cant1b (cant1b,LOC107702024,LOC107700370,LOC107567625)


Basic Information

Item Value
gene id cant1b
gene name cant1b,LOC107702024,LOC107700370,LOC107567625
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056709.1
NCBI id CM032078.1
chromosome length 24513629
location 11424607 ~ 11434524 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043251851.1
TGAAGGTTAGTCGTGTCAGGGTTCAGGGTTTGCTTCGTCACTGTGGCGCAGCACGCTGATCTCAGAAGATGATGACAGACGAGGGCTGGGAGAAACTGATAATAACACACCGCTGAGAGAGAGACGCTCGCACTGAATGAAAGACTCTACAGCACACATGAGGGCCAGGAAGAGAGCGAGCCGCGGCCCGATGCACTCCATGCGGGTTTCCGTTCGCGGCGTCTCCATGTTCTCCTCCATCACCAGCGCCATCTCCGACCCGCGCTTCCGCTTCCGATGGCGGGCCATCACGGTGACGACCCTCCTGGCCTTGGCCGTCCTCGTCTACCTCCACCAAACGTCATCGAGCTCCACCGACGGCAAAGTTAGCGGTCAGCGCTCGTGGCGATCCAGCCGAGACGTGTCGGGGGCAGAGTCAGGCGGGATGGCCGCGGCCGAATCGATGGACTCGCGCTACAACGACACGTACCCGCTCAGTCCACCGGAAAACACGGCCAGCGGGATCCGTTACCGGATCGGAGTCATAGCGGACCTGGACACGAACTCACGGAGCCAGAAGGACGACACGTGGTTCAGCTTCCTGAAGCGGGGGCACCTGCTGGTGTCTGACAGCGGGGACAGCGTTTCCGTGGAGTGGGACCCGGAGCCCGTGGTTCTGGAGAGTCACCTGTCGGAGAAGGGCCGCGGCATGGAGCTGTCCGAGCTGGTGGCGTTTAACGGGCATCTGTACAGCGTGGACGACCGCACCGGCGTGGTCTACCGGATCGAGGCCAACAGAGCCGTGCCGTGGGTCATCCTGCCCGACGGAGACGGCAGCGTGTCTAAAGGTTTTAAGGCGGAGTGGTTGGCGGTGAAGGACGAGCGTCTGTATGTCGGAGGTCTCGGTAAGGAGTGGACGACCATCAGCGGAGAGTTCGTCAACAACAACCCTGAGTGGGTGAAGGTGATCGGTTTCCATGGTGACGTGGAGCACGAGAACTGGGTACCGCGGTATAACGCCTTGAAGAAAGCAGCAGATATCAGACCGCCAGGTTATCTGATCCACGAGTCGTCGGTGTGGAGCGAGCGTCTCCAGCGCTGGTTCTTTCTCCCGCGGCGCGCTAGCTCCGAGCGCTACGAGGAAACGGCGGACGAGCGGCGAGGAACAAACCTCATCCTGAGCTGCTCGCCGGACTTCGCTCAGATCTCGGTGTCACGCATCGGGCCGCTCAAGCCCACGCTCGGCTTCTCCTCCTTCAGATTCGTCCCCGACACCGACGACCAGATCGTGCTGGCGCTCAAATCGGAGGAGGACGCGGGACACATCGCCTCCTACATCACGGCCTTCACGCTGGACGGACGGGTCCTGCTGCCCGACACCAAGATCGGAGACGTCAAGTACGAAGGGCTGGAGTTCATCTAGATGGGGCGAGAGGCCAGCGGGCGTCCGTTACCCACGATGCATTGCGGCAGGTATTTTTTCAGACTCGTGCTGATGTGCAGACGGAGGTCCTCGGTGAGGGACGAGACGCGAGAGACAGACGCTCAGGGGACAGATGCAATAACAGAGACAACCTCGAACCAAAACAGAGCGGGGTTTCTGCAGGTCTGAAACATCTCGAAGCAATCGTTCACCCCGAAAGGACAACTCGAGTAGATCTAGACTGATAGAGAGAGGGTTTGCAAgcgggctgttttgggtcaccattgactcccatagtaggaaaaaaaatacaatggaagtcaatagtgaccCAAAGCAAACTTTgcgttcagcagaagaaagataTTCATACAGGTCTGGAAATACTccaaatgatgacaggatttattttttggggtgaactattgcttcaGTTAGTGTTTTTACTAATCGTGCGTCGGATCAGAGCAGGAAGTCgtggcattaaatgaaaaacttccCCAGAACATACAGTTCCGTTCAAAAATGTACTCTCTTACGCTCATCAAggctttatttgtttgaaaaaaagacattgtgaaatattctttGGCGCATAAAACTTAaagtacagtatttattcaaaatggaaatcttttactatcacttttttatccatttaacaCATAAAACTATTCATTACTTTAAAAGAAATGGACTGAACTCATTTGAGTGGTAGTGTATATGATAACACAAGattatgaataaatgctgtaattttttttttaagtatcacAGATTTTAATCACAGGCATTAATCttaaatcagtatattactatgatttctgaaggatcgtgtgacgctgaagactggagtaatgatgctgaaaacacagaaataaatcacactttaaagtatattacaacagaaactgttattttaaattgaaataacgTTTTACAAGATTACAGGGGTTTGTCTGTATTTCTTTATCAAATATATTCggccttgatgagcagaagagactttgttaaaaagaataaaacacttttaaatggtagGGTTTGTGTTGTTCTTAAAAAGTCTTCAATTGACTTGATCGAACCTGCAGAAACcctgcataataaataaatgggtgTACTAAGAAATGCACTAATGAGAATAATTCcagtaattgttttaaaataaaatatttgccttttattaaatactacAACACCTCAAAACCTACtttatttttgctgattttagtgtttttttgcCTATAAACTACACTGgatgtgtttaattaatattcGTTTGATTTATGGAATtaataagacatttaaaatgaatatgcaaataaagatgtattattaatttcaaacttt
>XM_043251852.1
AGAGGCGTCGCGTTTCATGGGCGGGGTTTCGTCTACCGGAGTGTTGGCAGCCGGCGGTTCGTTTCGAGGAAACGGCGCCAGAACCGGGATGGAGCGGGGATGAAATACCGCCTTACCTCACGACTTCAATCTTCCGCGTATGACTGAGGAGTCCACGAGCCGCGGCCCGATGCACTCCATGCGGGTTTCCGTTCGCGGCGTCTCCATGTTCTCCTCCATCACCAGCGCCATCTCCGACCCGCGCTTCCGCTTCCGATGGCGGGCCATCACGGTGACGACCCTCCTGGCCTTGGCCGTCCTCGTCTACCTCCACCAAACGTCATCGAGCTCCACCGACGGCAAAGTTAGCGGTCAGCGCTCGTGGCGATCCAGCCGAGACGTGTCGGGGGCAGAGTCAGGCGGGATGGCCGCGGCCGAATCGATGGACTCGCGCTACAACGACACGTACCCGCTCAGTCCACCGGAAAACACGGCCAGCGGGATCCGTTACCGGATCGGAGTCATAGCGGACCTGGACACGAACTCACGGAGCCAGAAGGACGACACGTGGTTCAGCTTCCTGAAGCGGGGGCACCTGCTGGTGTCTGACAGCGGGGACAGCGTTTCCGTGGAGTGGGACCCGGAGCCCGTGGTTCTGGAGAGTCACCTGTCGGAGAAGGGCCGCGGCATGGAGCTGTCCGAGCTGGTGGCGTTTAACGGGCATCTGTACAGCGTGGACGACCGCACCGGCGTGGTCTACCGGATCGAGGCCAACAGAGCCGTGCCGTGGGTCATCCTGCCCGACGGAGACGGCAGCGTGTCTAAAGGTTTTAAGGCGGAGTGGTTGGCGGTGAAGGACGAGCGTCTGTATGTCGGAGGTCTCGGTAAGGAGTGGACGACCATCAGCGGAGAGTTCGTCAACAACAACCCTGAGTGGGTGAAGGTGATCGGTTTCCATGGTGACGTGGAGCACGAGAACTGGGTACCGCGGTATAACGCCTTGAAGAAAGCAGCAGATATCAGACCGCCAGGTTATCTGATCCACGAGTCGTCGGTGTGGAGCGAGCGTCTCCAGCGCTGGTTCTTTCTCCCGCGGCGCGCTAGCTCCGAGCGCTACGAGGAAACGGCGGACGAGCGGCGAGGAACAAACCTCATCCTGAGCTGCTCGCCGGACTTCGCTCAGATCTCGGTGTCACGCATCGGGCCGCTCAAGCCCACGCTCGGCTTCTCCTCCTTCAGATTCGTCCCCGACACCGACGACCAGATCGTGCTGGCGCTCAAATCGGAGGAGGACGCGGGACACATCGCCTCCTACATCACGGCCTTCACGCTGGACGGACGGGTCCTGCTGCCCGACACCAAGATCGGAGACGTCAAGTACGAAGGGCTGGAGTTCATCTAGATGGGGCGAGAGGCCAGCGGGCGTCCGTTACCCACGATGCATTGCGGCAGGTATTTTTTCAGACTCGTGCTGATGTGCAGACGGAGGTCCTCGGTGAGGGACGAGACGCGAGAGACAGACGCTCAGGGGACAGATGCAATAACAGAGACAACCTCGAACCAAAACAGAGCGGGGTTTCTGCAGGTCTGAAACATCTCGAAGCAATCGTTCACCCCGAAAGGACAACTCGAGTAGATCTAGACTGATAGAGAGAGGGTTTGCAAgcgggctgttttgggtcaccattgactcccatagtaggaaaaaaaatacaatggaagtcaatagtgaccCAAAGCAAACTTTgcgttcagcagaagaaagataTTCATACAGGTCTGGAAATACTccaaatgatgacaggatttattttttggggtgaactattgcttcaGTTAGTGTTTTTACTAATCGTGCGTCGGATCAGAGCAGGAAGTCgtggcattaaatgaaaaacttccCCAGAACATACAGTTCCGTTCAAAAATGTACTCTCTTACGCTCATCAAggctttatttgtttgaaaaaaagacattgtgaaatattctttGGCGCATAAAACTTAaagtacagtatttattcaaaatggaaatcttttactatcacttttttatccatttaacaCATAAAACTATTCATTACTTTAAAAGAAATGGACTGAACTCATTTGAGTGGTAGTGTATATGATAACACAAGattatgaataaatgctgtaattttttttttaagtatcacAGATTTTAATCACAGGCATTAATCttaaatcagtatattactatgatttctgaaggatcgtgtgacgctgaagactggagtaatgatgctgaaaacacagaaataaatcacactttaaagtatattacaacagaaactgttattttaaattgaaataacgTTTTACAAGATTACAGGGGTTTGTCTGTATTTCTTTATCAAATATATTCggccttgatgagcagaagagactttgttaaaaagaataaaacacttttaaatggtagGGTTTGTGTTGTTCTTAAAAAGTCTTCAATTGACTTGATCGAACCTGCAGAAACcctgcataataaataaatgggtgTACTAAGAAATGCACTAATGAGAATAATTCcagtaattgttttaaaataaaatatttgccttttattaaatactacAACACCTCAAAACCTACtttatttttgctgattttagtgtttttttgcCTATAAACTACACTGgatgtgtttaattaatattcGTTTGATTTATGGAATtaataagacatttaaaatgaatatgcaaataaagatgtattattaatttcaaacttt

