CI01000000_17226578_17228246


Basic Information

Item Value
gene id CI01000000_17226578_17228246
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000000
NCBI id null
chromosome length 19091038
location 17226578 ~ 17228309 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000000_17226578_17228246.mRNA
CACTCTCAACAACAACAACATCACCCTCATCCCACTGTCAAGCTTCAACCACATGCCCAAGCTGCGGACACTTCATTTCTTTTTCTATCTATATCTCCTCCTTCCTCCGTCATGGCCGCCGAGCCTTCTCCCTGGAGCTCAAGCTCCACAGCCGAGCAGTCTGGCCTCCCTCCCATCAGTCAGCCCATCAGACAGGCCAGCCCCCTCATGCGGGATTGAATTTGCTGATGCTCGGATGGCCAGGCGCGTTGCTCCCTGGGCAGTATTGAATTATCCACAGCGAGGCTTTGGTTGCTACCCAGTTCCTTTGGATTGAATTTTCTGTCTCTAATATCCTTGATATATCTGTATTGAATTTGTTGCTCGTAAAAACAACTTA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000000_17226578_17228246.mRNA True 379 mRNA 0.50 2 17226578 17228309

Neighbor

gene id symbol gene type direction distance location
CI01000000_17095875_17098978 NA coding upstream 127600 17095804 ~ 17098978 (+)
CI01000000_16971818_16978284 NA coding upstream 247897 16971499 ~ 16978681 (+)
CI01000000_16922072_16941848 PDE6B, PDE6A coding upstream 284314 16922032 ~ 16942264 (+)
CI01000000_16919833_16920038 TMEM216 coding upstream 306503 16919833 ~ 16920075 (+)
CI01000000_16903722_16914680 NA coding upstream 311499 16903722 ~ 16915079 (+)
CI01000000_17228916_17261506 NA coding downstream 436 17228745 ~ 17261638 (+)
CI01000000_17267180_17298324 SLIT3 coding downstream 38871 17267180 ~ 17298324 (+)
CI01000000_17339270_17345013 CXCL14, CXL14 coding downstream 110961 17339154 ~ 17346200 (+)
CI01000000_17361598_17367002 NA coding downstream 132573 17360882 ~ 17367074 (+)
CI01000000_17388536_17403918 FAM13B coding downstream 159409 17387718 ~ 17405127 (+)
G11057 NA non-coding upstream 163431 17062923 ~ 17063147 (+)
G11053 NA non-coding upstream 170428 17055911 ~ 17056150 (+)
G11012 NA non-coding upstream 191735 17032576 ~ 17034843 (+)
G11039 NA non-coding upstream 211005 17015340 ~ 17015573 (+)
G11028 NA non-coding upstream 221922 17004402 ~ 17004656 (+)
G11309 NA non-coding downstream 118976 17347285 ~ 17347552 (+)
G11314 NA non-coding downstream 187547 17415856 ~ 17416095 (+)
G11251 NA non-coding downstream 322399 17550708 ~ 17582913 (+)
G11413 NA non-coding downstream 476026 17704335 ~ 17704550 (+)
G11423 NA non-coding downstream 499569 17727878 ~ 17729245 (+)
G10201 NA other upstream 1296016 15930266 ~ 15930562 (+)
G9201 NA other upstream 2991637 14215024 ~ 14234941 (+)
G7522 NA other upstream 5047570 12178369 ~ 12179008 (+)
G7514 NA other upstream 5089570 12136522 ~ 12137008 (+)
G7153 NA other upstream 5980945 11244457 ~ 11245633 (+)
G11465 NA other downstream 655644 17883953 ~ 17887462 (+)
G11521 NA other downstream 804430 18032739 ~ 18164112 (+)
G11801 NA other downstream 1452558 18674116 ~ 18745376 (+)

Expression


Co-expression Network