LOC122354143 (pfklb,pfkl,LOC108444469)


Basic Information

Item Value
gene id LOC122354143
gene name pfklb,pfkl,LOC108444469
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056709.1
NCBI id CM032078.1
chromosome length 24513629
location 11512333 ~ 11523658 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043252192.1
ttaatataatgtgcAGCTGTTTCACTCTTTAATATCTTTCATGTTTATTCTTTACTGTGTTCGTCTGTCTTCAGTCATCAGAGGACGTTTGTTCTGGAGGTGATGGGGCGTCACTGCGGGTACCTGGCGGTGGTCTCTGCTCTGGCGTCGGGAGCAGACTGGCTCTTCATCCCCGAGGCTCCTCCGGAGGACGGCTGGGAGGATCACATGTGTGCTCGACTCGGAGAGagcCGCAGTAAAGGCTCTCGTCTGAACATCGTGATCATCGCAGAAGGAGCCATCGACAAACACGGCCAGCTGATCTCCTCCAACTACGTGAAAGACctGGTGGTTCAGCGGTTGGGTTACGACACGCGGGTCACCGTCCTGGGTCACGTTCAACGAGGAGGAACGCCGTCTGCCTTTGATCGCGTTCTGagcAGTAAGATGGGTGTGGAGGCGGTGGTGGCTCTGCTGGAGGCGACCCCTGAGACCCCGGCCTGTGTGATCGGTCTCTCTGGGAATCAGGCCATGCGTCTGCCGCTCATGGAGTGTGTGAACATGacGAAAGAGGTTCAGAAAGCTATGAACGAGAAGAGGTTTGAGGAGGCCATCCAGCTGCGTGGAAAGAGTTTTGAGAACAACTGGAACACGTACAAGCTGTTAGCTCACCAGAAGCCAGCTCTGTCCAAGAGCAATCACTCGATGGCGATCCTGAACGTGGGTGCTCCGGCCGCAGGGATGAACGCCGCTGTGAGGTCCGCGGTTCGAGTCGGGCTCGCTCAGGGTCACAGGGTCTACACGGTCCACGACGGCTTCGAGGGTCTGGCCAAAGATGCGGTGGCTGAGGTTCACTGGCATGATGTGGCTGGATGGACGGGGCAGGGAGGATCACTGCTGGGCACCAAACGaaCTCTTCCAAACTCCTGCATGGAGAACATTGTCACCAATATCGGAAAATACAACATCCAGTCACTGCTGGTGATTGGTGGATTTgagGCGTATGAAGGAGTTCTTCAGCTGGTTGAGGCTCGAGGTCGTTATGATGAGCTGTGTATCCCTATGTGTGTGATTCCTGCCACCATCAGCAACAACGTGCCAGGCACAGACTTCAGTTTGGGAGCAGACACGGCTGTGAACGCTGccatggagAGTTGTGATAAAATCAAGCAGTCTGCGTCTGGAACCAAGCGGCGCGTCTTCATCGTGGAGACCATGGGCGGATACTGCGGTTACCTAGCAACCACCACCGGCATCGCCGTGGGAGCAGACGCCGTCTACATCTTTGAGGAGTCGTTCAACATCCGCGAGCTGGAGaCGAACGTGGAGCATCTGACGGAAAAAATGAAGAATGATATTCAGAGAGGTctagtgttgAGGAATGAGAAGTGTCACAAGCACTACACCACTGACTTCATCTACAATCTGTACTCGGCCGAGGGCAGAGGTGTGTTCGACTGCAGGGTCAATGTCCTGGGTCACCTGCAGCAGGGCGGCGTTCCCACTTCGTTTGACAGGAACTTTGGCACCAAGCTGGGAGTGAAGTCGGTTCTGTGGCTCACAGAGAAGATGAACGACACGTACAGACAGGGCCGTGTGTTTGCGAACGCTCCTGATACGGCCTGCGTGATCGGCATGAAGAAGAAGGTGATGTCGTTCAGCCCCGTCACTGAACTCAAAGCACACACCGACTTTGAacacCGGATGCCGAAGGAGCAGTGGTGGCTCAATCTGCGTCCCATGTTGAAGATGTTGGCCAAATATCAGACCAGTTTTGACGAGTACGTGACCGGAGAGATCGAGCATGTGACGCGCCGCTCGCTCAGCGTGGAGACGGGCTTCtgatcttcatcatcttcttcatcatcacacattAACCTCTGAGCCCTAGAGTCCTCTCTCATCCTCGCTGTGTTCTGCGGTGCCTTTGTCTTGTATTTATTAGTTTCTAACCACTGATctgttgtaatattttcttCATGTTAGTCTTTATAGTTCAGTGATTGTGAGGAGTTAGATTTTTGGACACAGTCTTATCTCTGTTGactgatttagtttttctggCTGTCGTTTGATCCGCTCTgattatatttgtgtataatcttgttttctgtaacTATTTTGGCTGtcgtttgtttctttattccagaattgttgatgtgt

