LOC122354069


Basic Information

Item Value
gene id LOC122354069
gene name NA
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056709.1
NCBI id CM032078.1
chromosome length 24513629
location 17802393 ~ 17805778 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043252066.1
TATTTCAACATGCCCACAGTGGCGTTGGGGTTGGAGTAAGAGCAGCGATTGGTTGAGACAAGTTACCTTGTGTGTAGtcttcatatataaaaacagtgaCGTTTAAAAAGATAAGCGCAACTGCAACCAAAGGATCATCTGACAGTCTATACAGACTTTGCTCTTAAGATGGCGGCAAATGGAAAACATTGGGTGATGCTTGTAGCGGGTTCAAAGACATGGAGCAATTACCGACACCAGGCTGATGTGTGTCACGCCTATCAGATCATACATCAGAACGGGATTCCTGACGAACAGATTGTGGTCATGATGTATGATGACATCGCCAATAACGATGACAATCCTTATCCTGGGAACATCATTAATAGACCAAACGGACCGAATGTGTATCCAGGCGTCCCAAAAGATTACACCGGAGGGGATGTTACCCCTGAAAACTTCCTGGCTGCTCTTAAAGGAGAGAGACAAAACTCtcagaaaaaagtcatttcaagTGGGGAAAATGACACAATATTCATCTATCTGTCAGATCATGGAAGTCCAGGCATATTTTGCTTTCCTAACAACACCCTTCATGCCAATGATCTCATTGAAACCATCAAGGAAATGGCGAGGAACAAGAAGTTCTCCAAGATGGTGATATATATGGAATCCTGTTTTTCTGCATCAATGTTTACCCAACTCCCAGATAACATTCATGTGTATGCAGTGACTGCAGCGGGAGCAAATGAGAGAAGTTACGCCTGTTACTTCGATCCTGTGAGGAAGACCTATCTCGCCGATGTATTCTCAGCTCTTTGGATGTACTACACTGAAACGaatgatCTCGATAAAGTAACATTCCTGAATCAGTTTAGTTATCTTCAGCAAGCGATGAATACCTCTCACCCCTGCTGTTTTGGGGACATGACAGCTGGTGAGAAACCCATCAGTGAGTTCTTGAGAAACACTCCTCGGTCCATTCAGGAGTCAGCTAAAGCTCAGCAGCTTGTGTTGACTGATTTGACACAGGCCCATGAAGTGCCTTTCAAAATCTTGGAGAATCAAATCAACATAGAAACTGATgaagacagaaaacaagatttgaTCAGAAAACTTGATGCTCTTCATCAGATTAAAGCTAAAATTGAAGGAACAGTGGAAACTATCAAACGGCACTTTCCTGACTTTGCACATGAGGATGAAGATTATTCTCAGATGGATTTACATTCTTTCAAAACCGTAGCTGAACATTTCAGGACAACCTGCTTCGACTGGCACGAGGAAGAGTTTCAGATGGccttgtcacacacacacgtgttcgCTCGTCTCTGTGCTCGTGGAGTTAAAACAGAGAGGATCATAGAGGTCATAACAAAGGTCTCCAGTCTCTAAATAAACAACACCTTTAAGAAGAACTTAAGAAGAAATTTAGATCCATCTCAtccatcaacaaaaaaaagagtcaaaTAAACCATGTGTCGACGTTC
>XM_043252067.1
TATTTCAACATGCCCACAGTGGCGTTGGGGTTGGAGTAAGAGCAGCGATTGGTTGAGACAAGTTACCTTGTGTGTAGtcttcatatataaaaacagtgaCGTTTAAAAAGATAAGCGCAACTGCAACCAAAGGATCATCTGACAGTCTATACAGACTTTGCTCTTAAGATGGCGGCAAATGGAAAACATTGGGTGATGCTTGTAGCGGGTTCAAAGACATGGAGCAATTACCGACACCAGGCTGATGTGTGTCACGCCTATCAGATCATACATCAGAACGGGATTCCTGACGAACAGATTGTGGTCATGATGTATGATGACATCGCCAATAACGATGACAATCCTTATCCTGGGAACATCATTAATAGACCAAACGGACCGAATGTGTATCCAGGCGTCCCAAAAGATTACACCGGAGGGGATGTTACCCCTGAAAACTTCCTGGCTGCTCTTAAAGGAGAGAGACAAAACTCtcagaaaaaagtcatttcaagTGGGGAAAATGACACAATATTCATCTATCTGTCAGATCATGGAAGTCCAGGCATATTTTGCTTTCCTAACAACACCCTTCATGCCAATGATCTCATTGAAACCATCAAGGAAATGGCGAGGAACAAGAAGTTCTCCAAGATGGTGATATATATGGAATCCTGTTTTTCTGCATCAATGTTTACCCAACTCCCAGATAACATTCATGTGTATGCAGTGACTGCAGCGGGAGCAAATGAGAGAAGTTACGCCTGTTACTTCGATCCTGTGAGGAAGACCTATCTCGCCGATGTATTCTCAGCTCTTTGGATGTACTACACTGAAACGaatgatCTCGATAAAGTAACATTCCTGAATCAGTTTAGTTATCTTCAGCAAGCGATGAATACCTCTCACCCCTGCTGTTTTGGGGACATGACAGCTGGTGAGAAACCCATCAGTGAGTTCTTGAGAAACACTCCTCGGTCCATTCAGGAGTCAGCTAAAGCTCAGCAGCTTGTGTTGACTGATTTGACACAGGCCCATGAAGTGCCTTTCAAAATCTTGGAGAATCAAATCAACATAGAAACTGATgaagacagaaaacaagatttgaTCAGAAAACTTGATGCTCTTCATCAGATTAAAGCTAAAATTGAAGGAACAGTGGAAACTATCAAACGGCACTTTCCTGACTTTGCACATGAGGATGAAGATTATTCTCAGATGGATTTACATTCTTTCAAAACCGTAGCTGAACATTTCAGGACAACCTGCTTCGACTGGCACGAGGAAGAGATGGccttgtcacacacacacgtgttcgCTCGTCTCTGTGCTCGTGGAGTTAAAACAGAGAGGATCATAGAGGTCATAACAAAGGTCTCCAGTCTCTAAATAAACAACACCTTTAAGAAGAACTTAAGAAGAAATTTAGATCCATCTCAtccatcaacaaaaaaaagagtcaaaTAAACCATGTGTCGACGTTC

