CI01000000_17339270_17345013 (CXCL14, CXL14)


Basic Information

Item Value
gene id CI01000000_17339270_17345013
gene name CXCL14, CXL14
gene type misc
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000000
NCBI id null
chromosome length 19091038
location 17339154 ~ 17346200 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000000_17339270_17345013.mRNA
GATCTCGATTATTGGATTTGAGTGGTACAAACAGACCGGAGGCTGCTGGAGGTTCTCAACAAACTATTTGGGATGAATCGCTGTACGGCCGCTTTGCTTTTGCTGGTTATCGCCGTTTATTCACTCAATACAGAGGAGGCTGTTTAGAGATGATGCTGAATGAAGCAGAGAAGATTGATGAGGGATTAGATGTAGCATATAAGTGCAGATGCACAAGAAAAGGCCCGAAGATCCGGTACAAAGATGTGCAAAAGCTGGAGATCAAGCCTAAACATCCGTACTGCCAAGAAAAGATGATATTTGTCACCATGGAGAATGTGTCCCGTTTCAAAGGTCAAGAGTATTGCCTGCACCCCAGACTCCAGAGCACTAAGAACCTTGTCAAGTGGTTCAAAATCTGGAAGGACAAACACAGGGTGTACGAGGCCTAATCGTTCTACATTATGCACGAGGCTGAAAACATTGTGGGATGCACAGCACTACCAGTGAACTGTGGATGACCAGAGGACCAATTTTTTTAAAGCATGACAAAGCATATACCCAGACAAGCTTACA
>TU12413
ACAGATTGAGGAGAGCGCGCAACGGTGTGCATGACGTCTCGCGGAGCACTTTCAACCTGCTACTGACATTATAGAGACAGAGATTGGGTTTATCATCAAAACTCACACTGTTTGAGGATCTCGATTATTGGATTTGAGTGGTACAAACAGACCGGAGGCTGCTGGAGGTTCTCAACAAACTATTTGGGATGAATCGCTGTACGGCCGCTTTGCTTTTGCTGGTTATCGCCGTTTATTCACTCAATACAGAGGCATATAAGTGCAGATGCACAAGAAAAGGCCCGAAGATCCGGTACAAAGATGTGCAAAAGCTGGAGATCAAGCCTAAACATCCGTACTGCCAAGAAAAGATGATATTTGTCACCATGGAGAATGTGTCCCGTTTCAAAGGTCAAGAGTATTGCCTGCACCCCAGACTCCAGAGCACTAAGAACCTTGTCAAGTGGTTCAAAATCTGGAAGGACAAACACAGGGTGTACGAGGCCTAATCGTTCTACATTATGCACGAGGCTGAAAACATTGTGGGATGCACAGCACTACCAGTGAACTGTGGATGACCAGAGGACCAATTTTTTTAAAGCATGACAAAGCATATACCCAGACAAGCTTACAATAAAGCACACCAGTCCATTTTATTAAGTTATATTAATGTGGAATAATTTATAGTCATACAGAAATGTTTATGTTGAGCCAAATGTGCAGTTATGGCAGAGAAAAGCGCCATCTGTAAGAAGTGACCATTACATTTTGCAATGTGTAATGTTTTCTGAAGCATCAGTTCTTGGTCTGATTCATTGTGTTGTGGCATATAAAGGAGTCCTGACACTATATTTGGATACTGTCTGGTTTGAAACTACTGTGATATACTATCCACAAGTGTCAAAGTAGATCTTAGAGTTCTCGCAGTACAAATGAACAGAAATATTGAGGATGTGTAAATAATATCTTCAGAGAGTTTACGGTGTTCTAAGCCAACATCCAACCGGTAAAAGGAGGGAAAGTGTCTTTCTTCACAATCATTTTCCAAACATTGTTTCTCATCGATCTGCCCAAAAGAGCTTTCTTATGTAACTTATTCACTTATTACTTTGGAATTTGGTACTTCATGGTGAAGTAAAGGAGACAATGCTACGTTAAATACTATAAACAGTTTAAATCATATCATACCTTTACTTTATATTTACACATATACTTTATTCCTCTGTGGACATGTACTGTCACACGACAAGCACGTGACCCTTGGGGCCTGCAGTAGGTCGTGTTTAAAATGAAGCTTTTTATTTAATATTGGCCCTCCTATCAGCACAATATATGTGCCTCCTCCTCTTTTGAGGTGTGCAGGATTTGTAAGCTATTGTTTTAAATTGTTTGTTTGGTATGACTGTGTTTTTCTTTTTGGTAAATGGAATGTTTCTCGTCTCTTCTTGTACATCAGATTGTATGTATAAGCACACAGAATAGGTTCTTGTGTATGGACCACCTTGCCTATAGTCTAGCTCGTTCTGAATTTATTAGTGAAGCCTATGTATTGTATCACAGAATTGTTGTTTTACTATTTAAATAATAAATAATAGAAATGTTTTGAGTCTATGTGTTTGGACTGACCCACCAAACACAACTTAAGTCCAAGGAGTGTAATCTTCAAGCACAGCAATAAACATTTAAATAAATCACA
>TU12414
ACAGATTGAGGAGAGCGCGCAACGGTGTGCATGACGTCTCGCGGAGCACTTTCAACCTGCTACTGACATTATAGAGACAGAGATTGGGTTTATCATCAAAACTCACACTGTTTGAGGATCTCGATTATTGGATTTGAGTGGTACAAACAGACCGGAGGCTGCTGGAGGTTCTCAACAAACTATTTGGGATGAATCGCTGTACGGCCGCTTTGCTTTTGCTGGTTATCGCCGTTTATTCACTCAATACAGAGGCATATAAGTGCAGATGCACAAGAAAAGGCCCGAAGATCCGGTACAAAGATGTGCAAAAGCTGGAGATCAAGCCTAAACATCCGTACTGCCAAGAAAAGATGATATTTGTCACCATGGAGAATGTGTCCCGTTTCAAAGGTCAAGAGTATTGCCTGCACCCCAGACTCCAGAGCACTAAGAACCTTGTCAAGTGGTTCAAAATCTGGAAGGACAAACACAGGGTGTACGAGGCCTAATCGTTCTACATTATGCACGAGGCTGAAAACATTGTGGGATGCACAGCACTACCAGTGAACTGTGGATGACCAGAGGACCAATTTTTTTAAAGCATGACAAAGCATATACCCAGACAAGCTTACAATAAAGCACACCAGTCCATTTTATTAAGTTATATTAATGTGGAATAATTTATAGTCATACAGAAATGTTTATGTTGAGCCAAATGTGCAGTTATGGCAGAGAAAAGCGCCATCTGTAAGAAGTGACCATTACATTTTGCAATGTGTAATGTTTTCTGAAGCATCAGTTCTTGGTCTGATTCATTGTGTTGTGGCATATAAAGGAGTCCTGACACTATATTTGGATACTGTCTGGTTTGAAACTACTGTGATATACTATCCACAAGTGTCAAAGTAGATCTTAGAGTTCTCGCAGTACAAATGAACAGAAATATTGAGGATGTGTAAATAATATCTTCAGAGAGTTTACGGTGTTCTAAGCCAACATCCAACCGGTAAAAGGAGGGAAAGTGTCTTTCTTCACAATCATTTTCCAAACATTGTTTCTCATCGATCTGCCCAAAAGAGCTTTCTTATGTAACTTATTCACTTATTACTTTGGAATTTGGTACTTCATGGTGAAGTAAAGGAGACAATGCTACGTTAAATACTATAAACAGTTTAAATCATATCATACCTTTACTTTATATTTACACATATACTTTATTCCTCTGTGGACATGTACTGTCACACGACAAGCACGTGACCCTTGGGGCCTGCAGTAGGTCGTGTTTAAAATGAAGCTTTTTATTTAATATTGGCCCTCCTATCAGCACAATATATGTGCCTCCTCCTCTTTTGAGGTGTGCAGGATTTGTAAGCTATTGTTTTAAATTGTTTGTTTGGTATGACTGTGTTTTTCTTTTTGGTAAATGGAATGTTTCTCGTCTCTTCTTGTACATCAGATTGTATGTATAAGCACACAGAATAGGTTCTTGTGTATGGACCACCTTGCCTATAGTCTAGCTCGTTCTGAATTTATTAGTGAAGCCTATGTATTGTATCACAGAATTGTTGTTTTACTATTTAAATAATAAATAATAGAAATGTTTTGAGTCTATGTGTTTGGACTGACCCACCAAACACAACTTAAGTCCAAGGAGTGTAATCTTCAAGCACAGC

