ghrh (LOC107718698,LOC107557909,LOC107745328,LOC107658696,LOC107560430,LOC107669017)


Basic Information

Item Value
gene id ghrh
gene name LOC107718698,LOC107557909,LOC107745328,LOC107658696,LOC107560430,LOC107669017
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056709.1
NCBI id CM032078.1
chromosome length 24513629
location 4484135 ~ 4487197 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043252096.1
tAGACTTTCTAGCTATGGGGGGATGGGGGGTATTTGGTTGGTGGGTGGTTGCAGCATagagagaggaagggagggGGAAGAGAGGGAGGTGAGGTTTTTGGTATATAAAACAAGAGGTACAAAAGAGCGATGGAAATGCCTACCTGAACCTTTTTAACTCTCTTATTCAGCATCACCTACAATGAAACCCAACCTTGAGTACAAGTGATCAACATTCCATGTCTTTGTTCATTAGACTGTCAGTGGAGCATCAACCATACAAGTGAGAATGACGCAGAGGATTGCCCTGCTATTGCTCTGCTGCctgttaacaacaacaacatcttcTCCAGTCTATCCACTTAGGTTCGGTCAGAGAGCAACTGCGATACTGATGACCTCTTCTATTGAGGATCCAATGCAATTACCAGCAGATACTTCATCCCAAACACCAGATGCTGAGTTTAGGTTTGGAAGACATGCCGACGCCATCTTTACCAATAGCTACCGAAAGGTTCTTGGTCAAATATCTGCCAGAAAATTTCTTCAAACTGTTATGGGCAAAAGACTTggACCAGAAACTCAAAACTATGTGAAACGCCAGTCAGGCATATATGGAGACACCTTCAAGCAAGACGTGGATATGGATGTCATTGAGAGGGAACAAAGCTACAGAGAACCACAAAGACTTAAGTTCTCAGTAGTTACATAATAAcacgaataaaaaaaactgtgaacaGTTTTTTGCATTTGCCACATTTTACACTGGATTATTAAAACTCATTACACTCTTCATATAGTTCTTTTGcgttttttgtgtattttcacaGGAATCAGGAGTccctatttaaaaatacacaaacaagtACATATGGTTGTATAGTGGTATACAGGGCCATCGCTAGGAATTCTGGGCCCTGTGCACTGAATTTGCTATGTTGCTGggtttaaaatgttaccaaaccGTTTTGGTTACCCTTTACTTCTACTGTACGAACAAACTTatgttaatttttgggtgaatctccatttaagtgtattatttgtaaataagtTCCTAATTTAAATAAGAT

Function

NR:

description
VIP peptides-like

GO:

id name namespace
GO:0007165 signal transduction biological_process
GO:0005576 extracellular region cellular_component
GO:0016608 growth hormone-releasing hormone activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043252096.1 True 1052 mRNA 0.40 5 4484135 4487197

Neighbor

gene id symbol gene type direction distance location
pank4 pank4,LOC107742899,LOC107557906,LOC107745330 coding downstream 29699 4436874 ~ 4454436 (-)
draxina LOC107560421,LOC107745332,LOC107669000,LOC107557905 coding downstream 48099 4418920 ~ 4436036 (-)
LOC122354543 agtrap,LOC107745345,LOC107669010,LOC107742911,LOC107557898,LOC107658604,LOC107560425,LOC107560418 coding downstream 72045 4405965 ~ 4412090 (-)
ctbs ctbs,LOC107742908 coding downstream 79962 4400828 ~ 4404173 (-)
uox uox,uric,LOC107669002,LOC107560424,LOC107658581,LOC107742901,LOC108430123,LOC103030682 coding downstream 100182 4381167 ~ 4383953 (-)
LOC122354090 LOC107658671,LOC107718693,LOC107557899 coding upstream 10363 4497560 ~ 4509180 (-)
LOC122353703 LOC107712987,LOC107746004,LOC107701987,LOC107592853,LOC107735212,LOC107706548,LOC107557400 coding upstream 723585 5210782 ~ 5212158 (-)
aldh4a1 aldh4a1,LOC106582961 coding upstream 731036 5218233 ~ 5229330 (-)
iffo2b iffo2,LOC107557407 coding upstream 756410 5243607 ~ 5273639 (-)
akr7a3 akr7a3,akr7a2,LOC107712983,LOC107657980,LOC107582419,LOC107557399 coding upstream 792270 5279467 ~ 5284046 (-)
G79256 NA non-coding downstream 14854 4464787 ~ 4469281 (-)
G79236 NA non-coding downstream 83545 4399506 ~ 4400590 (-)
G79227 NA non-coding downstream 95396 4388101 ~ 4388739 (-)
G79172 NA non-coding downstream 108742 4374648 ~ 4375393 (-)
G79126 NA non-coding downstream 372065 4109104 ~ 4112070 (-)
LOC122353716 NA non-coding upstream 674832 5162029 ~ 5164464 (-)
G79327 LOC107393734 non-coding upstream 684578 5171775 ~ 5172519 (-)
G79329 LOC107660256,LOC107566921 non-coding upstream 694099 5181296 ~ 5181698 (-)
LOC122354468 NA non-coding upstream 706815 5194012 ~ 5195326 (-)
G79361 NA non-coding upstream 752317 5239514 ~ 5240712 (-)
si:dkey-197i20.6 si:dkey-197i20.6,LOC107745350,LOC107710445,LOC107658773,LOC107669007,LOC107592569 other downstream 518344 3961981 ~ 3965791 (-)
G79085 zgc:113223,LOC107745344,LOC107698001,LOC107556176 other downstream 569500 3913248 ~ 3914635 (-)
LOC122354343 cpne5b,LOC107680428,LOC107714485,LOC107555996,LOC107699334,LOC107751002,LOC108436414 other downstream 649212 3813505 ~ 3834923 (-)
G79003 NA other downstream 943080 3540001 ~ 3541055 (-)
cdab cda,LOC107714500,LOC107751011,LOC107572847,LOC107680435,LOC108436250,LOC105898129 other downstream 1227923 3253863 ~ 3256212 (-)
mmel1 mmel1,LOC107712974,LOC107756657,LOC107654428,LOC107702001,LOC107592889 other upstream 1251819 5739016 ~ 5765140 (-)
G79565 NA other upstream 1608936 6096133 ~ 6096480 (-)
vamp3 vamp3 other upstream 2326428 6813625 ~ 6847790 (-)
phf13 LOC107756642,LOC107751178,LOC107582403 other upstream 2644381 7131578 ~ 7141236 (-)
LOC122354641 svbp other upstream 2666268 7153465 ~ 7155275 (-)

Expression


Co-expression Network