Function

GO:

id name namespace
GO:0006950 response to stress biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043252066.1 True 1469 mRNA 0.42 14 17802393 17805778
XM_043252067.1 False 1463 mRNA 0.42 14 17802393 17805778

Neighbor

gene id symbol gene type direction distance location
LOC122354584 si:ch211-232b12.5,LOC107727806,LOC107655055,LOC107562773,LOC107749476,LOC107599616,LOC107685688 coding downstream 109712 17682060 ~ 17692681 (-)
LOC122353782 LOC107727791,LOC107581429,LOC107691380 coding downstream 212170 17578325 ~ 17590223 (-)
LOC122353607 kbtbd8,LOC107600285,LOC107753780,LOC107557775,LOC107729395,LOC107656060,LOC107699793 coding downstream 347619 17449267 ~ 17454774 (-)
suclg2 suclg2,LOC107753779,LOC107729402,LOC107699794,LOC107656059 coding downstream 618274 17096321 ~ 17184119 (-)
lrig1 lrig1,LOC107753782,LOC107716980,LOC107557776,LOC107600281 coding downstream 810123 16958903 ~ 16992270 (-)
LOC122354072 NA coding upstream 4142 17809920 ~ 17813328 (-)
eogt eogt,LOC107729408,LOC107558884 coding upstream 246235 18052013 ~ 18064487 (-)
tmf1 LOC107600287,LOC107753777,LOC107656057,LOC107729398,LOC107696823,LOC107558889 coding upstream 259150 18064928 ~ 18074537 (-)
uba3 LOC107753775,LOC107656056,LOC107558885,LOC107729399,LOC107696817 coding upstream 269812 18075590 ~ 18082073 (-)
cishb LOC107753774,LOC107600289,LOC107656055 coding upstream 276953 18082731 ~ 18085939 (-)
G82628 LOC107738115,LOC107654540 non-coding downstream 91587 17710451 ~ 17710806 (-)
G82619 NA non-coding downstream 107885 17693919 ~ 17694508 (-)
G82606 NA non-coding downstream 159866 17634803 ~ 17642527 (-)
LOC122354623 NA non-coding downstream 159866 17641036 ~ 17642527 (-)
G82577 NA non-coding downstream 239383 17562141 ~ 17563010 (-)
LOC122354075 NA non-coding upstream 13124 17818902 ~ 17819459 (-)
LOC122353822 NA non-coding upstream 307570 18113348 ~ 18122237 (-)
G82753 LOC107600292,LOC107656050,LOC107746889 non-coding upstream 320210 18125988 ~ 18133130 (-)
G82918 NA non-coding upstream 803946 18609724 ~ 18610059 (-)
G82932 psmd6,LOC107696848 non-coding upstream 857643 18663421 ~ 18664566 (-)
LOC122353787 prkd2,LOC107728165,LOC107699186,LOC107699228,LOC107752286 other downstream 30783 17742916 ~ 17771610 (-)
LOC122354587 prpsap2,LOC107720040,LOC107581734,LOC107737786 other downstream 85697 17714752 ~ 17716696 (-)
LOC122354622 NA other downstream 161496 17634806 ~ 17640897 (-)
G82590 fam120a,LOC107581418,LOC107685640,LOC107691381,LOC107749502,LOC107556189 other downstream 225409 17573602 ~ 17576984 (-)
G82588 phf2,LOC107556181,LOC107685641 other downstream 242557 17550581 ~ 17559836 (-)
LOC122354073 NA other upstream 14495 17820273 ~ 17820936 (-)
tafa4b fam19a4b,fam19a4,LOC107655986,LOC107600333,LOC107558879,LOC107696804,LOC107729393 other upstream 202587 18008365 ~ 18048123 (-)
mustn1b mustn1,mstn1,LOC103145767 other upstream 330106 18135884 ~ 18137388 (-)
fgd5a LOC107728634,LOC107600300,LOC107656043,LOC107696838,LOC107746894 other upstream 392051 18197829 ~ 18231521 (-)
trnav-aac_24 NA other upstream 764598 18570376 ~ 18570448 (-)

Expression


Co-expression Network