myom2a (LOC107674554,LOC107680534,LOC107597144,LOC107753884,LOC107718897)


Basic Information

Item Value
gene id myom2a
gene name LOC107674554,LOC107680534,LOC107597144,LOC107753884,LOC107718897
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056709.1
NCBI id CM032078.1
chromosome length 24513629
location 15499114 ~ 15521716 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043252257.1
CAGGAGCTTTCCAACTGCTCTCAGGCTGCTCTTCCAACACTCAAAGCTCTTCTTTTCTCTTGGGGTCTTTTTCAGAGTGTTCCCGACATGCCTGCGAAGGGCGTTACACTTTATCGGCAGGAGCAAACGCAACAACAAAGCTCAAAACATGTCGTCCAGTACTCAAGGAAATCAAGCTCTCAGGTAGTGAAGAAGGAGCAGGTCCAAGCCTCTGAGGCTATGGCAGAACAAGCCTACACAGTGCCAACCTTCAGGGAGAGGGCTCCTGAAGGCATGCAGGAGTATCAGAGAATGGCAGCTCACTTTGGAAGAGATTTGGTTCAGCTTCAGCAGGAGCTGCACAGGATGAAAGTGGCCACAAAGGAGCAAGTGGAAAATATTGAGATTACTAGAGAGGTGAAGGGAATGATGCCTTTGAGGAAGGATTATCCTGCTGAGGTTCCCAAAGCACCGGACTTCCTGGTCAGCCTGAGAGCTCACACAGTTTGGGAAAAGACTCCCGTCAAGCTGTTCTGCACCGTCTCCGGCCAACCCAACCCTATTGTCAAATGGTATAGGAATAATGTTGCCATTGAACCATTGAGTGCTCCTGGAAAGTACAAAATTGAGAACAAGTACGGGGTTCACAGTCTGATTATTAGCAGATGTGCAGCCACTGACTCCGGAGTGTACAGTGCTGTGGCCACCAATCCCCATGGAAAGGCCACTTCCAAGGCTACTGTGTGTGTCAGGAGGCCACTAGGGGGAGGAGAGCTCTCCCATCTGCCAGGGCAAGCTCCTCTGTTCGGCATTCATCCCAGCAAGCTTGAGGTGACCCTGCTGGAGTCATTCGTGACGTTCGGTACCGAAGGAGAGTCTGTCAGTCTGGTGGCTAACATAGTGGTGGTCCCTGATCTGCCAAACCTGCCCCCCGAGGCCATGTGGTACAGAGATGataCTTTGCTAATGTCATCCAGGTGGGCTGAGATGTCTGTCGGTGGTGGGGTCGCCAAGCTCACACTTCCTCACCTGAACAAGGATGATGAGGGTCTTTACACGCTTCGCATTTGGACCAAGGATGGAACCGCTGAACACAGCGCATACCTGTTTGTGAAAGACGCCACTCCGACAGTGTCTGGTGCCCCTGGAGCCCCCATGGATGTTAAGGTCTTTGATGTCAATGCAGATTACGTCCTGGTCTCTTGGAAACCTCCAAACACCACCCATGAGGCTGCCATCACTGGATACTTTGTGGACAGACGCAAATCAGGAACTAAGGACTGGGTCCAGTGCAATGACTCCCCTGTGAAAGTGTGCAAGCTGCCCGTCCACGGCCTGACCGAAGGGGCTTCCTATCACTTCAGAGTGAGGGCTGTGAACAAAGATGGCATCAGTCTGCCCTCCAGGATGTCCTCTGGAGTGACCGCTGGACAGGTGGAGAGTGATGTGGAAGTGATTAAAATCGAAGGGAAATATGACATTGCAATTCGACAGGAGGAACTACAAGGAGTGTATGTAACAATACCAGGTCCACCCACCAATGTGCATGcatcagaaataaacaaaacatacattgtTCTGAGCTGGACACCACCCAGCCCTCGTGGACGGGCACCTGTGTGGTACCTCATTGAGAAGTGTGTAGGTGACAGTCACGTCTGGCAGAGAGTCAACACTGCGGTCCAGCTACGATCTCCCCGTTACCCTGTTTACGATATGGAGGACAAGAAATCTTACCGTTTCCGCGTAATCACTGTCAACAAGTATGGTTCGAGTGAGCCATCAGAGCCCACGGCACCCATCCAAAAGGTGGACCCTTATGGTGTTGTTTCGAATAttgGTGTCCCCTCTGCCCCAGGAGTGGTGATTGCCtccagaaacactaaaacttcTGCTTTTGTGCAATGGGAGGCTCCGAAACATACAAACAACCTCATGGGTTACTATGTGGATGCTTCTCTGGTTGGCTCCAAGAAATGGTTCCCTTGCAACCACAGGCCTTACAAACACACCAGGTTTGTGGTCCATGGTTTGATCCCTGGAGATACGTATGTCTTCCGTGTGCAAGCCGTGAATGCTTACGGGTTGAGTGAAGAATCGCAGGAATCCGCTCCTCTCTTCATTGATGCTGCTCTTTTTGGGGCTGTGGAGTATGCTACTCCCTCCGCCCCATACGGCGTCAGTCTCCTGAACTGTAATGGATCCTCCATGACCCTGGCCTGGAAACGCCCCAAAAACACAGGCGGCTCTAAGATCACATCTTACTACCTGGACAAGCGTGAGGCGGGATCAGTCGACTGGAAGGAGGTTAGCCCCAGTCCGGCTGTCCACAGGACCTTCACGGTGGAGAATCTGAGCAGTGGAGTTTTCTACGAGTTCAAGATACAGGCTGCTAACTTGGCCGGAGTTGGCCTGCCGTCTGAACCCAGCAAAGCTTTTGCCTGTGAGGCCTGGACAATGGCTGAACCTGGCCCAGCGTATGACATTAGTTTCTGGGAGGTGCGTGACACCTCTGTCCTGGTGCAGTGGAAGCCCCCGGTGTACAGCGGAGATTGTCCCATCACTGGCTACTTTGTGGACATGGCTAAGAAGGGCTCTTCAGATTTCGCCGCTGTGAACGCGGAGCCAATTGCGCATTGCTACTTGAAGGTGGCTGGACTAGAGACTGGAGCATCATATGTGTTCAGAGTCCGGGCTGTGAATGCTAAAGGTGTTGGAAAAGCCTCAGATGTGTCCGATCCCGTATGTGCAAAAGCTCTGCCAGGTACAAAGGAGATTGTATGTGGTGTGGATGAAGAAACCGGAGACATTTTCTTAAACTTTGAAGCTTGTGAAGTTTCCGAGACTTCTAAGTTCGCATGGTCAAAGTCCTACAAAGAGATCACTGAATCAAGCAGGGTCTCCATCACATCCTCTGGAAGGCAGTCTAAGCTGACGTTTGTAAACGCTGAGAAGGAGGATTTGGGCGTCTACTCTGTCGCGGTGACTgacacagatggcgtttcttcCAGTTACTCTGTCAATGAAGAAGAGCTCAAAAAAATGCAGGAGCTGAGCTACAACATCAAACATCCCATTGTCCCGTTGAAGACTGAGCTGAATTATGAGATTCTGGAGAAGGGTCACGTGCGTTTCTGGGTGCAGGCTCTGAAGTTGTCCTCCTCTGTCAACTACAGGTTCATCGTCAACGATAAAGCCATCACGAGTGCTGAGGGTTACAAAATCAGCCATGATGTTTCTACTGGAATCATCCAGATGACTATTGAGCACTTCACCAAGGCCAATGAAGGCACTTACACCATTCAGATCAGCGATGGCAAGGCCAAAAGCCAAAGCTCACTGGTTCTTGTGGGAGACGCATTCAAAGTTGCTCTGAAGGAAGCTGACTTCCAGAGAAAAGAGCACATCAGAAAGCAAGGCGCTCACTTCTCAGAGTACCTGTCTTTCCATGTGACAGACGACTGCACAGTGATGCTTGTGTGCAAGCTGGCCAATGTGAAGAAAGAGACAACATTTACCTGGTTTAAAGAGGATGAAGAGATTACTGTTGATGTTCCACCAAATCCAATGTCTGGATCTTGCTCTCTTCCAATCCCCATGTTCTCAAGAAAAGACCAGGGAATTTACAAAGCTGTACTGGGTGATGACCGTGGGAAAGACACTTCTGTCTATGATATTTCTGGCAAAGTGTTTGAGGACATCATCAATGCTATCGCCAGTATTGCTGGTTCCTCTGCCTCTGACTTGGTTCTTCAGTGCACACCAGAGGGTATCCGACTGCAATGTTACATGAAGTACTACACAGAGGAGATGAAAACTAGCTGGTTTCATAGAGAGAGTAAGATCTCCTCCTCAGAAAAGATGAGGATCGGAGGCACATCTGAGATGGCCTGGATGCAGATCTGTGAGCCCACTGATAAGGAAAAGGGTCATTATACCATTGAGATTCATGatggaaaaaaatcacactCTCGCACCTTTGACCTTTCTGGACAAGCATACACTGATGCCTATGCTGAGTTCCAGAGACTTAAAGCTGCCGCCTTTGCTGAGAAGAACCGTGGTAGAGTGGTAGGTGGCCTGCCAGATGTTGTCACCATTATGGAGAAGAAGAGCCTGAGTCTTACTTGCACAGTGTGGGGTGACCCCAACCCAGAGGTCACCTGGTTTAAGAATGAGCAGGAGATTGTGTCCGACGACCGCTACAAGATCACCTTCGAGGGTGGCAAGTTCGCCAGCCTCACTATCCATAGTGTGTACGTGGAAGATTCTGGAAAGTACAGCATCAATGTACGGAACAAGTACGGAGGGGAATTTGTGGAGATCACAGTCAGTGTGTATAAGCAAGGAGACGATATCCCAGAGCCCAAACTGGGACAGATGGCTAAGCCCGTCGCTACCCCAAAGCCAGCTACACCTGCTCCACAGCCTACAAAGGCCCCGACTCCTGCGCCCTCCATGAAGTCCCCAACCCCTACTCCACCTCCCTCTGTGAAATCTCCCACTCCAACTCCAGCTCCTAAATCACCCACCCCACCCAGATCCATGATCCCCACCCCGCCAAGATCCATGAGATCCCCCACCCCTACTAAGAAGTAACTAGTAAACTATGGCTTGAATACATGAAGTATTCATAGAGTTGATGTATAGTCTGCAGTAGTCTCAAAATCAGGATCTGTCACTGGTACAGCCAGCGAAGTTAAACATACTTACAGTAAAATATCTGAGAGTCCTTTAAGATCAGTGTCAGACTCCAGTGTACCGGTTTTTATCTCTTAAATAGAATCAAAAAAGTAGGAAGATTGTGTTTCATGTATTGCTTCTGCAGCCAAATGATAAAGTTGCTAAAGTGGTGTTGGGCAAGTTAAAATCATCCCAAAGGCTACCGCTGTCTTATTTGTCTTTGTTCTGTACCCTCCAAATGCTTGTTGGTGCCAATAAAAATCAGCCGTCTCCTCTCTGGAGTGGA