Function

symbol description
cant1b Predicted to enable calcium ion binding activity and nucleoside-diphosphatase activity. Human ortholog(s) of this gene implicated in Desbuquois dysplasia and multiple epiphyseal dysplasia 7. Orthologous to human CANT1 (calcium activated nucleotidase 1).

NR:

description
PREDICTED: soluble calcium-activated nucleotidase 1-like isoform X1

GO:

id name namespace
GO:0005509 calcium ion binding molecular_function
GO:0016462 pyrophosphatase activity molecular_function

KEGG:

id description
K12304 CANT1; soluble calcium-activated nucleotidase 1

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043251851.1 True 2752 mRNA 0.49 5 11426756 11434524
XM_043251852.1 False 2731 mRNA 0.49 5 11424607 11434524

Neighbor

gene id symbol gene type direction distance location
afmid afmid coding upstream 393 11417605 ~ 11424214 (+)
syngr2b syngr2b,LOC107702021,LOC107713240,LOC107564563,LOC107700198 coding upstream 20058 11397046 ~ 11404549 (+)
si:dkey-93h22.7 NA coding upstream 27980 11392893 ~ 11396627 (+)
LOC122354629 LOC107564562,LOC107713253,LOC107702029 coding upstream 33149 11384307 ~ 11391458 (+)
tmc8 LOC107713252,LOC107702016 coding upstream 40576 11375307 ~ 11384031 (+)
ldb1b LOC107702035,LOC107564569,LOC107713246,LOC108444470,LOC107700700,LOC107567630 coding downstream 35795 11470319 ~ 11485482 (+)
orc2 orc2,LOC107702034,LOC107702742,LOC107564576,LOC107740071,LOC107564577 coding downstream 51992 11486516 ~ 11499922 (+)
LOC122354143 pfklb,pfkl,LOC108444469 coding downstream 77809 11512333 ~ 11523658 (+)
opn6a LOC107740064,LOC107567633,LOC107702020 coding downstream 105154 11539678 ~ 11547713 (+)
map1lc3c map1lc3c,LOC107701141,LOC107702025 coding downstream 163266 11597790 ~ 11599698 (+)
G80784 NA non-coding upstream 96929 11326427 ~ 11327678 (+)
G80661 mafgb,mafg,LOC107564557,LOC107702026 non-coding upstream 154900 11263422 ~ 11269707 (+)
G80766 NA non-coding upstream 164232 11258381 ~ 11260375 (+)
G80764 NA non-coding upstream 173900 11249895 ~ 11250707 (+)
G80763 NA non-coding upstream 192089 11232087 ~ 11232518 (+)
G80667 LOC107567635 non-coding downstream 3383 11437907 ~ 11438726 (+)
LOC122353945 NA non-coding downstream 9116 11443640 ~ 11447521 (+)
G80668 NA non-coding downstream 14525 11449049 ~ 11452138 (+)
G80804 NA non-coding downstream 37447 11471971 ~ 11472301 (+)
G80808 NA non-coding downstream 73476 11508000 ~ 11509053 (+)
G80761 NA other upstream 197985 11222347 ~ 11226622 (+)
G80638 NA other upstream 762637 10641132 ~ 10661970 (+)
G80551 LOC107659525,LOC107581741,LOC107718227,LOC107685975,LOC107573079,LOC103355429 other upstream 953420 10466622 ~ 10471187 (+)
pik3ca pik3ca,LOC107574159,LOC107685965 other upstream 1884486 9521798 ~ 9540121 (+)
chchd4a chchd4a,chchd4,LOC107574929,LOC107715767 other upstream 1999305 9422950 ~ 9425302 (+)
LOC122354145 pfkl,pfklb,LOC107564579,LOC108444469 other downstream 71129 11505653 ~ 11507771 (+)
rpl37a rpl37a,RPL37A,zgc:171772,LOC107564751,LOC107567628 other downstream 90499 11525023 ~ 11527042 (+)
eif4a3 eif4a3,LOC107702040 other downstream 94195 11528719 ~ 11535114 (+)
LOC122354243 irf2bp2b,LOC107713243,LOC107564749,LOC107567632,LOC107683260,LOC107740065 other downstream 145502 11580026 ~ 11672957 (+)
tomm20b tomm20b,tomm20,LOC107740066,LOC107701232,LOC107661159,LOC107713233 other downstream 263800 11698324 ~ 11700214 (+)

Expression


Co-expression Network