTTACCCGTGCttcaaataaaagagaaataaaaaca
>XM_043251760.1
AGAAAAAGTATAAAACGGGCGTCGTGGTACGAGTCTCAACGCCGGTCTTCAGAGAAACGAGCTGGACAGCCCATGGAGGACCTTTAATTGGTTTAAGAAACAAGAACTGAAAAGGATGCTAGAAAACTTCACTGTGGATAATCCAGACGTAAAGGACATCAAGGTCCTGGTAGCTGGGCAAATTGGGGCGGGAAAGTCCAGCTTCATTAATTCCGTCAACAATGCCTTTGAAGGACGGATCACTTCTAGAGCGCTGGTTAATTCATCTGCTGGAGCCAGCAATAGTTTCACACAAGAACTCCAAGGATACGCCATCAGAAGTGGGAGAAAAAAACTTCCCTTCGTCTTCAAGGACATCATGGGTCTGGAACCCGGAGTATTGGCCGGGTCGCAAACCGAAGACATCATCAGCGCCGTGTTCGGCCACATCAAGGACGGCTATAAATTCAAGGAGGATCAGGCTCTTGTTCATCGAGGTAACGAGCAGGGCCAGCATTACATCAGTCACCCCGGCCTCTCTGACCAGGCTTTCTGCCTGGTTTACATCATAGACGCTGTGACAGTTAACTTCACAGATGAGAAACTGATTGACAAGTTGAGGATCATCCGCCAGAGAATCAGCGCAAAGGGAATTCCTCAAGTGGTTGTTCTGACGAAAGTGGACGAAGCGTGTCCGTTGGTCAAAAGCAATCTAAGGAAGGTCTACAGAAGCAAGAAGATCAAAGAGAAGATGGAGTTGTGCAGTGCTAAAGTCGGTGTGCCGGTGAGCAACATCTTCCCGGTGAAGAACTACCACGATGAGATCGAAACAAATGATGACGCCGATGTCCTGATACTAAAGGCACTCGAACAGATCGCTCAGATTGCTCATGATAGATTGCTTGATGATGCATGATTGAATTACATGAAACATTCACGAGTTATATCCATTCTGTTATTGTGCATtgttaataattgaataatttatcCTTCGATTCGTTAATTGAACGACGAACCCATTCAGCTTACAGTTTGATTTACCCGTGCttcaaataaaagagaaataaaaaca

Function

GO:

id name namespace
GO:0005525 GTP binding molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043251759.1 True 1139 mRNA 0.45 8 12738000 12744145
XM_043251760.1 False 1051 mRNA 0.45 7 12738000 12744136

Neighbor

gene id symbol gene type direction distance location
LOC122353875 arf4b,LOC107597172,LOC107557402,LOC107747513,LOC107680530,LOC107712993,LOC107657960 coding downstream 5883 12729331 ~ 12732117 (-)
LOC122353878 zgc:110286,LOC107597171,LOC107747504,LOC107712992,LOC107597172,LOC107557402,LOC107747513 coding downstream 9952 12725774 ~ 12728048 (-)
arf4a arf4a,LOC108431611,LOC107680528,LOC107747489,LOC107597170,LOC108254969,LOC107599973 coding downstream 13392 12719916 ~ 12724608 (-)
rps23 rps23,rs23,LOC107680479,LOC106566095 coding downstream 36346 12700227 ~ 12701654 (-)
asb14a asb14,LOC107680484 coding downstream 42270 12685223 ~ 12695730 (-)
dennd6aa dennd6a,LOC107680547,LOC107657973,LOC107597203,LOC107712949 coding upstream 2961 12747106 ~ 12766666 (-)
slc29a1b slc29a1b,LOC107712971,LOC107741993,LOC107552398,LOC107680494,LOC107557422 coding upstream 223431 12967576 ~ 12981840 (-)
LOC122353867 sult6b1,LOC107680496,LOC107552400,LOC107744587,LOC107713000,LOC107557424,LOC107657965 coding upstream 251102 12995247 ~ 13000126 (-)
gamt gamt,LOC107747770,LOC107597217,LOC107685360,LOC107680536,LOC107553529,LOC107757934 coding upstream 483500 13227645 ~ 13231143 (-)
abhd8b abhd8b,abhd8,LOC107747334,LOC107578087,LOC107680465 coding upstream 512492 13256637 ~ 13261242 (-)
LOC122353897 NA non-coding downstream 22026 12710406 ~ 12715974 (-)
G81353 NA non-coding downstream 162887 12574863 ~ 12575113 (-)
G81350 NA non-coding downstream 169691 12568109 ~ 12568309 (-)
G81349 NA non-coding downstream 202574 12534950 ~ 12535426 (-)
G81330 eml6,LOC107680471,LOC107597181,LOC107747670,LOC107712954 non-coding downstream 244059 12493104 ~ 12493941 (-)
G81514 NA non-coding upstream 123533 12867678 ~ 12870246 (-)
G81522 NA non-coding upstream 144783 12888928 ~ 12890216 (-)
G81524 NA non-coding upstream 149794 12893939 ~ 12895846 (-)
G81528 NA non-coding upstream 221651 12965796 ~ 12998617 (-)
G81540 NA non-coding upstream 303426 13047571 ~ 13048150 (-)
hesx1 hesx1,LOC107712966,LOC107657957,LOC107557393,LOC107680467 other downstream 70412 12663831 ~ 12667588 (-)
G81318 NA other downstream 290713 12445860 ~ 12447287 (-)
G81192 NA other downstream 663925 12073596 ~ 12074075 (-)
ero1b ero1b other downstream 957191 11766831 ~ 11780809 (-)
strn strn,LOC107702041,LOC107701064,LOC108430145,LOC107713228,LOC108271087 other downstream 1106313 11536500 ~ 11631687 (-)
G81512 NA other upstream 73608 12817753 ~ 13057881 (-)
G81523 NA other upstream 146136 12890281 ~ 12896130 (-)
LOC122353859 NA other upstream 212716 12956861 ~ 12965633 (-)
vipb LOC107557425,LOC107657966,LOC107680498,LOC107713001,LOC107741995,LOC107552401 other upstream 240228 12984373 ~ 12989957 (-)
ccl25b LOC107680477 other upstream 605791 13349936 ~ 13394008 (-)

Expression


Co-expression Network