Function

symbol description
pfklb Predicted to enable several functions, including 6-phosphofructokinase activity; anion binding activity; and identical protein binding activity. Predicted to be involved in canonical glycolysis; fructose 1,6-bisphosphate metabolic process; and fructose 6-phosphate metabolic process. Predicted to act upstream of or within glycolytic process. Predicted to be located in cytoplasm. Predicted to be part of 6-phosphofructokinase complex. Predicted to be active in membrane. Is expressed in liver; male organism; nervous system; somite; and yolk syncytial layer. Orthologous to human PFKL (phosphofructokinase, liver type).
pfkl Enables several functions, including 6-phosphofructokinase activity; anion binding activity; and fructose binding activity. Involved in several processes, including fructose 1,6-bisphosphate metabolic process; fructose 6-phosphate metabolic process; and glycolytic process. Located in cytosol; extracellular exosome; and membrane. Part of 6-phosphofructokinase complex.

NR:

description
phosphofructokinase, liver b

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043252192.1 True 2142 mRNA 0.52 17 11512333 11523658

Neighbor

gene id symbol gene type direction distance location
orc2 orc2,LOC107702034,LOC107702742,LOC107564576,LOC107740071,LOC107564577 coding upstream 12411 11486516 ~ 11499922 (+)
ldb1b LOC107702035,LOC107564569,LOC107713246,LOC108444470,LOC107700700,LOC107567630 coding upstream 26851 11470319 ~ 11485482 (+)
cant1b cant1b,LOC107702024,LOC107700370,LOC107567625 coding upstream 77809 11424607 ~ 11434524 (+)
afmid afmid coding upstream 88119 11417605 ~ 11424214 (+)
syngr2b syngr2b,LOC107702021,LOC107713240,LOC107564563,LOC107700198 coding upstream 107784 11397046 ~ 11404549 (+)
opn6a LOC107740064,LOC107567633,LOC107702020 coding downstream 16020 11539678 ~ 11547713 (+)
map1lc3c map1lc3c,LOC107701141,LOC107702025 coding downstream 74132 11597790 ~ 11599698 (+)
tbce LOC107715672,LOC107661157,LOC107713241,LOC107574186,LOC107701315,LOC107740075,LOC107564754 coding downstream 182450 11706108 ~ 11715351 (+)
si:ch1073-365p7.2 NA coding downstream 259001 11782659 ~ 11794097 (+)
mfn1b mfn1b,LOC107661155,LOC107701405,LOC107706807,LOC107552408,LOC108443893,LOC108270971 coding downstream 271877 11795535 ~ 11811706 (+)
G80809 NA non-coding upstream 439 11511474 ~ 11511894 (+)
G80808 NA non-coding upstream 3280 11508000 ~ 11509053 (+)
G80804 NA non-coding upstream 40032 11471971 ~ 11472301 (+)
G80668 NA non-coding upstream 60195 11449049 ~ 11452138 (+)
LOC122353945 NA non-coding upstream 64812 11443640 ~ 11447521 (+)
G80814 NA non-coding downstream 25957 11549615 ~ 11555713 (+)
G80819 NA non-coding downstream 33304 11556962 ~ 11559047 (+)
G80825 NA non-coding downstream 47444 11571102 ~ 11571431 (+)
G80860 NA non-coding downstream 159266 11682924 ~ 11683244 (+)
G80861 NA non-coding downstream 159802 11683460 ~ 11683944 (+)
LOC122354145 pfkl,pfklb,LOC107564579,LOC108444469 other upstream 4562 11505653 ~ 11507771 (+)
G80761 NA other upstream 285711 11222347 ~ 11226622 (+)
G80638 NA other upstream 850363 10641132 ~ 10661970 (+)
G80551 LOC107659525,LOC107581741,LOC107718227,LOC107685975,LOC107573079,LOC103355429 other upstream 1041146 10466622 ~ 10471187 (+)
pik3ca pik3ca,LOC107574159,LOC107685965 other upstream 1972212 9521798 ~ 9540121 (+)
rpl37a rpl37a,RPL37A,zgc:171772,LOC107564751,LOC107567628 other downstream 1365 11525023 ~ 11527042 (+)
eif4a3 eif4a3,LOC107702040 other downstream 5061 11528719 ~ 11535114 (+)
LOC122354243 irf2bp2b,LOC107713243,LOC107564749,LOC107567632,LOC107683260,LOC107740065 other downstream 56368 11580026 ~ 11672957 (+)
tomm20b tomm20b,tomm20,LOC107740066,LOC107701232,LOC107661159,LOC107713233 other downstream 174666 11698324 ~ 11700214 (+)
LOC122353861 gpr137b,LOC107740081,LOC107558369,LOC107703026,LOC107713226,LOC105890320,LOC101884293 other downstream 228887 11752545 ~ 12870121 (+)

Expression


Co-expression Network