LOC122353873


Basic Information

Item Value
gene id LOC122353873
gene name NA
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056709.1
NCBI id CM032078.1
chromosome length 24513629
location 12601083 ~ 12602840 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043251764.1
AGCTGCTTCACAGAAGCTGTACAGTACTCTTGAAGATCAGACCATTTTTAGACTTTCGCAAGCAAGAAATGTCCGAAAACAGAGAACTGATCAAACACGGACAGGACGACAGTGatgaAGATTCTGATATTCTTCATACCACACGAAAGCACGAAGGAGATGGCCACGTAGGTTACGCCTCGACAAGTGGAACCGGCAAGAAAGTAGTTAAAAGAGAAGTATTCACACAGCCAAGTGTAAAACTTGCCACGGTGAATGCTTCAGTAAAGAACCTCGTAAGCATGATCGACACGTTCGACAGACCAGAAGGAACCTACGTAGAAGGCACCTACATTAAAAGCGGCACATATATCAGAGGTCTTGAAGACGCGCCGGGAGAGAGGCTTCCCAGGTTTGGAGCCGGTGCTGAAGCAGGAGTCGGACGAGCCGGCGCTGAATTCAGTGTGTTTGAGGCCGAAGCCAAAGGCCCCAACGCCTCGGCTGGAGTTGAAGCCAATGTCACTGGAGTCGGAGCGATGGCTCGAGCTGAACTCGCCAGCGCCTCAGCTCAGGCCGGTCCGGTCGGCGTCAAAGTGGGGCTTGGAGTGGACACCGGTGCCTCTGTTGGTGCGGACGGGGTGGAggtcaagttcctgggaaccggATTCTCCATTGGTCCAAAAACCAGTATATCTCTTCTGGGTTCAGAGGTGTCATGCTCCGTCATGTAACCGGACAGTTTGGATCCAGCCTTTGAGAAGATTTCACGGCGAAGACTTCAGCTCTGGATCTACATACAAAACTGACAACTATCGCTGTCTGATgtgattttttctttcattaatcataaataacatttctttttcttgcatTCCTAACATCTGTATGCTTTCGGGAGCAAATTGCTGAACTGCGCCTTtgaaaaaacaattactttacTCGACACTTGAAGCGGATCCAAACCAAAACTATTCatgtgtaacttttttttgattCACTTCAAATGTTTGCTACTGTAAATTGTAATGAATCATGTCATCTATGCTATATATCCTGCTGTATTCTTTTGGTCTGGAGGTTGTGATTAAAGCATATAGAGTTATATTTCTATTGCTTTTCTCTTCGGTGCTGTCATTCTCGGTGTATAACGCATTGTTGACGTAATATTCTGGATCAATCTTTTACCTTTTATACAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043251764.1 True 1175 mRNA 0.46 3 12601083 12602840

Neighbor

gene id symbol gene type direction distance location
eml6 eml6,LOC107597181,LOC107680471 coding upstream 77664 12472719 ~ 12523419 (+)
sptbn1 sptbn1,LOC108442064,LOC108270927 coding upstream 134640 12375113 ~ 12466443 (+)
acyp2 acyp2,LOC107712999,LOC107744585 coding upstream 236674 12347655 ~ 12364409 (+)
LOC122353874 ralbb,ralba,LOC107558370,LOC107657963,LOC107713003,LOC107552396,LOC107741991,LOC107597482,LOC107746258 coding upstream 434741 12162078 ~ 12166342 (+)
LOC122353838 LOC108444238,LOC108271228 coding upstream 646012 11893348 ~ 11955071 (+)
si:ch73-106k19.2 si:ch73-106k19.2,LOC107712967,LOC107557404,LOC107680468 coding downstream 7072 12609912 ~ 12612530 (+)
atp6ap1la atp6ap1la,LOC107557415,LOC107597174,LOC107747526,LOC107657959,LOC107712951,LOC107680564 coding downstream 99467 12702307 ~ 12714931 (+)
pde12 pde12,LOC107682749,LOC107680466 coding downstream 113036 12715876 ~ 12719865 (+)
LOC122353879 arf4b,LOC107597172,LOC107747513,LOC107680530,LOC107557402,LOC107712993,LOC107657960 coding downstream 129914 12732754 ~ 12737640 (+)
LOC122353835 flnb,LOC107680511,LOC107657976,LOC107712990 coding downstream 222090 12824930 ~ 13158870 (+)
G81266 LOC107712996,LOC107657949,LOC107557396 non-coding upstream 6980 12579907 ~ 12594103 (+)
G81261 NA non-coding upstream 29293 12571323 ~ 12571790 (+)
G81255 NA non-coding upstream 76766 12523853 ~ 12524317 (+)
LOC122353894 LOC107657969 non-coding upstream 228472 12365659 ~ 12372611 (+)
G81241 NA non-coding upstream 360692 12240133 ~ 12240391 (+)
G81254 NA non-coding downstream 9745 12612585 ~ 12613651 (+)
G81378 asb14,LOC107680484,LOC107579398 non-coding downstream 86307 12689147 ~ 12690998 (+)
G81393 LOC107557402 non-coding downstream 122954 12725794 ~ 12727235 (+)
G81420 NA non-coding downstream 263139 12865979 ~ 12924171 (+)
G81421 NA non-coding downstream 284570 12887410 ~ 12889883 (+)
G81268 NA other upstream 15442 12582915 ~ 12585641 (+)
LOC122353844 LOC107747562,LOC107680562,LOC107597180,LOC107712997,LOC107657970,LOC107557419 other upstream 65657 12531326 ~ 12535426 (+)
G81213 LOC107741992,LOC107680499,LOC107657964,LOC108442067,LOC108271057,LOC107574809 other upstream 375591 12192754 ~ 12225492 (+)
LOC122353892 LOC107565225,LOC107684241,LOC107713230,LOC107702019,LOC107564758,LOC107753360,LOC107576527 other upstream 732560 11860659 ~ 11868523 (+)
shroom2b LOC107661152,LOC107552394,LOC107740069,LOC107705119,LOC107558375,LOC107702184 other upstream 743764 11827878 ~ 11857319 (+)
G81364 rps23,rs23,LOC107680479,LOC106566095,LOC107578001 other downstream 66949 12669789 ~ 12700884 (+)
slmapa slmapa,slmap,LOC107680512,LOC107657974,LOC107557391 other downstream 165367 12768207 ~ 13057220 (+)
G81416 rala,LOC107694485,LOC107741991,LOC107552396,LOC107713003,LOC107657963,LOC105901921 other downstream 272673 12875513 ~ 12879313 (+)
arid3a arid3a,LOC107685377,LOC107680546,LOC107553545,LOC107747603,LOC107597199 other downstream 561921 13164761 ~ 13210690 (+)
G81434 NA other downstream 626103 13228943 ~ 13231092 (+)

Expression


Co-expression Network