itih3a.1 (itih3a,LOC107714497,LOC107699348,LOC107556004)


Basic Information

Item Value
gene id itih3a.1
gene name itih3a,LOC107714497,LOC107699348,LOC107556004
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056709.1
NCBI id CM032078.1
chromosome length 24513629
location 3225810 ~ 3241259 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043252001.1
TTTTAGAGTGTTTAAAAGCCCTGAATGTGGTCGACAGTCGACAGTGCATCATGTCTACAGGGTGGATATTCTGCGTCTTTGTGTGCATATGTTTTTCTTCAGGGTCTTTTGAGTCCTTGGTCATCTCAAAGGGACACGAGCAATGGGTCGGTGACACCAGCATGACCAGACTCTTAAAGAAGAGAAGCGTGAGCAGTCCTGAGATAGAGGTGCAGAGCATAAAGGTGGACTGCAAGGTGACGTCACGTTTTGCCCACACTGTCATGACCACTAAAGCTCTCAACAAGGCCAACGTCTCACAAGAAGTGTCTTTTGAGGTGGAGTTACCTAAGACGTCCTTCATCACCAACTTCAGCATGGAGATTGATGGCAAGACATTCACAGGTGTGGTGAAGGAAAAAGAGAAGGCCAAGCAGCAGTATCAGAAGGCTGTGTCATCTGGACAGACTGCTGGTTTAGTCAAGGCTTCCGGTCGAAAAATGGAGAAGTTTTCTGTTAACGTGAATGTCGCAGCAGACAGCAGTGTCATATTTGTTCTCACCTATGAGGAACTTCTGAAGCGACAATTTGGCAAATATGAGCTCATGATCAGAGTCAAACCCAAACAGCTGGTCCAGCACTTTGAGATCGTAGCAGACATTTTTGAACCGCAGGGAATTGCGTTTGTGGACGCCTACGGTACTTTTATCACCAATGAACTGCTCCCTCTAGTGGAGAAAACTGTCACTGACAAGAAGGCCCATGTGTCCTTCTCTCCAACAATGGATCAACAGAGGAAATGCACTGAGTGTGATGGGACACTCATCGATGGAGATTTCTTCATTAAGTATGATGTCAACCGTGCTCAGGACATTGGTGATATCCAGATTGTAAATGGAtactttgtgcattttttcgCACCCGCTAACTTTCCAAGAGTGCCAAAAATGGTTGTTTTTGTGATAGACAACAGCTACTCTATGGTgggaaataaaatgtcacagACTAAAGAGGCTCTGGGGACCATCCTGGGTGATCTCCCAGAGGACGACTACTTTGCCATCATTGTATTTTCAACCACCTTTGTTGTGTGGCGGCCATATTTAAGCAAAGCAACACCAGAAAATGTGAAAGAAGCCCAGGAATATGTCAAAACAATTGAAGTTATTGGTGGTACTGAATTGCATGATGCTGTCATTCATGGTGTGAATATGTTGTATGAAGAGCAGCGTAACGGTACAGCGCCAAAGAACATGGTGCAGATGATCATTTTGCTGACCGATGGAGAACCAaacacatatcCGAGAACTCTTCCTGAGATCCAAGAGAGCATTCGTCACGCCATTGATGGGAATATCACTCTGTTCAGTTTGGCTTTTGGTAAAGACGCAAACTATGGATTTTTGGATACTTTGAGCAAGCAGAATAATGGATTGGTTCGCAGGATTTATGAGGACTCGGATGCCCCACTTCAGCTAAAGGGATTTTATGAAGAAGTCTCAAGTCCTTTGCTCTCAGACGTGCATTTTCGCTATCCGGACAACGCAGTTAACTCACTGacaaaaagccattttaaacaGCTCTTCAACGGCTCTGAGATCATGGTCGCTGGTCAACTTAATGACTTAAATGAAATAGACAACTTCGCAATTGAAGTGTCCGCACAAGGGTTCCAAAATAACGTTGAGCTGAAAGGTCAAGCGAATACTCAGAAGTGGGAAACCATATTTCCTGGTGAAGAGTATATATTTGGGGACTTTACTGAGCGTCTCTGGGCATATATGACCATCCAGGAGCTACTAGATACAAAAGACAAGGGTACACCAGAGGAGAAAGGAAATGCCACTGAAAAAGCTCTGCACCTTTCGTTAAAGTACAACTTTGTTACGCCACTTACCTCCATGGTTGTCACCAAACCTGAAGATGAGACTAAAAACGACACATTTATTGCTGACAAGCTGACTGAAGAGGAACGAGgaaatgtccaaaaatatgGTTACACAGGCATAGCGTACAGCTACCCCAAGTACACTGCACCCACATATTATGTTGATGGAGATCCACATTTCATCATTGAGCTGCCAGACCAGAACGATGCTCTTTGCTTCAACATTGATGACAAACCTGGTACCATCTTTAACCTGGTTAGAGATTCACTTACAGGTATTGTGGTCAATGGCCAAACCATTGGAGATAAGAAAGTCATCCCAGGAAGCACAATGCACACCTATTTTGGGCGGTTTGGGATTGTTCATGAGAAGTTTGGTATCAGATTGATGGTGAGCACAAAGGAGATCGTAGTGTCTGAAAAGGGAAAACGAGCAAAATTCTTCTGGACTGACACGGCAACAGTTAAAGGGCCCAACATGGATCTGCACGTGATCAAAGATCGCAGTTTAACAGTGACCCTAAGGAACTCAGTCAAGTTTCTTATCATCCTGCACAAAGTCTGGCAGAAACACCCATACCATCAAGACTACCTCGGGTTCTACACATTGGACAGTCACCTCTTTTCAAGCAATGTCCATGGAAtgcttgGTCAGTTCTACCATGGACTGCAGTTTGAAGTGAGTGAAACGTTTCCAGGAAGGGATCCAAACAAACCAGATGCCATGATGTTGGTGAAGGGACAAGAACTTATAGTTACCAGGGGTTGGCAGAAAGATTTCAGACAGGACGTGAAGAACGGAGAAAATGTGCCCTGTTGGTTCATTCACAATAACGGCACCGGGCTCCTCGATGGAGTTCACACAGACTACATCGTCTCCGGTCTCTTCAAGACAATCTAACAGCGAGCCATGAAAGCCAGAGAAAATGATGACCGACAGCTATAATGAACCAGAGGAAGacttcaaaaaaaaaggaacatgtTATCATCAAAATAACAATCCCAACAACAAATTGCTTTCGCatcaaaatacagatttttcaaTAATCAGATACTGAAATGGTatttaaactcattttgttTGGTTCACAGTTAAGGCGGCAAAGCCAGTCAATTTGATACGCATATATAATATGCGCCACtcatgctttattttcatattcatacaatttctaacattttttaaagacttGATTACAGCATTGCACTAgatttgtaataaaaaagcatCTGTAAA

Function

NR:

description
PREDICTED: inter-alpha-trypsin inhibitor heavy chain H3-like isoform X1

GO: NA

KEGG:

id description
K24513 ITIH3, SHAP; inter-alpha-trypsin inhibitor heavy chain H3

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043252001.1 True 3104 mRNA 0.43 22 3225810 3241259

Neighbor

gene id symbol gene type direction distance location
itih3a.2 itih1,LOC107714498,LOC107699349,LOC107555992,LOC107744852,LOC107680411 coding upstream 192 3212989 ~ 3225618 (+)
gata2a gata2a,gata2,LOC107714496,LOC107744843 coding upstream 111790 3099718 ~ 3114020 (+)
rpn1 rpn1,LOC107714495,LOC107699351,LOC107680451,LOC107744844,LOC107573146 coding upstream 141709 3077381 ~ 3084101 (+)
LOC122353826 pbrm1,LOC107744848,LOC107714479,LOC107699352 coding upstream 149371 3058375 ~ 3076439 (+)
glt8d1 glt8d1,LOC107714493,LOC107744846 coding upstream 173734 3048774 ~ 3052076 (+)
dnajc16l LOC107680433,LOC107714499,LOC107572849,LOC107556003 coding downstream 3570 3244829 ~ 3253849 (+)
si:dkey-33m11.7 LOC107680412,LOC107555990,LOC107714481,LOC107699319,LOC107751023 coding downstream 22370 3263629 ~ 3267276 (+)
ddx19b ddx19,LOC107680447,LOC107572851,LOC107699345,LOC107556002,LOC108255077,LOC108411521,LOC107714482 coding downstream 37542 3278801 ~ 3285540 (+)
acap3b acap3b,LOC107714502,LOC107751006 coding downstream 59124 3300383 ~ 3356156 (+)
hipk1b si:ch211-160o17.4,hipk1,LOC107680439,LOC107714503,LOC107699342 coding downstream 120544 3361803 ~ 3377622 (+)
G78815 NA non-coding upstream 109380 3115425 ~ 3116430 (+)
G78797 NA non-coding upstream 222819 3001119 ~ 3002991 (+)
G78784 NA non-coding upstream 412528 2812377 ~ 2813282 (+)
G78772 NA non-coding upstream 525107 2700395 ~ 2700703 (+)
G78757 NA non-coding upstream 737257 2488214 ~ 2488553 (+)
G78886 NA non-coding downstream 46942 3288201 ~ 3291400 (+)
G78898 NA non-coding downstream 150305 3391564 ~ 3391790 (+)
G79002 NA non-coding downstream 298729 3539988 ~ 3541069 (+)
G79021 NA non-coding downstream 460486 3701745 ~ 3702033 (+)
G79022 NA non-coding downstream 462982 3704241 ~ 3726091 (+)
G78790 NA other upstream 399016 2825539 ~ 2826794 (+)
G78763 NA other upstream 545668 2678135 ~ 2680142 (+)
G78506 inpp1,LOC107737355,LOC107683640,LOC107730897 other upstream 1499713 1644631 ~ 1726097 (+)
nabp2 si:ch73-190f16.2,nabp2,LOC107572067,LOC107557546,LOC107683643,LOC107675336,LOC107737367,LOC106565411 other upstream 1544610 1678226 ~ 1681200 (+)
G78500 NA other upstream 1632685 1590744 ~ 1593125 (+)
camk2n1 si:dkey-33m11.6,LOC107572850,LOC107680422,LOC107555994,LOC107751034,LOC107714486,LOC107699327 other downstream 28940 3270199 ~ 3272619 (+)
LOC122353713 LOC107714487,LOC107555999 other downstream 116951 3358210 ~ 3361658 (+)
tmem167b tmem167b,LOC107592590,LOC107555997,LOC107699326 other downstream 144999 3386258 ~ 3391229 (+)
nwd1 nwd1,LOC107730478,LOC107710443,LOC107658741,LOC107592553,LOC107655543 other downstream 530296 3771555 ~ 3785342 (+)
trnaq-cug_17 NA other downstream 542705 3783964 ~ 3784035 (+)

Expression


Co-expression Network