si:ch73-106k19.2 (si:ch73-106k19.2,LOC107712967,LOC107557404,LOC107680468)


Basic Information

Item Value
gene id si:ch73-106k19.2
gene name si:ch73-106k19.2,LOC107712967,LOC107557404,LOC107680468
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056709.1
NCBI id CM032078.1
chromosome length 24513629
location 12609912 ~ 12612530 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043251761.1
atttgacAGAAATGACTGACTTTGGCATGCTCCGTTAACATAAACTGTTCCTTTTGTAATCTGTAACTGAAACGCACCGCTGTGGCGTCTTCCAAAACAACTTCCTTGACTTTGCACCCGGCATGCACACAGTTTTTGTTAACCCTTCGTTGGATTTCCGTgagctcgtgtgtgtgtgtgtgtgtggacaagATGGTCATTCTCGGGGCCGAGGAGCTCAAAGAAGCCGAAAGCGTTTTGAAGCAGAGTTTTCCAGAGTCTATAAAGGTTTACGGCTGTATATTCAACATTAACAGAGGAAAGCCTCACAATCTGGAGGTCATTGCTGACCGGTGGCCAGATTTCATTGTCATTATTTGCAAACCCAAAGTTCagggaaTAAAGGACCGAGAAGGAGACTTTAACATATACAGCATCTACTCAAAGAGCAAAGAGAGCCTGAAAAACTTTCTGGACACACCTGGTGTGATCAATAAACACACGTTCACATTATTAGCAGGGGTTGACATCAGGCATTTAGGAGCAGTTCAGGAGTTTGCGGATCAACATGGACTTCCCTGGAAAACTCAAGGAGTGATGAACGTGTTATTTCTGCAGGATGAGCGACAGCTGCAGTTTAAAGACAGTTATGCTGGATTCAGACTGGCTCCGCTCAGCGCAGCTCATGCTCATCTAGTGAACAGCACGTGGAAGTACGGCGGAGACCGTAACAGCTGTAACTCTGTGCTGAACTACATTACCCACAATCCTTCACTGTGCGTGCTCGAGGACGGCGGCGGCGGCGAGCCCGTCTCCTGGCTGCTTGTGTACAAACACGCCGCTCTCGGTTTGCTCTACACGTTACCACAACACAGACGCAAAGGCTACGCAAAGTTACTGGTGTCTGTGATGGCCAAAAACCTCCTGGGCCTGGGACATCCTGTGTACTGCTTTGTGGAGGAAGAAAATGACCTTTCCAACAAACTTTTCACTTCACTTGGCTTCCAGAATTCACCAGATTACAGGGCTGTGTGGTTTGAGCTGAATAAACGACAATAATtgtttgcttatatatatatatatatatatatatatatatatatatatatatatatatatatatatata

Function

symbol description
si:ch73-106k19.2 Predicted to enable N-acyltransferase activity. Predicted to be located in mitochondrion. Orthologous to several human genes including GLYATL3 (glycine-N-acyltransferase like 3).

NR:

description
PREDICTED: glycine N-acyltransferase-like protein 3 isoform X1

GO: NA

KEGG:

id description
K00628 GLYAT; glycine N-acyltransferase / glycine N-benzoyltransferase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043251761.1 True 1107 mRNA 0.45 5 12609912 12612530

Neighbor

gene id symbol gene type direction distance location
LOC122353873 NA coding upstream 7072 12601083 ~ 12602840 (+)
eml6 eml6,LOC107597181,LOC107680471 coding upstream 86493 12472719 ~ 12523419 (+)
sptbn1 sptbn1,LOC108442064,LOC108270927 coding upstream 143469 12375113 ~ 12466443 (+)
acyp2 acyp2,LOC107712999,LOC107744585 coding upstream 245503 12347655 ~ 12364409 (+)
LOC122353874 ralbb,ralba,LOC107558370,LOC107657963,LOC107713003,LOC107552396,LOC107741991,LOC107597482,LOC107746258 coding upstream 443570 12162078 ~ 12166342 (+)
atp6ap1la atp6ap1la,LOC107557415,LOC107597174,LOC107747526,LOC107657959,LOC107712951,LOC107680564 coding downstream 89777 12702307 ~ 12714931 (+)
pde12 pde12,LOC107682749,LOC107680466 coding downstream 103346 12715876 ~ 12719865 (+)
LOC122353879 arf4b,LOC107597172,LOC107747513,LOC107680530,LOC107557402,LOC107712993,LOC107657960 coding downstream 120224 12732754 ~ 12737640 (+)
LOC122353835 flnb,LOC107680511,LOC107657976,LOC107712990 coding downstream 212400 12824930 ~ 13158870 (+)
LOC122353848 LOC107657964,LOC107741992,LOC107680499,LOC108442067,LOC108271057 coding downstream 314800 12927330 ~ 12955366 (+)
G81266 LOC107712996,LOC107657949,LOC107557396 non-coding upstream 15809 12579907 ~ 12594103 (+)
G81261 NA non-coding upstream 38122 12571323 ~ 12571790 (+)
G81255 NA non-coding upstream 85595 12523853 ~ 12524317 (+)
LOC122353894 LOC107657969 non-coding upstream 237301 12365659 ~ 12372611 (+)
G81241 NA non-coding upstream 369521 12240133 ~ 12240391 (+)
G81254 NA non-coding downstream 55 12612585 ~ 12613651 (+)
G81378 asb14,LOC107680484,LOC107579398 non-coding downstream 76617 12689147 ~ 12690998 (+)
G81393 LOC107557402 non-coding downstream 113264 12725794 ~ 12727235 (+)
G81420 NA non-coding downstream 253449 12865979 ~ 12924171 (+)
G81421 NA non-coding downstream 274880 12887410 ~ 12889883 (+)
G81268 NA other upstream 24271 12582915 ~ 12585641 (+)
LOC122353844 LOC107747562,LOC107680562,LOC107597180,LOC107712997,LOC107657970,LOC107557419 other upstream 74486 12531326 ~ 12535426 (+)
G81213 LOC107741992,LOC107680499,LOC107657964,LOC108442067,LOC108271057,LOC107574809 other upstream 384420 12192754 ~ 12225492 (+)
LOC122353892 LOC107565225,LOC107684241,LOC107713230,LOC107702019,LOC107564758,LOC107753360,LOC107576527 other upstream 741389 11860659 ~ 11868523 (+)
shroom2b LOC107661152,LOC107552394,LOC107740069,LOC107705119,LOC107558375,LOC107702184 other upstream 752593 11827878 ~ 11857319 (+)
G81364 rps23,rs23,LOC107680479,LOC106566095,LOC107578001 other downstream 57259 12669789 ~ 12700884 (+)
slmapa slmapa,slmap,LOC107680512,LOC107657974,LOC107557391 other downstream 155677 12768207 ~ 13057220 (+)
G81416 rala,LOC107694485,LOC107741991,LOC107552396,LOC107713003,LOC107657963,LOC105901921 other downstream 262983 12875513 ~ 12879313 (+)
arid3a arid3a,LOC107685377,LOC107680546,LOC107553545,LOC107747603,LOC107597199 other downstream 552231 13164761 ~ 13210690 (+)
G81434 NA other downstream 616413 13228943 ~ 13231092 (+)

Expression


Co-expression Network