LOC122353956 (LOC107751587,LOC107552203,LOC107696908,LOC107714543)


Basic Information

Item Value
gene id LOC122353956
gene name LOC107751587,LOC107552203,LOC107696908,LOC107714543
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056709.1
NCBI id CM032078.1
chromosome length 24513629
location 289980 ~ 290350 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043251864.1
ccaCCTGTCAGTGTATAAGCCGCAGAGTTCTCAGGAAGCAGCACCTGTtcttccatctctctctctctccgtcagTCATGAGCTCCAACAACTTCAGCAGCCGTTCCGTGGGCTCTCAGCCCGGCGCCGGAGCTCAGATACCCCGGCAGGGGAACTCGTACTTCGGCTTCGGGAACGTGTCTCCGGCCGCGGTCCCCATCAAGCCTGTGTCCGTAAACACAAGCCTCCTGACCCCCGTCGATCTTCAGCTGGACCCTGACCTGCAGTCTGTGAGGATCCAGGAGAAAGAAGAGATCAAAACTCTCAACAACCGCTTTGCCTCCTTCATCGACAAggtgatctatctatctatctatctatctatctatcta

Function

NR:

description
PREDICTED: keratin, type II cytoskeletal 8-like

GO:

id name namespace
GO:0045095 keratin filament cellular_component
GO:0005198 structural molecule activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043251864.1 True 371 mRNA 0.55 1 289980 290350

Neighbor

gene id symbol gene type direction distance location
LOC122353951 arfgap1 coding downstream 103129 179559 ~ 186851 (-)
LOC122353658 NA coding downstream 282190 5676 ~ 7790 (-)
cdk4 cdk4,LOC107747701,LOC107701179,LOC107567936,LOC106583286 coding upstream 48745 339095 ~ 346418 (-)
tegt tegt,LOC107574446,LOC107567938,LOC107684007,LOC107713865,LOC107711598,LOC107698838 coding upstream 77496 367846 ~ 372472 (-)
avil avil,LOC107567939,LOC107684013,LOC107711597,LOC107698837,LOC107574443 coding upstream 83810 374160 ~ 385324 (-)
si:ch1073-456m8.1 NA coding upstream 95684 386034 ~ 394186 (-)
LOC122353667 cyp27b1,LOC107747831,LOC107561793,LOC107684010 coding upstream 115671 406021 ~ 412585 (-)
G78150 NA non-coding downstream 17016 271740 ~ 272964 (-)
G78149 NA non-coding downstream 18623 270980 ~ 271357 (-)
G78140 NA non-coding downstream 52081 237488 ~ 237899 (-)
G78109 NA non-coding downstream 221711 67765 ~ 68269 (-)
G78106 NA non-coding downstream 224839 63074 ~ 65141 (-)
G78162 NA non-coding upstream 140644 430994 ~ 431422 (-)
G78164 NA non-coding upstream 141337 431687 ~ 438660 (-)
G78167 dusp7,LOC107561798,LOC107677944,LOC107697567,LOC107712495 non-coding upstream 167943 458293 ~ 506641 (-)
G78192 NA non-coding upstream 302265 592615 ~ 594641 (-)
LOC122353904 NA non-coding upstream 428925 719275 ~ 721631 (-)
LOC122353949 prph,LOC107683634,LOC107730884,LOC107696041,LOC107737370 other downstream 1034 282263 ~ 288946 (-)
LOC122354323 LOC107706475,LOC107589231,LOC107700775,LOC107591713,LOC107703600,LOC107722831 other downstream 9403 274866 ~ 280577 (-)
LOC122353952 cdk4,LOC107747701,LOC107567936,LOC107701179,LOC106583286 other downstream 64149 217174 ~ 225831 (-)
LOC122354324 arfgap1 other upstream 31863 322213 ~ 329039 (-)
LOC122353669 mettl21b,LOC107684011 other upstream 112590 402940 ~ 405411 (-)
G78144 alas1 other upstream 153535 443885 ~ 448901 (-)
G78170 NA other upstream 162784 453134 ~ 455998 (-)
G78195 atp2b2,slc6a1b,slc6a1,LOC107561799,LOC107570616,LOC107670967,LOC107746710,LOC107570615,LOC107697564 other upstream 308757 599107 ~ 794136 (-)

Expression


Co-expression Network