Function

symbol description
cxcl14 Predicted to enable chemokine activity. Predicted to be involved in antimicrobial humoral immune response mediated by antimicrobial peptide. Predicted to act upstream of or within cell chemotaxis and immune response. Predicted to be located in extracellular space and membrane. Predicted to be integral component of membrane. Is expressed in several structures, including integument; liver; nervous system; otic vesicle; and periderm. Orthologous to human CXCL14 (C-X-C motif chemokine ligand 14).

GO:

id name namespace
GO:0008009 chemokine activity molecular_function

KEGG:

id description
K10033 CXCL14, SCYB14; C-X-C motif chemokine 14

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000000_17339270_17345013.mRNA False 555 mRNA 0.45 5 17339270 17345137
TU12413 False 1675 TUCP 0.39 4 17339154 17346200
TU12414 True 1652 TUCP 0.39 4 17339154 17346177

Neighbor

gene id symbol gene type direction distance location
CI01000000_17267180_17298324 SLIT3 coding upstream 40946 17267180 ~ 17298324 (+)
CI01000000_17228916_17261506 NA coding upstream 77632 17228745 ~ 17261638 (+)
CI01000000_17226578_17228246 NA coding upstream 110961 17226578 ~ 17228309 (+)
CI01000000_17095875_17098978 NA coding upstream 240292 17095804 ~ 17098978 (+)
CI01000000_16971818_16978284 NA coding upstream 360589 16971499 ~ 16978681 (+)
CI01000000_17361598_17367002 NA coding downstream 15745 17360882 ~ 17367074 (+)
CI01000000_17388536_17403918 FAM13B coding downstream 42581 17387718 ~ 17405127 (+)
CI01000000_17478377_17481058 NA coding downstream 133240 17478377 ~ 17482171 (+)
CI01000000_17501554_17504867 NA coding downstream 156417 17501554 ~ 17504904 (+)
CI01000000_17507574_17510080 MDP1 coding downstream 162437 17507574 ~ 17510895 (+)
G11057 NA non-coding upstream 276123 17062923 ~ 17063147 (+)
G11053 NA non-coding upstream 283120 17055911 ~ 17056150 (+)
G11012 NA non-coding upstream 304427 17032576 ~ 17034843 (+)
G11039 NA non-coding upstream 323697 17015340 ~ 17015573 (+)
G11028 NA non-coding upstream 334614 17004402 ~ 17004656 (+)
G11309 NA non-coding downstream 2148 17347285 ~ 17347552 (+)
G11314 NA non-coding downstream 70719 17415856 ~ 17416095 (+)
G11251 NA non-coding downstream 205571 17550708 ~ 17582913 (+)
G11413 NA non-coding downstream 359198 17704335 ~ 17704550 (+)
G11423 NA non-coding downstream 382741 17727878 ~ 17729245 (+)
G10201 NA other upstream 1408708 15930266 ~ 15930562 (+)
G9201 NA other upstream 3104329 14215024 ~ 14234941 (+)
G7522 NA other upstream 5160262 12178369 ~ 12179008 (+)
G7514 NA other upstream 5202262 12136522 ~ 12137008 (+)
G7153 NA other upstream 6093637 11244457 ~ 11245633 (+)
G11465 NA other downstream 538816 17883953 ~ 17887462 (+)
G11521 NA other downstream 687602 18032739 ~ 18164112 (+)
G11801 NA other downstream 1335730 18674116 ~ 18745376 (+)

Expression


Co-expression Network