Function

NR:

description
myomesin-2-like isoform X2

GO: NA

KEGG:

id description
K24495 MYOM; myomesin

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043252257.1 True 4948 mRNA 0.50 41 15499114 15521716

Neighbor

gene id symbol gene type direction distance location
ptp4a1 ptp4a1,LOC107563655,LOC107597142 coding downstream 5497 15489620 ~ 15493617 (-)
hyls1 si:dkey-23f9.4,LOC107680541,LOC107597141,LOC107674570,LOC107563627,LOC107718881,LOC107753882 coding downstream 24876 15467970 ~ 15474238 (-)
krt98 LOC107562078,LOC107680525,LOC107753857,LOC107563686,LOC107718877,LOC107674549 coding downstream 69044 15423152 ~ 15430070 (-)
jupa jupa,LOC107562072,LOC107753847,LOC107680531,LOC108438667,LOC106564751 coding downstream 127432 15349738 ~ 15371682 (-)
gpr179 LOC107753843,LOC107718864,LOC107680456,LOC107562070,LOC107563489,LOC106564745 coding downstream 216270 15267975 ~ 15282844 (-)
ly75 LOC107680532,LOC107674542,LOC107563496,LOC107597186,LOC107753885,LOC107718898 coding upstream 1627 15523343 ~ 15550688 (-)
itgb6 itgb6,LOC107747010,LOC107680548,LOC107597145,LOC107674564,LOC107718899 coding upstream 55890 15577606 ~ 15590464 (-)
zgc:193807 NA coding upstream 101206 15622922 ~ 15624013 (-)
LOC122353771 NA coding upstream 108414 15630130 ~ 15631268 (-)
LOC122353685 NA coding upstream 124845 15646561 ~ 15648345 (-)
G82214 NA non-coding downstream 1010 15497650 ~ 15498104 (-)
G82216 NA non-coding downstream 27425 15471306 ~ 15471689 (-)
G82211 NA non-coding downstream 48715 15444522 ~ 15450399 (-)
G82160 krt94,LOC107753855,LOC107680518,LOC107562075,LOC107674540,LOC107718880,LOC107563560 non-coding downstream 52277 15420805 ~ 15446837 (-)
G82190 LOC107562076,LOC107753881,LOC107680504,LOC107718872,LOC107674524,LOC107563570 non-coding downstream 156696 15337927 ~ 15342418 (-)
G82260 NA non-coding upstream 91430 15613146 ~ 15613851 (-)
G82286 LOC107593138,LOC107655962,LOC107753871 non-coding upstream 195881 15717597 ~ 15732758 (-)
G82294 NA non-coding upstream 207073 15728789 ~ 15729815 (-)
G82296 NA non-coding upstream 212841 15734557 ~ 15738741 (-)
G82311 NA non-coding upstream 267829 15789545 ~ 15792089 (-)
LOC122354564 NA other downstream 97423 15400918 ~ 15401691 (-)
LOC122354561 NA other downstream 263678 15233933 ~ 15235436 (-)
G82067 NA other downstream 285056 15204961 ~ 15214058 (-)
G81866 NA other downstream 962722 14534718 ~ 14536392 (-)
chrna4b chrna4b,LOC107753893,LOC107562063,LOC107655994,LOC107665840,LOC107602782,LOC107723056 other downstream 1047374 14442601 ~ 14451740 (-)
pla2r1 pla2r1,LOC107674555,LOC107564855,LOC107747570 other upstream 30640 15552356 ~ 15577065 (-)
LOC122354045 NA other upstream 73849 15595565 ~ 15614937 (-)
LOC122353775 srsf1,srsf1a,LOC107704814,LOC102236359,LOC103148541,LOC106947524,LOC106593141,LOC107661108,LOC107731957,LOC108431323,LOC107554282,LOC107727915,LOC108278759 other upstream 1069090 16590806 ~ 16593930 (-)
LOC122353776 NA other upstream 1082288 16604004 ~ 16606580 (-)
LOC122354244 rab7a,rab7,LOC102230535,LOC108254780,LOC106583206,LOC105017191,LOC106582926 other upstream 1257196 16778912 ~ 16912574 (-)

Expression


Co-expression Network